DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scra and CG30183

DIOPT Version :9

Sequence 1:NP_724582.1 Gene:scra / 35696 FlyBaseID:FBgn0261385 Length:1239 Species:Drosophila melanogaster
Sequence 2:NP_001137745.2 Gene:CG30183 / 37749 FlyBaseID:FBgn0050183 Length:1555 Species:Drosophila melanogaster


Alignment Length:1457 Identity:287/1457 - (19%)
Similarity:501/1457 - (34%) Gaps:449/1457 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PRSRSPGGQSAASGGGKV----VTLGKATLEA-----SPAKPLRHYTAVNKENLDMGI-EINITT 106
            |..||...:.::..||::    ::.|:.:.:|     .|.||.|.    :.::||..: :.::|:
  Fly   271 PSRRSSRSRRSSGAGGRLLQKRLSQGQVSFKARNSQLPPPKPPRR----SSQSLDGKLSQSSLTS 331

  Fly   107 DKPIGVQVEIQEQEVTDDEEQAEGGALNPLLEAEPV--------NQPLARLRDTSRSRLQRMGAL 163
            ..|     .::|.|...||...:.|...|..:.||.        :.|:|.:......|..:....
  Fly   332 TNP-----SVREAERVLDEFLRKRGVQVPTSKLEPSLKKDSKRRSFPMAEVEKPRHPRSNKQLPT 391

  Fly   164 YSNTDDLSSPIHRTEGQFHVTTGEEEDCGNRSSRQPKQRLGKLA----------ALADTINQ--- 215
            ..:..|:...:....|..:          :|:.||..:|.|...          .:.|.:|.   
  Fly   392 CPSLSDIERVVESKRGSNY----------DRNIRQESRRKGAPTKEVILGWTEPKITDMLNYEGK 446

  Fly   216 ----------------WE-----------------------DDTSHHEVHRLLEAP---PPKPHL 238
                            |:                       ::.:.:.||:  |.|   |.:.:.
  Fly   447 TASEFRTPAEPQVAIGWQMPKAQPQPVVPKVSLDTVDGSVSENLASNMVHK--ETPIKYPSRVNT 509

  Fly   239 SSRRAE---------------KGPAP---------------------LPPKKDEVDEASRTKQLK 267
            :..:|.               ||..|                     :.|||...:..::..|.:
  Fly   510 AGGQASQKFIWSEQWRNLSPWKGNKPKNLGKKSKNFLNNSKKKILRFVSPKKSNQEVHTQLDQHR 574

  Fly   268 WDPK--------VLSSLEAQG----------FQRRESSTIKHTYDYAKQEEAAPASKVEDAVLTA 314
            :.|:        ..|.|:.|.          .|...|.|...|......|:  |....|..|   
  Fly   575 FTPQQCTIGVQTSTSQLDLQSQSPPGSYHSPMQTTPSGTTTSTRQQLDTEQ--PYFDFERKV--- 634

  Fly   315 KPPVPQKSTTVSQVAK--NFASSAPAP-------KPAPAPAVSVKSG--LVSGRAAL-------- 360
            |.|.|.|....:..|:  :|.::|.:|       |.........|.|  |.|.||.|        
  Fly   635 KAPTPPKKLPRANRARKLDFQAAATSPTTYRSYHKDLDQDVTITKMGYLLSSIRAKLEASDEHAV 699

  Fly   361 --FENKG-------------------TGGQSQG-------LRNQKDPCELSLKERMKLFETGNNK 397
              |::..                   |.|.|.|       .|.|:|                   
  Fly   700 RTFQDCSRFDRHEPQISHLQTESYDCTDGPSSGATTSLATTRQQRD------------------- 745

  Fly   398 AMLPMAPIGSAPSITQIRAEEVKQHLAAMHPVTAAA------------ATTVVAATKPKQENKLR 450
                   ..|.|..::|..:.::...:..|.|..||            :|..|:.:.|..... |
  Fly   746 -------FDSEPIYSEIEEDCLRIRGSPHHEVRTAAQIIDHTPTPTESSTAYVSGSVPAPSTS-R 802

  Fly   451 DKVAALVANAQSSAET--RIKDIDRQRQEDMQIISNRFNKQKELFDNQPS-------DSSVAAQA 506
            |.::|:.|..|.:.:.  ::|.:|:.     ||.......||......|.       |.:|..::
  Fly   803 DDISAMYARVQKTPKNSPQMKPVDKP-----QISFQAIQPQKSTHSFSPPITTHIVLDQAVQPKS 862

  Fly   507 ---RPPAPAPSRVVRPMPPPPPPPIAALSPGLASSKRRSPGDAPTTDEDSKRARKSHSDRLYPAL 568
               ..||...:::|.|....|..|: ||...|..|                 .:..:..:..|..
  Fly   863 CTQSNPAQLSTQMVSPQSTAPQQPV-ALGHFLHES-----------------LKNGNFFQFMPLP 909

  Fly   569 SDLDSSGDNCCAAETASATDDS-HQQDEEETESCMDESDDQSQTEDSSAGMCNGSLGREIMSAVQ 632
            .:...:..:|.|::|   |:.| .:|.:.:..|........:.:|..|....|.:|.|..:| :|
  Fly   910 EEPSGTESSCSASQT---TESSVIRQPKLKLPSPHAHQSLNNISEQHSPPKQNRNLSRSELS-LQ 970

