DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scra and Anln

DIOPT Version :9

Sequence 1:NP_724582.1 Gene:scra / 35696 FlyBaseID:FBgn0261385 Length:1239 Species:Drosophila melanogaster
Sequence 2:XP_038938195.1 Gene:Anln / 363031 RGDID:1561367 Length:1134 Species:Rattus norvegicus


Alignment Length:1331 Identity:344/1331 - (25%)
Similarity:535/1331 - (40%) Gaps:305/1331 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDPFTQHMLEKAEQRSRALGISNASKFPLVECSVPSSSATSASGGDAGVLAPRSRSPGGQSAASG 65
            |||||:.:||:...|...|....|.:        |:::|.||.....| ..|.|.:...|.....
  Rat     1 MDPFTEKLLERTRARRENLQRKMAER--------PTAAARSAPHAKRG-REPLSEASNQQQPLLA 56

  Fly    66 GGKVVTLGKATLEASPAK-------PLRHYTAVNKENLDMGIEINITTDKPIGVQVEIQEQEVTD 123
            ||:    .|:..:.||:|       .:......|||.:|..   ...:.||...|::........
  Rat    57 GGE----EKSCTKPSPSKKRCSDKIEVEASDLENKEPVDAA---KPCSPKPAPRQMKPPAPAAIS 114

  Fly   124 DEEQAEGGALNPLLEAEPVNQPLARLRDTS--RSRLQRMGALYSN-----TDDLSSPIHRTEGQF 181
            |...|....|:           ..:...||  ::|:|::.....:     |||:|...|     |
  Rat   115 DSVAAPASLLS-----------TGKASTTSSVKTRMQKLAEQRRHWDSEITDDVSESSH-----F 163

  Fly   182 HVTTGEEEDCG------NRSSRQPKQRLGKLAALADTINQWEDDTSHHEV-HRLLEAPPPKPHLS 239
            .....||:...      :.:|..|..|.|:||.||.||..||||.|:... ...::..|....||
  Rat   164 SPMPSEEKPASPSKPPVSNASATPVGRRGRLANLAATICSWEDDVSYSSAKQNSVQEQPGTACLS 228

  Fly   240 SRRAEKGPAPLPPKKDEVDEASRTKQ------LKWDPKVLSSLEAQG--FQRRESSTIKHTYDYA 296
            ...:..||:..........||:...|      :|.||   :|..|.|  .:...||.:|.:   :
  Rat   229 KSSSASGPSASINSSSVQQEATCCSQRDGNASVKKDP---TSNAADGPLLKASVSSPVKAS---S 287

  Fly   297 KQEEAAP----ASKVEDAVLTAKPPVPQKSTTVSQVAKNFASSAPAPKPAPAPAVSVKSGLVSGR 357
            ....:||    ..:|:...|..|...|.|    ::|.|      |..||..:.|:..|.|     
  Rat   288 SPVRSAPFITRNCEVQSPELLHKTVSPLK----TEVLK------PCEKPTLSQALQPKEG----- 337

  Fly   358 AALFENKGTGGQSQGLRNQKDPCELSLKERMKLFETGNNKAMLPMAPIGSAPSITQIRAEEVKQH 422
                .||....|||    .||          ||...|..         |..|.:.:. .|..::|
  Rat   338 ----ANKEVCLQSQ----SKD----------KLATPGGR---------GIKPFLERF-GERCQEH 374

  Fly   423 LAAMHPVTAAAATT--VVAATKPKQENKLRDKVAALVANAQSSAETRIKDIDRQRQEDMQIISNR 485
             :...|...|...|  :...||..||...:.       |..||.....:.:.::|::::..:..|
  Rat   375 -SKESPTCRAFHRTPNITPNTKAIQERLFKQ-------NTCSSTTHLAQQLKQEREKELACLRGR 431

  Fly   486 FNKQKELFDNQPSDSSVAAQARPPAPAPSRVVRPMPPPPPPPIAALSPGLASSKRRSPGDAPTTD 550
            |:| ..|:..:..:.|.:.|..     ..:.|.....|             ..|.:.....|:| 
  Rat   432 FDK-GSLWSAEKDEKSRSKQLE-----TKQEVHCQNSP-------------LKKHQIVSGTPST- 476

  Fly   551 EDSKRARKSHSDRLYPALSDLDSSGDNCCAAETASATDDSHQQDEEETESCMDESDDQSQT---- 611
                    |.||::                |||.:|...|..:....|||.|.:|.....|    
  Rat   477 --------SVSDKV----------------AETPTAVKISGTEPAGSTESEMTKSSPLKITLFLE 517

  Fly   612 EDSSAGMCNGSLGREIMSAVQRNEVEMQQQQTGKKTVRYADQDMYYDDSSLNSSQVSAGIDDYLD 676
            |:.|            :......|||       :||....:.:|..||..:|||:|   |:|...
  Rat   518 EEKS------------LKVASDPEVE-------QKTEAVHEVEMSVDDEDINSSKV---INDIFS 560

