Sequence 1: | NP_001260781.1 | Gene: | Vps13 / 35693 | FlyBaseID: | FBgn0033194 | Length: | 3321 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001320409.1 | Gene: | AT1G48090 / 841226 | AraportID: | AT1G48090 | Length: | 4173 | Species: | Arabidopsis thaliana |
Alignment Length: | 4596 | Identity: | 855/4596 - (18%) |
---|---|---|---|
Similarity: | 1495/4596 - (32%) | Gaps: | 1783/4596 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 AVVADVLN---KVLGDYIENLDRNQLKIGIWGGDVVLQNLKIRENALDELDLPVQLIYGYLGKLV 66
Fly 67 LKIPWKNLYSQPVIVNIEDLYVLV--SPNNNVQYNAEKEAKYE---MDLKKAALDALEAARKKEL 126
Fly 127 EMDQPKADAGFAEKLTAQIVNNLQVQITNVHLRYEDTTTT-GSPFSFGISLHELELYTTDCDWEK 190
Fly 191 CYMAQQASQVFKIAN-LSCLSAYLNCGGQLYANNKSDLSQQFKTNI------------------- 235
Fly 236 ------------------ACKETKP---------NYNYVLGPISCNAKLKLNMNPELDDP--PFE 271
Fly 272 KPKIDLTLEMEKLNVGLTNTQFDNLMKLGDAMNRQQLGIPYRKYRPYNIPYKGHARDWWHFAITS 336
Fly 337 ILEEEVRKPRESW-TWGHIKTHRERCNTYAQKYKEQCLSKKPSAVLTETCRLLETELDVFNLLLI 400
Fly 401 R--QRVNIEIAKQREAVPE---QKSGWFSGWGWGGGAKKDDQTTS----QKLVEKFEAAMTSEEK 456
Fly 457 EKMYRAIGYQENAKPTDLPESYEAIRMNFKLIALEVGLY--KDERNSSAATKDFHELPSLVLLNF 519
Fly 520 SMATALITQRPAAEAISIIAG-MREIKVTGLTRNDYTPL---------------LVESKITD-EF 567
Fly 568 NLLEVFFETNPLDKLCDQRVKVVARPLQIT-----YD------------APTILALINAFQTPGD 615
Fly 616 VTLSKFEDAASTKISNFKERSATGMQYMIDKKA--VLDVDILLMPNILVVPHKGVYDAGNVSLLV 678
Fly 679 VSMGQVHLSSQPRRESNKLQHLFSAGEDKDEILKTVMENAYDRFTVAVDDVQMLVVRAGEPWQN- 742
Fly 743 ALAEANSTEMHVLRPVSLKVTAALCVVDN-------------DPRLPNIKVDIDLPAILVNVSED 794
Fly 795 R----------IFLAIKVATSIP---LPEQKEPAS--------------------------RLTQ 820
Fly 821 T-------NSRSSMSISNFI---NKEVKKIGPSASGSSASKDPLLDEI-IQYTSLDVNFSLGEIN 874
Fly 875 FVLFQSSRKC-----------ETSPDVSIEFL--TPDGD----------------VLPSQLTE-- 908
Fly 909 ---------NIQEPIEELPPTPPQQILSIDIRRLEAHFVSKTYESVATV--KLGDINLRQYDCQD 962
Fly 963 SDMDVLDVIYTPKQENSSNYL-FTV-----------SCTIADK---------------SSPEF-- 998
Fly 999 --------------STKYNSTEQLVVANFEVLQIVLHQE--------CLQRIMEV----VNNFQR 1037
Fly 1038 NLDLVLSS---------TRPRDRMGS-------------IGGGDGIKRTLNVILEDTE-EIMTTD 1079
Fly 1080 QMKRRKKTRRTHVVETVKVRVIANLDQVGLVLTGRKRPI--AEMNVKKFVSSLIIKSSYTEVNIG 1142
Fly 1143 LKDIQVLDLNPYTIHKNILSIVGK-----------DAFNC------------QIVIYNKEET--- 1181
Fly 1182 --QDYNSDDMKITVDIGCMKIIFLNWFVAGVMNFLNNFTAAQA-----TISQAGAAAAESARQKA 1239
