DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1358 and Slc49a4

DIOPT Version :9

Sequence 1:NP_001188873.1 Gene:CG1358 / 35697 FlyBaseID:FBgn0033196 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_001012017.1 Gene:Slc49a4 / 303902 RGDID:1310939 Length:478 Species:Rattus norvegicus


Alignment Length:462 Identity:120/462 - (25%)
Similarity:213/462 - (46%) Gaps:62/462 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 TPKEKEGKGLKVAGGHNPPAEGYKVYARRWAVLILFVFYSSSNAMQWIQYTIINNIITRYYGISD 92
            |.:.:|...:..|.|.:|.    :||.|||.||:||...:.:..:.|..:..|.|...:.|    
  Rat    27 TRRGREAAAVLPAAGPSPG----RVYGRRWLVLLLFSLLAFAQGLVWNTWGPIQNSARQAY---- 83

  Fly    93 KWVDWTSMIYMILYIPL----IFPGSWFLDKVGLRITALVGIVGTCVGAWIKVFSVDPSLFYVSF 153
            .:..| .:..::|:.|:    .|...|.|||.|||||.|:......:|..::...|.........
  Rat    84 SFTGW-DIALLVLWGPIGFLPCFAFMWLLDKRGLRITVLLTSFLMVLGTGLRCIPVSDLTLKKRL 147

  Fly   154 I--GQSIVALAQVCILSLPARLAAVWFGPDQVSSATSVGVFGNQLGVAVGFVLPPMLVP----NS 212
            |  ||.:..||...:::....|:..||..|:.::||::....:.||.|..|::.|::||    .:
  Rat   148 IHGGQILNGLAGPTVMNAAPFLSTTWFSADERATATAIASMLSYLGGACAFLVGPLVVPAPNGTA 212

  Fly   213 PDL------ETVGSDLQMMFYLVAGLTSILLVLMVIFFQDKPPTPPSAAQEAAQLLESSEAEQVS 271
            |.|      :.:...::.:.|...|:..::....:.:|..:||.|||.|         :.::::|
  Rat   213 PLLTAESSRDHIKDRIETVLYAEFGVVCLIFSATLAYFPPRPPLPPSVA---------AASQRLS 268

  Fly   272 FMQSLKNLMTNRNFIFLLLSYGINVGVFYAISTLLNPVVLKYYPGH--EVDAGRIGL-SIVLAGM 333
            :.:|...|::|..|:.:.|:|.|.:|||...|.:|:.::.   |.|  :||||.||. |||    
  Rat   269 YRRSFCRLLSNLRFLMIALAYAIPLGVFAGWSGVLDLILT---PVHVSQVDAGWIGFWSIV---- 326

  Fly   334 LGSVVSGIVLDKTHKFKETTLAVYAL------SMVGMWIFTFTL--DTGHI----AVVYLTASLL 386
             |..|.||.:.:...|....|.:..|      ::...| ||.|.  ...|:    ..:|.:..||
  Rat   327 -GGCVVGIAMARFADFIRGMLKLILLLLFSGATLSSTW-FTLTCLNSVTHLPLTTVTLYASCILL 389

  Fly   387 GFFMTGYLPVGFEFGAELTFPEPEGTSSGLLNASAQTF-GICF---TLFYSELFTTFGDIAANIT 447
            |.|:...:|:.||...|..:|.|||.:.|::...:..| |:..   |.:::||......:..:..
  Rat   390 GVFLNSSVPIFFELFVETVYPVPEGITCGVVTFLSNMFMGVLLFFVTFYHTELSWFNWCLPGSCL 454

  Fly   448 MAVMLIV 454
            ::::||:
  Rat   455 LSLLLIL 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1358NP_001188873.1 MFS_1 62..422 CDD:284993 101/390 (26%)
MFS 63..461 CDD:119392 107/427 (25%)
Slc49a4NP_001012017.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 120/462 (26%)
Mediates lysosomal localization. /evidence=ECO:0000250 14..15
MFS 66..449 CDD:119392 104/405 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2563
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54923
OrthoDB 1 1.010 - - D702737at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

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