  Fly   677 EALVE---DYGSTQDDQ----SDSGDEQ----NASRLSLGSKGTTASNSFSFRKNPASICTPIEE 730
            :.|.|   |...:|::.    ::|.:||    |.|.:||.:.........:.:.   .|.:|   
  Rat   561 DVLEEGELDVEKSQEEMDQVGTESSEEQEDVLNISSMSLLAPLAQTVGVVNLQN---VISSP--- 619

  Fly   731 HHEMEMDLQTPLLSGAQP-----VKSELSVNQDNDNLVT----LVHTVSFYRRQQSANSSNSTPV 786
                |::|:...||...|     .::.:...:..|:|.:    |::::..||.|:..        
  Rat   620 ----ELELRDSSLSAPSPKPGKFQRTRVPRAESGDSLSSEDRDLLYSIDAYRSQRFK-------- 672

  Fly   787 RKICREQQVMRSALAGDCHAKHRLEYDSPQQSDYVAAATDIADQTDEDDEEMQNAREVNDASQAQ 851
                                    |.:.|.....:....|:..:..|.:.....  :||    .:
  Rat   673 ------------------------ETERPSIKQVIVRKEDVTSKLSEKNGVFSG--QVN----IK 707

  Fly   852 DKIKKLLSEVCKQQQVIGQASQALNLCAATVEFSGSTESVEGERYLLLATHRRQACLDEVQRLRV 916
            .|:::|.:::..||.||.|||||||.|.......||.|..|.||.||:||.:|...:||:.:|:.
  Rat   708 QKMQELNNDINLQQTVIYQASQALNCCVDEEHGKGSLEEAEAERLLLIATEKRALLIDELNKLKS 772

  Fly   917 ENSIR--------PVGAPKEKGLLTVKDITIPLRQEYVRKMAS--NNINGHHLVCLLKYNEHVLA 971
            |...|        ..|....||.:|:.:|.:||:.|:|...|.  .:.|.::|:.|....|.::|
  Rat   773 EGPQRRNKTAVASQSGFAPSKGSVTLSEICLPLKAEFVCSTAQKPESSNYYYLIMLKAGAEQMVA 837

  Fly   972 TKTVPTMPGLL--SVKFPDVLQLNNVYADFRITLEIYGMLAQRDQLPHELKYHINLNKKGGIKTP 1034
            |....|...|.  ::.||....||:|..||.|.:|:|.::.::|....|.|...:.:|   ..||
  Rat   838 TPLASTANSLSGDALTFPTTFTLNDVSNDFEINVEVYSLVQKKDSSGPEKKKKASKSK---AITP 899

  Fly  1035 KK-------KGGENRLVMPPVQSPAGPHVVRTPQLVQYGFAIFSLREIQRTTWTLTQV------- 1085
            |:       |...:..||   .||.|...|||......|....||..:..|.:.|.::       
  Rat   900 KRLLTSITSKSSLHASVM---ASPGGLSAVRTSNFTLVGSHTLSLSSVGDTKFALDKINFDVREQ 961

  Fly  1086 --LG---------VSPLEGVVHMKVNCELSVSVEYKGFLTMFEDISGFGAWHRRWCYLNGSVINY 1139
              ||         :|||||.:.:|::|:::.:||.|||||:|||:|||||||||||.|:|:.|:|
  Rat   962 ELLGYLFQEKVPFLSPLEGHICLKISCQVTSTVEEKGFLTIFEDVSGFGAWHRRWCVLSGNCISY 1026

  Fly  1140 WKYPDDEKRKTPMGSIDLNSCTSQKVTTAPRDICARLNTMLLECERPALETDQESLIIVPNGRTT 1204
            |.|||||:||.|:|.|:|.:|.|.::..|.|:.|||.||:.|...||..|.|:|:|:........
  Rat  1027 WTYPDDERRKNPIGRINLANCISHQIEPANREFCARRNTLELITVRPQREDDRETLVSQCRDTLC 1091

  Fly  1205 TVRHLLSADTKEEREEWCAYLNKALTLLRAW 1235
            ..::.|||||||||:.|...||:.:..:|.|
  Rat  1092 VTKNWLSADTKEERDLWMQKLNQVIVDIRLW 1122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scraNP_724582.1 Anillin_N 153..227 CDD:292637 26/87 (30%)
Anillin 929..1076 CDD:285397 46/157 (29%)
PH_anillin 1106..1233 CDD:269964 65/126 (52%)
PH 1107..1229 CDD:278594 65/121 (54%)
AnlnXP_038938195.1 PHA03307 26..>200 CDD:223039 44/205 (21%)
Anillin_N 135..221 CDD:406426 25/90 (28%)
Anillin_N 418..483 CDD:406426 15/108 (14%)
Anillin 792..945 CDD:400479 46/158 (29%)
PH_anillin 993..1120 CDD:269964 65/126 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341446
Domainoid 1 1.000 139 1.000 Domainoid score I4670
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 299 1.000 Inparanoid score I2625
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003560
OrthoInspector 1 1.000 - - otm44389
orthoMCL 1 0.900 - - OOG6_106902
Panther 1 1.100 - - O PTHR21538
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4027
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.890

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