DRSC/TRiP Functional Genomics Resources

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Protein Alignment scra and Rtkn2

DIOPT Version :9

Sequence 1:NP_724582.1 Gene:scra / 35696 FlyBaseID:FBgn0261385 Length:1239 Species:Drosophila melanogaster
Sequence 2:NP_001346247.1 Gene:Rtkn2 / 170799 MGIID:2158417 Length:604 Species:Mus musculus


Alignment Length:432 Identity:97/432 - (22%)
Similarity:149/432 - (34%) Gaps:114/432 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   851 QDKIKKLLSEVCKQQQVIGQASQALNLCAA-----TVEFSGSTESVEGERYLLLATHRRQACLDE 910
            ::.|.||||...|:.||: .|.:.|.:|:|     |.|...|.|.:..:....|.       ||.
Mouse    28 REGIWKLLSLSTKKDQVL-HAVKNLMVCSARIQAYTAELQKSKEEIANQTGARLV-------LDS 84

  Fly   911 VQRLRVENSIRPVGAPKEKGLLTVKDITIPL---------RQEYVRKMASNNINGHHLVCLLKYN 966
            ....:...|.|        |.:.:.||.|||         .:|..::.|        :.||.:..
Mouse    85 SSENKEGESCR--------GKIALSDIRIPLMWKDSDHFSNKECTQRFA--------IFCLFRMG 133

  Fly   967 EHVLATKTVPTMPGLLSVKFPDVLQLNNVYADFRITLEIYGMLAQRDQL---PHEL--KYHINLN 1026
            ..|..|..|.....:..:.|.:|...|....||:|.:|:|...|:...|   |.:|  |...:::
Mouse   134 AQVFDTDMVIVDQTVTDICFENVTIFNEAGPDFQIKIEVYSCSAEESSLTNTPRKLAKKLKTSIS 198

  Fly  1027 KKGGIKTPKKKGGENRLVMPPVQSPAGPHVVRTPQLVQYGFAIFSLREIQRTTWTL--------T 1083
            |..|.|.......|:........|.||              |.:.|  :..||.||        |
Mouse   199 KATGRKISAALQEESPEACLLAGSVAG--------------AKYHL--LAHTTLTLENAGDCFKT 247

  Fly  1084 QVLGVS---------PLEGVVHMKVNCEL------SVSVEYKGFLTMFEDISGFGAWHRRWCYLN 1133
            ..|.|.         ||.|    .|.|.|      ..:..:.|||...:...|...|.|.:|.|.
Mouse   248 HNLSVHGDEECSFWLPLYG----NVCCRLVAQPACMAADAFAGFLNEQQTGKGLVGWRRLYCALR 308

  Fly  1134 GSVINYWKYPDDEKRKTPMGSIDLNSCTSQKVTTAPRDICARLNTMLLECERPALETDQE----- 1193
            |..:..:..|::.:.|.            :.....|.|...|:.         |:|.|.:     
Mouse   309 GGKLRCFYGPEEIEAKV------------EPALVVPIDKETRIQ---------AVEKDSKKMHCF 352

  Fly  1194 SLIIVPNGRTTTVRHLLSADTKEEREEWCAYLNKALTLLRAW 1235
            |::....||  .|.|:.:||:..:.:||.....:....|..|
Mouse   353 SVLSTAAGR--AVSHIFAADSLADFQEWMGAFRQHFFDLSQW 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scraNP_724582.1 Anillin_N 153..227 CDD:292637
Anillin 929..1076 CDD:285397 35/160 (22%)
PH_anillin 1106..1233 CDD:269964 26/131 (20%)
PH 1107..1229 CDD:278594 26/126 (21%)
Rtkn2NP_001346247.1 Hr1 12..67 CDD:128981 14/39 (36%)
Anillin 94..239 CDD:311895 39/176 (22%)
PH_rhotekin2 282..390 CDD:270069 26/130 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 481..590
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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