DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps13 and AT1G47400

DIOPT Version :10

Sequence 1:NP_610299.2 Gene:Vps13 / 35693 FlyBaseID:FBgn0033194 Length:3321 Species:Drosophila melanogaster
Sequence 2:NP_175173.2 Gene:AT1G47400 / 841144 AraportID:AT1G47400 Length:50 Species:Arabidopsis thaliana


Alignment Length:46 Identity:11/46 - (23%)
Similarity:19/46 - (41%) Gaps:14/46 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  3185 LMEATGNKIMKETDKGKFATTDNFIHCEEIIQKSEYLVVTNYRVMY 3230
            :|....|..:|..|   .|:|   ::.|:::..|        ||.|
plant     1 MMSFVANLAIKRFD---HAST---VYVEDVVDSS--------RVAY 32

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps13NP_610299.2 MRS6 4..>1969 CDD:227376
VPS13 137..370 CDD:465309
SHR-BD 2351..2599 CDD:461974
MRS6 <2701..3232 CDD:227376 11/46 (24%)
VPS13_C 2904..3074 CDD:465310
AT1G47400NP_175173.2 None
Blue background indicates that the domain is not in the aligned region.

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