  Fly   633 RNEV----------------EMQQQQTGKKTVRYADQDMYYDDSSLNSSQVSAGIDDYLDEALVE 681
            |:|:                ::....:...:|.|...:..|.|.||..:. |||     ...:..
  Fly   971 RSEIFLDNLCRSELVLDRPEKVPNNTSNMDSVSYDMPEQLYADYSLVGAG-SAG-----SSFVTN 1029

  Fly   682 DYGSTQDD------------QSDSGDEQNASRLSLGSKGTTASNSFSFRKNPASIC--TPIEEHH 732
            ||||.|.:            ||.....:.||.|::......|::...|..|.:..|  ||.:...
  Fly  1030 DYGSGQIEPEPANQSTPKKKQSQRFTTKPASNLTIEINDGQATSLRHFGNNLSISCPTTPQQAQA 1094

  Fly   733 EMEMDLQTPLLSGAQPVKSELSVNQDNDNLVTLVHTVSFYRRQQSANSSNSTPVRKICREQQVMR 797
            ...:|          |     :|..::.:|..|:.|:        .|.|:|         |.:..
  Fly  1095 SQAVD----------P-----TVLHNSSSLGELMQTM--------PNPSDS---------QLMSV 1127

  Fly   798 SALAGDCHAKHRLEYDSPQQSDY-------VAAATDIA-DQTDEDDEEMQNAREVNDASQAQDKI 854
            ||||.....|:.|.....:..|:       :|.:.::: ||:::.|.|:.::     ...|...:
  Fly  1128 SALARYRLLKNALRRSYRKGKDFFLAEKQRLAQSLNLSRDQSNQTDGELDSS-----TYYANFNV 1187

  Fly   855 KKLLSEVCKQQQVIGQASQALNLCAATVEFSGSTESVEGERYLLLATHRRQACLDEVQRLRVENS 919
            ..||::.....:   |.:||:::|........|.|.||.||.||.:|.|:..  ..|.:|..|  
  Fly  1188 DSLLNDSLNPNE---QLAQAVSICRQMPTLEISAEMVEAERLLLFSTLRKST--PPVCQLNDE-- 1245

  Fly   920 IRPVGAPKEKGLLTVKDITIPLRQEYVRKMASNNINGHHLVCLLKYNEHVLATKTVPTMPGLLSV 984
              .:.|.::...|.:..:.:|:|.:..|.|..|    :|.:|..:....:.:|::|....|  |.
  Fly  1246 --ALAARRKSQCLLIDAMELPVRADVSRDMFFN----YHYICTFECGGRIRSTQSVECQNG--SA 1302

  Fly   985 KFPDVLQLNNVYADFRITLEIYGMLAQRDQLPHELKYHINLNKKGGIKT----PKK--------- 1036
            .|.|            ..||.|.. ...|.|  ||:..|.:.:...:.|    |.|         
  Fly  1303 FFRD------------CGLEFYSG-ENADSL--ELRCQIFMLRLRKVSTLALEPAKSLRRGSGNL 1352

  Fly  1037 ----------KGGENRLVMPPVQSPAGPH---VVRTP-QLVQY------GFAIFSLR--EIQRTT 1079
                      .|||.  :|...:..|..|   |..:| |||..      ...:.|.|  ::..||
  Fly  1353 GSANSSCSAGSGGEQ--IMSRFRLHASFHLRAVDLSPFQLVSNESRSSDKICLRSSRSWQVPLTT 1415

  Fly  1080 WTLTQVLGVS-PLEGVVHMKVNCELSVSVEYKGFLTMFEDISGFGAWHRRWCYLNGSVINYWKYP 1143
            .|.:..||.: .:.|.|.:::     ....:.|:|.: :|......|:||||.|:|..::.|::.
  Fly  1416 HTKSTNLGPAISITGRVDLRL-----PKTRFSGYLNV-QDPKSQHNWNRRWCSLDGVRLSVWQHE 1474

  Fly  1144 DDEKRKTPMGSIDLNSCTSQKVTTAPRDICARLNTMLLECERPALETDQESLIIVPNGRTTTVRH 1208
            |:.:...|:.:::|.......:..|||::|||..:.||:    ...:|.||      ||.     
  Fly  1475 DNLESDIPIFTLELPGLGQSLIAAAPRELCARARSFLLQ----GRNSDCES------GRV----- 1524

  Fly  1209 LLSADTKEEREEWCAYLNKALTLLRAW 1235
            ..:|||:.|..||..:||:|:...|.|
  Fly  1525 FFAADTQAELSEWLIHLNEAIAFARHW 1551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scraNP_724582.1 Anillin_N 153..227 CDD:292637 12/125 (10%)
Anillin 929..1076 CDD:285397 38/181 (21%)
PH_anillin 1106..1233 CDD:269964 36/126 (29%)
PH 1107..1229 CDD:278594 35/121 (29%)
CG30183NP_001137745.2 PH_anillin 1438..1549 CDD:269964 36/126 (29%)
PH 1442..1546 CDD:278594 36/119 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449709
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3640
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D110462at33208
OrthoFinder 1 1.000 - - FOG0003560
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21538
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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