DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43340 and Cp190

DIOPT Version :9

Sequence 1:NP_001246184.1 Gene:CG43340 / 35698 FlyBaseID:FBgn0263077 Length:3213 Species:Drosophila melanogaster
Sequence 2:NP_524359.2 Gene:Cp190 / 41848 FlyBaseID:FBgn0000283 Length:1096 Species:Drosophila melanogaster


Alignment Length:1221 Identity:238/1221 - (19%)
Similarity:396/1221 - (32%) Gaps:425/1221 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  1486 KETPESVEVGLDSPN--VADVITTSVEVIPTSTTAVTTSDGASTEMPEPPKIYCETAPPAAEEIE 1548
            ::|.|.|:..|..||  .|||:...|..:.|.|.....            |:|.:....|.   |
  Fly    60 EQTCEIVDDALIMPNEFQADVVVPIVNFMYTGTLEFEL------------KMYGKLLRTAK---E 109

  Fly  1549 QNETVETLSVSADTTLPEEIVSQDGNLEASEQTASIDVTFQANLNNME----SKGCVEVAVDVRE 1609
            .|.|| .|.:                |||..:|       ..|:|..:    .||.....|....
  Fly   110 MNMTV-LLKL----------------LEAHRRT-------MENVNRQQRPPSPKGIRRRTVGQPS 150

  Fly  1610 SKEDETLM---EPIAVDVAVPVEVVPQCAGVELGVSEPEEATPATNNLTSG--ENPPEEVSELVD 1669
            |...:..:   .|.:.:||.|   :.|.|..:.|      :|..|.:.|||  ...|...|..|.
  Fly   151 SGLPQQRVLGPSPQSRNVATP---IAQRANTQRG------STGNTMSRTSGGSNRSPYGDSSNVK 206

  Fly  1670 VEPRNPHEEI-----------HTDSFEKDSQKSS----------------------------DAV 1695
            .||.:|.|::           .|......|:|.|                            |..
  Fly   207 QEPTSPFEQLRKGYNNNKRPAQTSLLSPPSKKPSLEEVKEFAEQQRMRKQIAAEYGDNDPEYDGG 271

  Fly  1696 ALHEDNTKSEEKVD--PPQVAEEVAPDIITLDPPSLVELSPD-TQAMAIGNIAPFDIILEPES-- 1755
            .|::|....::..|  |||             |.:..:.||. ||..           ||..|  
  Fly   272 MLYDDVHAGDDDDDDMPPQ-------------PSTSKQQSPQGTQTQ-----------LEHGSTT 312

  Fly  1756 IVIEQPVPVVKPETIVVESDPEAIDHTALLE---------------------PSVSAEVQDKVES 1799
            |:::|..|...|..||.:|....::||.::.                     |:..|...:|...
  Fly   313 IILKQDSPSQTPTIIVKDSSNAKLNHTKIIAEVLRQYPHIVKGHKNIKLKIMPNTPAAPTEKSAP 377

  Fly  1800 AQQQVSENKSVEEDS----LKVSIGERGEIISMDPITP-----ADAVSEQNFRVEDPITSTESTA 1855
            |..:...|:|....|    |.||       ...|..||     ..|.|.|........|..:.|.
  Fly   378 ATVKPPANQSSATTSPHKKLHVS-------FKADKSTPLITAQQKAASSQQKSGTSQTTGNQGTG 435

  Fly  1856 VEVIASESINTVVEPVSVAQSPTIEDSTPEEVTQCSAVNSTDTEV-----ASAAPIQV------- 1908
                |:...||     :.||...|:..|...:....|.|:|...:     .:..||.:       
  Fly   436 ----ANPPANT-----AAAQKRRIDSKTMHALIAQGAENTTGPWLCLRCGVNGRPISIPSYRGFR 491

  Fly  1909 -------DQKIQP---------------VHVELVSQIEASDL----------QESPKDTAQVES- 1940
                   .:.|.|               :|..:..:.:...|          .:|.:...::|: 
  Fly   492 RHLINTHKETIDPALCEHCGWRSVNNRELHFHMYMEHQTKSLLYTFAECALCNQSYRTKGELEAH 556

