Sequence 1: | NP_001260781.1 | Gene: | Vps13 / 35693 | FlyBaseID: | FBgn0033194 | Length: | 3321 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001326732.1 | Gene: | AT3G50380 / 824202 | AraportID: | AT3G50380 | Length: | 3132 | Species: | Arabidopsis thaliana |
Alignment Length: | 3640 | Identity: | 645/3640 - (17%) |
---|---|---|---|
Similarity: | 1183/3640 - (32%) | Gaps: | 1141/3640 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 QLKIGIWGGDVVLQNLKIRENALDEL--DLPVQLIYGYLGKLVLKIPWKNLYSQPVI-VNIEDLY 87
Fly 88 VLVSPNNNVQYNAEKEAKYEMDLKKAALDALEAARKKELEMDQPKADA--GFAEKL----TAQIV 146
Fly 147 NNLQVQITNVHLRYEDTTTTGSPFSFGISLHELELYTTDCDWEKCYMAQQASQVFKIANLSCLSA 211
Fly 212 YLNCGGQLYANNKSDLSQQFKTNIACKETKPNYNYVLGPISCNAKLKLNMNPELDDPPFEKPKID 276
Fly 277 LTLEMEKLNVGLTNTQ-------FDNLMKLGDAMNRQQLGIPYR------KYRPYNIP-YKGHAR 327
Fly 328 DWWHFAITSILEEEVRKPRESWTWGHIKTHRERCNTYAQKYKEQCLSKKPSAVLTETCRLLETEL 392
Fly 393 DVFNLLLIRQRVN-----IEIAKQREAVPEQKSGW-FSGWGWGGGAKKDDQTTSQK--LVEKFEA 449
Fly 450 AMTSEEKEKMYRAIGYQENAKPTDLPESYEAIRMNFKLIALEVGLYKDERNSSAAT--------- 505
Fly 506 --KDFHELPSLVLLNFSMATALITQR---PAAEAISI----IAGMREIKVT---------GLTRN 552
Fly 553 DYTPLLVESKI------TDEFNLL-EVFFETNPLDKLCDQRVKVVARPLQITYDAPTILALINAF 610
Fly 611 QTPGDVTLSKF----EDAASTKISNFKERSATGMQYMIDKKAVLDVDILLMPNILVVPHKGVYDA 671
Fly 672 GNVSLLVVS------MGQVHLSSQPRR-----ESN--KLQHLFSAGEDKDEIL---KTVMENAYD 720
Fly 721 RFTVAVDDVQM-----------------------LVVRAGEPWQNALAEANSTEMHVLRPVSLKV 762
Fly 763 TAALCVVDNDPRLPN------IKVDIDLPAILVNVSEDRIFLAIKVATSIPLPEQKEPASRLTQT 821
Fly 822 NSRSSMSISNFINKEVKKIGPSASGSSASKDPLLDEIIQYTSLDVNFSLGEINFVLFQSSRKCET 886
Fly 887 SPDVSIEFLTPDGDVLPSQLTENIQEPIEELPPTPPQQILSIDIRRLEAH--FVSKTYESVATVK 949
Fly 950 LGDINLRQYDCQDSDMDVLDVIYTPKQENSSNYLFTVSCTIADKSSPEFSTKYNSTEQLVVANFE 1014
Fly 1015 VLQIVLHQECLQRIMEVVNNFQRNLDLVLSSTRPRDRMGSIGGGDGIKRTLNVILEDTEEIMTTD 1079
Fly 1080 QMKRRKKTRRTHVVETVKVRVIANLDQVGLV-----LTGRKRPIAEMNVKKFVSSLIIKSSYTEV 1139
Fly 1140 NIGLKDIQVLDLNPYTIHKNILSIVGKDAFNCQIVIYNKEETQDYNSDDMKITVDIGCMKIIFLN 1204
Fly 1205 WFVAGVMNFLNNFTAAQATISQAGAAAAESARQKAMDAYETATRMKLNIRIKAPI-------IIV 1262
Fly 1263 PIGS---QDRNALLLDLGLLELTNNTVEVAVAEEERLAVIDEIKLQI----CDVKISKIVLLDGN 1320
Fly 1321 ESTVDEVDAEVGFLSKFN-MMNPMSCTLSITRNLS-----YTWYRDVPELNLSGRLK-------- 1371
Fly 1372 SIELTLFA------DDY-ALVMLVLNRNLNEGLEEFPPSEEAPQEAQVRPERRNSRAGRLSRTVQ 1429
Fly 1430 VS--PIREKIHESIKFNFQFDGVVINLMEGEGAGLARFGIYFLSVKGTKLDNGTLSTSVVLCNIQ 1492
Fly 1493 MDDMRSNSKS--------QIRQYLSRKDWVQPKLDTDEIIDACYNERNFMVD---VTAIIKEDDT 1546
Fly 1547 ----FAEV-----RVRGFDLIVCID----FLLKLTTFLTLPPEENPRESVYIKPAPVSETARDTK 1598
Fly 1599 HSIRSSAILAAQELVPVESSSHEVPNRKMNLILHIDEPDIILVENLEDLNTSCIIFNAQVHLNYR 1663
Fly 1664 SINDKQIVNGQIDALKMYMCAFLPERREMTRHY-----ILHPCVISLQGSTPEEEGMHISLKLSD 1723
