DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43340 and Leo1

DIOPT Version :9

Sequence 1:NP_001246184.1 Gene:CG43340 / 35698 FlyBaseID:FBgn0263077 Length:3213 Species:Drosophila melanogaster
Sequence 2:NP_001005548.1 Gene:Leo1 / 300837 RGDID:1549772 Length:678 Species:Rattus norvegicus


Alignment Length:600 Identity:121/600 - (20%)
Similarity:197/600 - (32%) Gaps:158/600 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1640 GVSEPEEATP----ATNNLTSGENPPEEVSELVDVEPRNPHE-------EIHTDSFEKDSQKSSD 1693
            |....||..|    :.|:....:|..|...|..|.|...|.:       |.|.|..:.|..:..|
  Rat    63 GDDSEEEGAPHHSGSDNHSEQSDNRSEASEERSDHEDNEPSDVDQHSGSEAHNDDDDDDDDEDDD 127

  Fly  1694 AVALHEDNTKSEEKVDPPQV--AEEVAPDIITLDPPSLVELSPDTQAMAIGNIAPFDIILEPESI 1756
                 ::..:|:|.....:.  :|:...|....|.....:.|.|.:.:...:             
  Rat   128 -----DEGHRSDEGSHHSEAEGSEKAQSDDEKWDGEDKSDQSDDDEKLQNSD------------- 174

  Fly  1757 VIEQPVPVVKPETIVVESDPEAIDHTALLEPSVSAEVQDKVESAQQQVSENKS--VEEDSLKVSI 1819
                      .|.....||.|.:.::|           |:.|..|....|:::  .::|..::|.
  Rat   175 ----------DEEREQGSDDEKLQNSA-----------DEEEKMQNTDDEDRAQLSDDDRQQLSE 218

  Fly  1820 GERGEIISMDPITPADAVSEQNFRVED-PITSTESTAVEVIASESINTVVEPVSVAQSPTIEDST 1883
            .|:|......|....:...:||...|| |..|.|.                     :....:|..
  Rat   219 EEKGNSDDERPAASDNDEEKQNSDDEDRPQVSDEE---------------------KMQNSDDER 262

  Fly  1884 PEEVTQCSAVNSTDTEVASAAPIQVDQKIQPVHVELVSQIEASDLQES----------PKDTAQV 1938
            | :|:.....:|.|.|       :.|||.:        ....||.::.          |.| ::|
  Rat   263 P-QVSDEDRRHSDDEE-------EQDQKSE--------SARGSDSEDEVLRMKRKNAIPSD-SEV 310

  Fly  1939 ESDSVDQAILTQVSETDSIVVE---PSSPVKQSEDSQGEPPGSAQNVLDVGPVEMDQSAPEEVPE 2000
            :||       |:|.:.::..::   .:..:....|.:.:||...|.| |...:..||...|.:||
  Rat   311 DSD-------TEVPKDNNGTMDLFGGADDISSGSDGEDKPPTPGQPV-DENGLPQDQQEEEPIPE 367

  Fly  2001 TDPVAVEPSVP------------VEEEVIEVIQPAP-------KEISDSVERTLDSLGNTDLVAE 2046
            |   .:|..:|            |:......::|.|       .|..|  |..||..|.|.|..:
  Rat   368 T---RIEVEIPKVNTDLGNDLYFVKLPNFLSVEPRPFDPQYYEDEFED--EEMLDEEGRTRLKLK 427

  Fly  2047 AESV---DTPAENAGPEIGTSELEKELLVVSTTIDEQPSAVLEPLVLICQAESTNLDHE---LPE 2105
            .|:.   ....:..|.||    .|....:|..: |...|..|...|..........||.   :.:
  Rat   428 VENTIRWRMRRDEEGNEI----KESNARIVKWS-DGSMSLHLGNEVFDVYKAPLQGDHNHLFIRQ 487

  Fly  2106 NLVPQGQSVPASLPTNLTIQTQPTDLETQPSMELILQTETVDAEMVKPVDMGDSTVDKSQETGEM 2170
            ....|||:|   ..|.||.:...||..|...|.|.|.......:.::.:.|...  |...:..||
  Rat   488 GTGLQGQAV---FKTKLTFRPHSTDSATHRKMTLSLADRCSKTQKIRILPMAGR--DPECQRTEM 547

  Fly  2171 VLKLESSKWEPLEAT 2185
            :.|.|    |.|.|:
  Rat   548 IKKEE----ERLRAS 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43340NP_001246184.1 FYVE_BSN_PCLO 63..119 CDD:277290
Leo1NP_001005548.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..373 75/397 (19%)
PHA02664 <33..183 CDD:177447 24/147 (16%)
PHA02664 <134..259 CDD:177447 27/179 (15%)
Leo1 386..544 CDD:281933 38/169 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 559..596 121/599 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 613..678
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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