Fly 1240 MDAYETATRMKLNIRIKAPIIIVPIGSQDRNALLLDLGLLELTNNTVEVAVAEEERLAV-IDEIK 1303
Fly 1304 LQICDVKISKIVLLDGNESTVDEVDAEVGFLSKFNMMNPMSCTLSITRNLSYTWYRDVPELNLSG 1368
Fly 1369 RLKSIELTLFADDYALVMLVLNRNLNEGLEEFPPSEEAPQEAQVRPERRNSRAGR---------- 1423
Fly 1424 --------LSRTVQVSPI---------REKIHESIKFNFQFDGVVINLMEGEGAGLARFGIYFLS 1471
Fly 1472 VKGTKLDNGTLSTSVVLCNIQMDDMRSNSKSQIRQYL-SRKDWVQPKLDTDEIIDACYNERNF-M 1534
Fly 1535 VDVTAIIKED----------------DTFAEVRVRGFDLIVCIDFLLKLTTFL------------ 1571
Fly 1572 TLPPEENP--RESVYIKPAPVSETARDTKH----------------------------SIRSSAI 1606
Fly 1607 LAAQELVPVESSSHEVPNRKMN---------------------LILHIDEPDIILVENL------ 1644
Fly 1645 --------EDLNTSC---------IIFNAQV---HLNY-----RSIND----KQIVNGQIDALKM 1680
Fly 1681 YMCAFLPER----REMTRH---------YILHPCVISLQGSTPEEEGMHISLKLSDIIINVSPAT 1732
Fly 1733 IELLNKAMLSVSSGTMTKCAIAEES-RNYSNLW-------------------------------- 1764
Fly 1765 -------------------------------------------HQHHFHSRTYWFTKVEQGVDA- 1785
Fly 1786 -----LEAEQ---------RS--VSTDNEKQKTEKCVIEIPSITLVIESGVGYYTKPLISLDTRI 1834
Fly 1835 TAVFNNWSR-----SLTAHGSLTLNMNYYNQALAE---WEPI----IELNEVIGRNGVR------ 1881
Fly 1882 ---EYTPWEL---------------KFE---------------------------MGMEKVQSEL 1901
Fly 1902 E----------DDAE-------------------------------------------QQAMHMN 1913
Fly 1914 ---------IHSAETLEITLSKTCLGLLSELAEAF---SQA---IDQNGLTKP---------DIV 1954
Fly 1955 APYVLENDTGFDVNLNLRKGIFT------LH--------------EVHRGGTPVGANSTLLMVAQ 1999
Fly 2000 SEEVDPSV--------------------------------------------IKTCTISTGGRAY 2020
Fly 2021 L-----------------------QTKDLSTLSEEDSEDYTLYVTIGDINKEIALP--------- 2053
Fly 2054 ----------------------------------------------------------------- 2053
Fly 2054 ------------------VSKSDTRFFNLMRSTSHEPWG--IISEVKQEYGTTKVNI-------- 2090
Fly 2091 ---------------HG------VVSV-------------------------HNH--FTTGLNIY 2107
Fly 2108 RRNPAPT------AQCFED----IFVGRVRPGEVFH-----VPLHAIYAESKDLFF-----SMRG 2152
Fly 2153 YRR--SVQGISWASNPSDLNY-------------------------------------------- 2171
Fly 2172 ------SHQLH------------------------------------------------------ 2176
Fly 2177 CDPTNTFEPLIMNARRSKSEVYFE-NTNKYTLLSAFYTIHLRPPLYLRNSLPINIQVSV-----A 2235
Fly 2236 GCSVRKEDGLDAQSSQRFVDRGYRKEDFLDYGEKPVNSGDVLHLPTVRLASKGKESKSFLVVRLV 2300
Fly 2301 QYLEKDWSCATEIWDYTDDVITWTFSSYDSEMKVDMDLYVKTENRHGSL-----MLTLFSPFWMI 2360