Fly 1724 IIINVSPATIELLNKA--MLSVSSGTMTKCAIAEESRNYSN--LWHQHH---------------- 1768
Fly 1769 -----------------------FHS--RTYWFTKVEQGVDALEAEQRSVSTDNEKQKTEKCVIE 1808
Fly 1809 IPSITLVIESGVGY-------YTK---PLISLDTRIT----AVFNNWSRSLTAHGSLTLNMNYYN 1859
Fly 1860 QALAEWEPIIELNEVIGRNGVREYTPWELKFEMGMEKVQSELEDDAEQQAMHMNIHSAET----- 1919
Fly 1920 ---LEITLSKTCLGLLSELAEAFSQAIDQNGLTKPDIVAPY------------VLENDTGFD--- 1966
Fly 1967 ---------VNLNLRKGIFTLHEVH--RGGTPVGANSTLLMVAQSEEVDPSVIKTCTISTGGRAY 2020
Fly 2021 LQTKDLSTLSEEDSEDYTLYVTIGDINK--EIALPVSKSD-TRFFN---------LMRSTSHEPW 2073
Fly 2074 GIISEVKQEYGTTKV----NIHGVVSVHNHFT---------TGLNIYRRNPAPTAQCFEDIFVGR 2125
Fly 2126 VRPGEVFHVPLHAIYAESKDLFFSMRGY----RRSVQGISWASNPSDLNYSHQLHCDPTNTFEPL 2186
Fly 2187 IMNARRSKSEV-------YFENTNKYTLLSAFYTIHLRPPLYLRNSLPINIQV---------SVA 2235
Fly 2236 GCSVRKEDGLDAQSSQRFVDRGYRKEDFLDY---------GEKPVNSGDVLHLPTVRLASKGKES 2291
Fly 2292 KSFLVVRLVQYLEKDWSCATEIWDYTDDVITWTFSSYDSEMKVDMDLYVKTENRHGSLMLTLFSP 2356
Fly 2357 FWMINKTGMMLTY------KSETTSVEVLYH--PPEYSGPILFTFRDKLFFDKKKASIRIDNGQW 2413
Fly 2414 SEK--IPLDVAGSVGEVICFANNQ-------KYPVGVHNHLTQNSL--TKQITFIPFYIVCNKC- 2466
Fly 2467 -------HF-----------------DIELQEQSRPADPWLHLEPNEMEPLWPRNDTKNNLVVRV 2507
Fly 2508 DGKITPA-------FDFTEVICTLLKLE----DSKYGGIN-VDVQTTEGGVYITFTDYKPADAP- 2559
Fly 2560 -----GLLINHTGKQIVYHEKGTKNEHILNAKSTIMYAWDDPTGPKMLVFGTN----KEETDL-- 2613
Fly 2614 ------------KRDGIGEVIMQDGG----------------KVLWVSFLDGLQRVLLFTENESI 2650
Fly 2651 ANRTESTASLQSITQSIDLRIHGIGLSVINNETGLDILYLGVTSSGIIWESKKVTKNRFKELTIN 2715
Fly 2716 ENALLEIEYQKYLVHKSVNDVQTYKLDNKFPIDFDLMILKKTVERNLRRSFYPAIWLSRKSSPFQ 2780
Fly 2781 SQLHVKINRIQVDNQFLDPIFPVVLAPIPPPKSVASTTSLKPFIECSMVQRIMPNSTVRQFKYAR 2845
Fly 2846 ILIQEFLFKVDLNFLTAIAEMFAKEVSDEAAAKQFRQDVESIELPLSAFFEEHSLEEQKSFYDNL 2910
Fly 2911 HLGPLKIHV------SFSMAGSDTKALPGFLGSLVQGVGVTLTDVNDVVFRLAFFEREYQFFSQK 2969
Fly 2970 QLINEITSHYTGQALKQLYVLVLGLDVLGNPY------GLVVGLKKGVEDLFYEPFQGAIQGPGE 3028
Fly 3029 FAEGLVLGVKSLFGHTVG--GAAGAVSKITGAMGKGL---------AALT--FDEDYQKKRRQGI 3080
Fly 3081 QNKPKNFHEGLARSS-------KGLVMGFVDGVTGVVTKPVTGARDNGVEGFFKGLGKGAIGLVA 3138
Fly 3139 R-------------------PTAGVVDFASGSFEAVKRAADASE-------DVKRMRPPRFQHYD 3177
Fly 3178 3177 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13 | NP_001260781.1 | Chorein_N | 4..113 | CDD:315323 | 15/89 (17%) |
VPS13 | 140..370 | CDD:318996 | 49/247 (20%) | ||
VPS13_mid_rpt | 574..807 | CDD:318998 | 53/281 (19%) | ||
SHR-BD | 2349..2600 | CDD:310922 | 59/312 (19%) | ||
VPS13 | <2701..3232 | CDD:330393 | 89/535 (17%) | ||
VPS13_C | 2904..3074 | CDD:318997 | 39/194 (20%) | ||
AT3G50380 | NP_001326732.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5043 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |