DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1358 and slc49a3

DIOPT Version :9

Sequence 1:NP_001188873.1 Gene:CG1358 / 35697 FlyBaseID:FBgn0033196 Length:482 Species:Drosophila melanogaster
Sequence 2:XP_012813793.1 Gene:slc49a3 / 394873 XenbaseID:XB-GENE-5740366 Length:482 Species:Xenopus tropicalis


Alignment Length:455 Identity:131/455 - (28%)
Similarity:223/455 - (49%) Gaps:43/455 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 YKVYARRWAVLILFVFYSSSNAMQWIQYTIINNIITRYYGISDKWVDWTSMIYMILYIPLIFPGS 114
            ::.|.|||.||.:....|.:|||.||.:..:.::...::..|...|::.|::|:|:.||:.|..|
 Frog    34 FRTYKRRWFVLGVICLLSCTNAMLWISFAPVADVTASFFKCSLDVVNYLSLVYLIIAIPVGFGAS 98

  Fly   115 WFLDKVGLRITALVGIVGTCVGAWIKVFSVDPSL--------FYVSFIGQSIVALAQVCILSLPA 171
            |.:|.:||:...:.......:|:.|:..::.|.|        .|..|.|||:.|:||..:|.:||
 Frog    99 WLIDTLGLKYAIVFSSWLNMIGSIIRCGAIVPYLNPSGSYTGIYYLFTGQSLCAIAQPLVLFVPA 163

  Fly   172 RLAAVWFGPDQVSSATSVGVFGNQLGVAVGFVLPPMLVPNSPDLETVGSDLQMMFYLVAGLTSIL 236
            :||:|||...|.::|..:....|.|||.:..::.|.:|...   |.:...|.:  |.|..:.:.:
 Frog   164 KLASVWFPEHQRATANMIASMSNPLGVLLANIISPSVVTKE---EYIAHMLGI--YTVPAIAACI 223

  Fly   237 LVLMVIFFQDKPPTPPSAAQEAAQLLESSEAEQVSFMQSLKNLMTNRNFIFLLLSYGINVGVFYA 301
            |....|..: .|||||||:        :..:....|:..::.|:|||.::.|:|.:|..:|:|.|
 Frog   224 LATAGIRAK-SPPTPPSAS--------AFNSASEPFIAGIRQLLTNRAYVILMLCFGAGIGIFTA 279

  Fly   302 ISTLLNPVVLKYYPGH-EVDAGRIGLSIVLAGMLGSVVSGIVLDKTHKFKETTLAVYALSMVGMW 365
            ||:.|..::.  :.|: .:.||..|...:..|.:|:.|.|:.:|:|.||||.....:||:.:...
 Frog   280 ISSFLEQILC--FRGYSNLFAGVCGALFIFFGFIGAFVCGLYVDRTKKFKEVVKTCFALTALTSI 342

  Fly   366 IFTFTLD-TGHIAVVYLTASLLGFFMTGYLPVGFEFGAELTFPEPEGTSSGLLNASAQTFGICFT 429
            .|...:: .....:|....||||.|.....|||.|...|.::|..||:|:||...|.|..||.:.
 Frog   343 AFALVINFREQTVLVACVCSLLGLFGFAISPVGMELAVECSYPVGEGSSTGLAFISGQIQGIIYM 407

  Fly   430 LFYSEL---FTTFGD-------------IAANITMAVMLIVGTIITAI-TQSDLRRQNAQVPASG 477
            :.:.:|   |.|.|.             ..:.:.||.:...|:.|..| ..:..:|..|:|..:|
 Frog   408 ILFQKLTRPFATSGPSPCGMNQTEIYDWSTSMLVMAALCSFGSCIFIIFFHTKYKRLLAEVNFNG 472

  Fly   478  477
             Frog   473  472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1358NP_001188873.1 MFS_1 62..422 CDD:284993 109/369 (30%)
MFS 63..461 CDD:119392 120/423 (28%)
slc49a3XP_012813793.1 MFS_MFSD7 39..457 CDD:340957 126/433 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54923
OrthoDB 1 1.010 - - D425075at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

Return to query results.
Submit another query.