DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1358 and C42C1.8

DIOPT Version :9

Sequence 1:NP_001188873.1 Gene:CG1358 / 35697 FlyBaseID:FBgn0033196 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_502341.1 Gene:C42C1.8 / 178179 WormBaseID:WBGene00016586 Length:544 Species:Caenorhabditis elegans


Alignment Length:514 Identity:123/514 - (23%)
Similarity:213/514 - (41%) Gaps:89/514 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ENSETFIATSKSTDMITPK--EKEGKGLKVAGGHNPPAEGYKVYARRWAVLILFVFYSSSNAMQW 74
            |..|....|.::.:.|.|.  :::.|.|......:.....::....||.:|:.....:.||...|
 Worm    38 EEQEDKTKTEETQEEIVPDPLKEDAKILPDLVSRSSIISAFESDGSRWFLLVSVALLNFSNTCSW 102

  Fly    75 IQYTIINNIITRYYGISDKWVDWTSMIYMILYIPLIFPGSWFLDKVGLRITALVGIVGTCVGAWI 139
            |.|..:.|.:...||  ::...|.|||||.:.:|..|.|.:...|..|.:..:...|...:||.|
 Worm   103 IAYAPVGNYVNALYG--EESAAWFSMIYMFVSVPFGFIGMYIGSKNTLNVPLIAACVLNAIGALI 165

  Fly   140 KVFSVDPSL-----FYVSFIGQSIVALAQVCILSLPARLAAVWFGPDQVSSATSVGVFGNQLGVA 199
            :..|..|.:     |.:..:||||.|:|...|:.||::::|..|.|.|.:.||::||..|.|||.
 Worm   166 RALSTQPQVDPQNRFPICLLGQSIAAMAYPFIMFLPSKISATCFPPSQRTIATTIGVMANPLGVM 230

  Fly   200 VGFVLPPMLVPNSPDLETVGSDLQMMFYLVAGLTSILLVLMVIFFQD------KPPTPPSAAQEA 258
            |..::.|::|.:|.|:            .:..:...::..:.:||..      ||.         
 Worm   231 VVNLVAPLIVQSSDDV------------WILNVILFIICFVALFFAGCSLGCLKPD--------- 274

  Fly   259 AQLLESSEAEQVSFMQSLKNLMTNRNFIFLLLSYGINVGVFYAISTLLNPVVLKYYPGHEVDAGR 323
                |:.:.:...:..|..::..|.|:..|:.:.|..:|:|.::.|::..::.....|::| ||.
 Worm   275 ----ETKQRKSNDYATSCGSVFGNLNYDILMFALGGGIGMFNSLYTMMLQMLCPSGYGNQV-AGI 334

  Fly   324 IGLSIVLAGMLGSVVSGIVLDKTHKFKETTLAVYALSMVGMWIFTFTLDTGHIAVVYL-TASLLG 387
            ..:.::..||:|:.|:.|.:|| ||       .|..:|:.:..|......|.:.:..: ..||:.
 Worm   335 CAVLMIGCGMIGATVASIYVDK-HK-------NYRTAMIVLMNFAVIFGVGFLWMSKVPNMSLIL 391

  Fly   388 FFMTGYL--------PVGFEFGAELTFPEPEGTSSGLLNASAQTFGICFTL-------------- 430
            ||::|..        |||.|...|.|:|.....|||.:....|.|.:....              
 Worm   392 FFISGAFGFCGLAAYPVGLELAIECTYPAAPEVSSGFIVLVGQLFSVLIVAIIKIGAKSLSFVDS 456

  Fly   431 -FYSELFTTFGDIAAN-----------ITMAVMLIVGTIITAITQSD---LRRQNAQVP 474
             |..|......:.|.|           ||...:||  .|:....:.|   |||:....|
 Worm   457 DFGVEACRAHAEDAINVPKNYDNPIIIITFIAVLI--AIVVWFLREDYRRLRREMTNAP 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1358NP_001188873.1 MFS_1 62..422 CDD:284993 97/379 (26%)
MFS 63..461 CDD:119392 108/443 (24%)
C42C1.8NP_502341.1 MFS 88..499 CDD:119392 109/448 (24%)
MFS_1 91..439 CDD:284993 99/383 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2563
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54923
OrthoDB 1 1.010 - - D702737at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100662
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.730

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