  Fly  1941 -------DSVDQAI-LTQVSE------------------TDSIVVEPSSPVKQSEDSQGEPPGSA 1979
                   |:..|.| ..:|.|                  .|.|:.|.......|:|.:.|..|. 
  Fly   557 INEVHTDDNKQQCIYCNKVFEQELQLYRHMKSYHKEQALEDGIIDETDEEFLGSQDEEEEAEGD- 620

  Fly  1980 QNVLDVGPVEMDQSAPEE-----------VPETDPVAVEPS--VPVEEEVIEVIQPAPKEI-SDS 2030
                       ::..||:           :|.|..:.|:.:  ..::||.:|.:|...|.: :|.
  Fly   621 -----------EEQEPEQTGKVRILSDISLPATSAITVQQAQQEQLQEEDVEQVQQEVKFVGADG 674

  Fly  2031 VERTLDSLGNTDLVAEAESVDTPAENAGPEIGTSELEKELL--------VVSTTIDEQPSAVLEP 2087
            .|..|......:::::.......|...|..:..||.|.|.:        :..|..:...|.:...
  Fly   675 NEVELTDEQRKEILSQLNQQQAGATAGGVVMVLSEPEAEHVKQETDEKSLAGTEEEYDDSQIYSE 739

  Fly  2088 LVLICQAEST----------NLDH-ELPENLVPQGQSVPASLPTNLTIQTQPTDLETQPSMELIL 2141
            |......||.          ::|: |..|||:.:.:......|.:    .:|.|..::...||..
  Fly   740 LGAADSVESAKKNIADESKESIDNLEWAENLIAESEEQSNKEPKS----DKPRDDISEKLKELTG 800

  Fly  2142 Q-TETVDAEMVKPVDMGDSTVDKSQETGEMVLKLESSKWEPLEATELVTMEPSSETESTCADSKI 2205
            . ||          |..|..||....|.|:             |:||...:|    |.|..:.: 
  Fly   801 DWTE----------DENDDDVDDKPATAEL-------------ASELANKDP----EPTVHEEE- 837

  Fly  2206 YANLVPQLDSVPLSVPTELRIQPEPEEPHAFENPIPETVSSSEDLLEPAQVLIQEDPVALENLPG 2270
                    |.:.|::.:   :...|||. ..|....|:|:|::|                    .
  Fly   838 --------DDIDLALQS---LHKGPEEA-TEEKASEESVTSADD--------------------A 870

  Fly  2271 VPIVPDVHAHNFEPSPVEITSQSAD---TNAIVPVEVETIMKPETE----APSPMAVESTPDLEA 2328
            |..||::   |.:|..:::.|::||   :.|.|.::.|..::.:.|    ..||:     |..::
  Fly   871 VDAVPNI---NSQPEKMDVDSEAADEKASKAEVQIKKEAELENDQEEFIKEDSPI-----PHSDS 927

  Fly  2329 VALDTKESVPAAQA---IPVEVVPETEHLTEETKNETAKMDAEPARISVEIVQEEQPLSLGNKIP 2390
            || :.:|:|.|::.   :.:|.....:.|.:|...|..|.|.|.     :|||.|          
  Fly   928 VA-ELREAVTASEGEDDVHLEADNIRKELLDELIAEAEKPDQEK-----DIVQSE---------- 976

  Fly  2391 VENETSSA-------------PVEAPFDTVSI--PASVDSVEQKESN--------ASEEPHFGED 2432
             ||.|:.|             |.:...:.:.|  ||:..:.|..|..        ..::|:..:|
  Fly   977 -ENATTEALDRSVTDEDDLVPPTQVSTEQMEIDEPAAEKAAENNEDTRTADEKEAVEDKPNQTQD 1040

  Fly  2433 ILKNDDAILETVTANADLSSDAQLASIDQELKDPATEGIHKNTSVDSSYGD 2483
            :...:...||:..| .|.::..:.||:|            |..|:.|.:||
  Fly  1041 VTTAEKPTLESAKA-GDEATSGEAASVD------------KVKSLISEWGD 1078

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43340NP_001246184.1 FYVE_BSN_PCLO 63..119 CDD:277290
Cp190NP_524359.2 BTB 20..122 CDD:279045 22/93 (24%)
BTB 31..127 CDD:197585 24/105 (23%)
C2H2 Zn finger 540..568 CDD:275371 3/27 (11%)
C2H2 Zn finger 569..586 CDD:275371 3/16 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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