Fly 2361 NKTGMMLTYKSETTSVEVLYHPPE--YSGPILFTFRDKLFFDKK-----------KASIRI---- 2408
Fly 2409 -DNGQWSEKI-PLDVAG-----------------SVGEVICFANNQKYPVGVH------------ 2442
Fly 2443 ---------------NHLTQNSLTKQITFIPFYIVCNKCHFDIELQEQSRPADPWLHLEPNEMEP 2492
Fly 2493 L--WPRNDTKNNLVVRVDGK--ITPAFDFTEVICTLLKLEDSKYGG-----INVDVQT-TEGGVY 2547
Fly 2548 ITFTDYKPADAPG----------LLINHTGKQIVYHEKGTKNEHILNAKSTIMYAWDDPTGPK-- 2600
Fly 2601 --MLVFG---TNKEETDLKRDGIGE----------------VIMQDGGKVL----WVSFLDGLQR 2640
Fly 2641 VLLFTENESIANRTESTASLQSITQSIDLRIHGI------GLSVINNETGLDILYLGVTS----- 2694
Fly 2695 -----SGIIWESKKVTKNRFKELTINENALLEIEYQKYLVHKSVNDVQTYKLDNKFPI------- 2747
Fly 2748 ---------DFDLMILK--KTVERN--LRRSFYPAI-WLSRKSSPFQSQLHVKI-----NRIQVD 2793
Fly 2794 NQFLDPIFPVVLAPIPPPKSVASTTSLKPFIECSMVQRIMPNSTVRQFKYARILIQEFLFKVDLN 2858
Fly 2859 FLTAIAEMFAKEVSDEAAAKQFRQDVESIELPLSAFFEEHSLEEQKSFYDNLHLGPLKIHVSFSM 2923
Fly 2924 AGSD-TKALPGFLGSLVQGVGVTLTDVNDVVFRLAFFEREYQFFSQKQ--LINEITSHYTGQALK 2985
Fly 2986 QLYVLVLGLDVLGNPYGLVVGLKKGVEDLFYEPFQGAIQGPGEFAEGLVLGVKSLFGHTVGGAAG 3050
Fly 3051 AVSKITGAMGKGLAALTFDEDY-QKKRRQGIQNK-PKNFHEGLARSSKGLVMGFVDGVTGVVTKP 3113
Fly 3114 VTGARDNGVEGFFKGLGKGAIGLVARPTAGVVDFASGSFEA-------VKRAADASEDVKRMRPP 3171
Fly 3172 RFQHYDFVLRPYCLMEATGNKIMKETD-------------KGKFATTDNFIHCEEIIQKSEYLVV 3223
Fly 3224 TNYRVMYVQR-NEMFG---------VWTSLWSYLWNEISSVAATARGVQFTVKTDGKKVLGLFSS 3278
Fly 3279 KESPRKLVLVA-----DERKRDALVDIIESQRSDPNPLRATIAYPA 3319 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13 | NP_001260781.1 | Chorein_N | 4..113 | CDD:315323 | 42/115 (37%) |
VPS13 | 140..370 | CDD:318996 | 72/280 (26%) | ||
VPS13_mid_rpt | 574..807 | CDD:318998 | 49/275 (18%) | ||
SHR-BD | 2349..2600 | CDD:310922 | 61/338 (18%) | ||
VPS13 | <2701..3232 | CDD:330393 | 130/581 (22%) | ||
VPS13_C | 2904..3074 | CDD:318997 | 34/173 (20%) | ||
AT1G48090 | NP_001320409.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 77 | 1.000 | Domainoid score | I3095 |
eggNOG | 1 | 0.900 | - | - | E1_COG5043 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 388 | 1.000 | Inparanoid score | I507 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001282 | |
OrthoInspector | 1 | 1.000 | - | - | otm3451 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR16166 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X990 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
11 | 10.920 |