DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43340 and gpatch3

DIOPT Version :9

Sequence 1:NP_001246184.1 Gene:CG43340 / 35698 FlyBaseID:FBgn0263077 Length:3213 Species:Drosophila melanogaster
Sequence 2:XP_005158511.1 Gene:gpatch3 / 791148 ZFINID:ZDB-GENE-070112-902 Length:688 Species:Danio rerio


Alignment Length:423 Identity:85/423 - (20%)
Similarity:160/423 - (37%) Gaps:102/423 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1097 NVPESQEISEEAVSSIETISPPF---STEVAVPVKSIDVETLES----P------GATEPASVEQ 1148
            :|.:|::.:|..:..:..::||.   |..|..|| |:.::.::|    |      |.|.|.:...
Zfish   138 HVAQSEQFTENDLRGLPELNPPALMPSGNVGTPV-SVFLQLIQSCRLPPRLIRKLGLTFPKTGSN 201

  Fly  1149 SETVDIAPEIHN---VNPSEHCESVPEANVNIPSMEIV--PLENSPSMEIQDE-LPQTLESSSVD 1207
            ....::..:.||   |.|:|  |||..|.    .:||.  ...::|:...:.: .|.||..:...
Zfish   202 RRYGNVPYQYHNTRVVTPAE--ESVFTAG----GVEIKGHAQRDTPTTSHRKQGKPTTLYRTQET 260

  Fly  1208 PQEVQPVAVDPLPVTEVVPDVVPVEPPSIVETDPETREIENLDPMEIKPDPESSTIENLTPIDSL 1272
            |...| ...|...::..:.|.     |:..:|:.:|....    .:|:..|.:|..:..||..| 
Zfish   261 PTASQ-AKQDTPTISLTIQDT-----PTTTQTNQDTPSTS----CKIQDTPTASQRKQDTPTTS- 314

  Fly  1273 AAVESIDVKNQINSSNHMEQQNISIEPQPTV---PMDTIQPIEIVQEVP--CNTVDLIATTEAVN 1332
               :.:|          |...:..|:..||.   ..||.....|:|:.|  ..||....||    
Zfish   315 ---QKLD----------MSTTSCKIQDTPTASQRKQDTPTTSCIIQDTPTTSQTVQDTPTT---- 362

  Fly  1333 ADHSEPGEAGLISEVLQFHSSGGDLPETDSRAIEPLPLAPPAEVIEVVPLGSAELLSPSEPTEVV 1397
               |:..:....|..:|      |.|....|...|    |.:.:|:..|..|....:|       
Zfish   363 ---SQKQDMSTTSCKIQ------DTPTASQRKDTP----PTSCIIQDTPTASQRKDTP------- 407

  Fly  1398 SPSAIALPEKPEPMENATEIEIEEMVSPTS---VEIVPTTTEDLHQAESVVETARPVSAVEEVKP 1459
             |::..:.:.|      |..:.:.:.:||:   ::..||.|:.|::     :|..|        |
Zfish   408 -PTSCIIQDTP------TTSQTKRLNTPTASRKIQDTPTYTQTLYE-----DTPSP--------P 452

  Fly  1460 IEDSTAAIDKSPQISPIEGEHSQHSEKETPESV 1492
            :...:...:...::|..:.:..:..|.|..|::
Zfish   453 VNQPSQEEESEEELSGPDDDDDRCEEWERHEAL 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43340NP_001246184.1 FYVE_BSN_PCLO 63..119 CDD:277290
gpatch3XP_005158511.1 RRM_SF 12..>31 CDD:302621
G_patch 585..631 CDD:197727
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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