Sequence 1: | NP_001260781.1 | Gene: | Vps13 / 35693 | FlyBaseID: | FBgn0033194 | Length: | 3321 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021327607.1 | Gene: | vps13c / 798746 | ZFINID: | ZDB-GENE-070426-4 | Length: | 3755 | Species: | Danio rerio |
Alignment Length: | 3914 | Identity: | 1047/3914 - (26%) |
---|---|---|---|
Similarity: | 1777/3914 - (45%) | Gaps: | 880/3914 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MVFEAVVADVLNKVLGDYIENLDRNQLKIGIWGGDVVLQNLKIRENALDELDLPVQLIYGYLGKL 65
Fly 66 VLKIPWKNLYSQPVIVNIEDLYVLVSPNNNVQYNAEKEAKYEMDLKKAALDALE----------- 119
Fly 120 ---------------------------------AARKKELEMDQP---KADAGFAEKLTAQIVNN 148
Fly 149 LQVQITNVHLRYE-DTTTTGSPFSFGISLHELELYTTDCDWEKCYMAQQASQVFKIANLSCLSAY 212
Fly 213 LNCGGQL-YANNKSDLSQQFKTNIACK-ETKPNYNYVLGPISCNAKLKLNMNPELDDPPFEKPKI 275
Fly 276 DLTLEMEKLNVGLTNTQFDNLMKLGDAMNRQQLGIPYRKYRPYNIPYKGHARDWWHFAITSILEE 340
Fly 341 EVRKPRESWTWGHIKTHRERCNTYAQKYKEQCLSKKPSAVLTETCRL----------LETELDVF 395
Fly 396 NLLLIRQRVNIEIAKQ------REAVPEQKS--GWFSGWGWGGGAKKDDQTTSQKLVEKFEAAMT 452
Fly 453 SEEKEKMYRAIGYQENAKPTDLPESYEAIRMNFKLIALEVGLYKDERNSSAATKDFHELPSLVLL 517
Fly 518 NFSMATALITQRPAAEAISIIAGMREIKVTGLTRNDYTPLLVESKITDEFNLLEVFFETNPLDKL 582
Fly 583 CDQRVKVVARPLQITYDAPTILALINAFQTPGDVTLSKFEDAASTKISNFKERSATGMQYMIDKK 647
Fly 648 AVLDVDILLMPNILVVPHKGVYDAGNVSLLVVSMGQVHLSSQPRRESNKLQHLFSAGEDKDEILK 712
Fly 713 TVMENAYDRFTVAVDDVQMLVVRAGEPWQNALAEANSTEMHVLRPVSLKVTAALCVVDNDPRLPN 777
Fly 778 IKVDIDLPAILVNVSEDRIFLAIKVATSIPLPEQ-KEPASRLTQTNSR-SSMSISNFINKEVKKI 840
Fly 841 GPS-------------ASGSSASKDPLLDEIIQYTSLDVNFSLGEINFVLFQSSRK--------- 883
Fly 884 ------------------------------CE------------TSPD------VSIEFLTPD-- 898
Fly 899 --------------------------------------GDVLPSQLT------------------ 907
Fly 908 ----------------------------------------------------------------- 907
Fly 908 ----------------------------------------------------------------- 907
Fly 908 ----------------ENIQEPIEELPPTPPQQI----------------LSIDIRRLEAHFV-- 938
Fly 939 --SKTYESVATVKLG-------------------------DINLRQ---------YDCQDSDMDV 967
Fly 968 LD--------------------------------------------------------------- 969
Fly 970 --------------------------------------------------VIYTPKQEN------ 978
Fly 979 --------------------SSNYLFTVS--------------CTI-----------------AD 992
Fly 993 KSSPEFSTKYNSTEQLVVANFEVLQIVLHQECLQRIMEVVNNFQRNLDLVLS-STRPRDRMGSIG 1056
Fly 1057 GGDGIKRTLNVILEDTEEIMTTDQMKRRKKTRRTHVVETVKVRVIANLDQVG---LVLTGRKRPI 1118
Fly 1119 AEMNVKKFVSSLIIKSSYTEVNIGLKDIQVLDLNPYTIHKNILSIVGKDAFNCQIVIYNKEET-- 1181
Fly 1182 --QDYNSDDMKITVDIGCMKIIFLNWFVAGVMNFLNNFTAAQATISQAGAAAAESARQKAMDAYE 1244
Fly 1245 TATRMKLNIRIKAPIIIVPIGSQDRNALLLDLGLLELTNNTVEVAVAEEERLAVIDEIKLQICDV 1309
Fly 1310 KISKIVL-LDGNESTVDEVDAEVGFLSKFNMMNPMSCTLSITRNLSYTWYRDVPELNLSGRLKSI 1373
Fly 1374 ELTLFADDYALVMLVLNRNLNEGLEEFPPSEEAPQEAQVRPERRNSRAGR-LSRTVQVSPIRE-K 1436
Fly 1437 IHESIKFNFQFDGVVINL---------MEGEGAGLARFGIYFLSVKGTKLDNGTLSTSVVLCNIQ 1492
Fly 1493 MDDMRSNSKSQIRQYLSRKDWVQPKLDTDEIIDACYNERNFMVDVTAIIKEDDTFAEVRVRGFDL 1557
Fly 1558 IVC--IDFLLKLTTFL-----TLPPEENPRESVYIKPAPVSETARDTKHSIRSSAILAAQELVPV 1615
Fly 1616 ESSSHEVPNRKMNLILHIDEPDIILVENLEDLNTSCIIFNAQVHLNYRSINDKQIVNGQIDALKM 1680
Fly 1681 YMCAFLPERREMTRHYILHPCVISLQGSTPEEEGMHISLKLSDIIINVSPA---TIELLNKAMLS 1742
Fly 1743 VSSGTMTKCAIAEESRNYSNLWHQHHFHSRTYWFTKVEQGVD-ALEAEQRSVSTDNEKQ-KTEKC 1805
Fly 1806 VIEIPSITLVIESGVGYYTKPLISLDTRITAVFNNWSRSLTAHGSLTLNMNYYNQALAEWEPIIE 1870
Fly 1871 LNEVIGRNGVREYTPWELKFEMGMEKVQSELEDDAEQQAM------HMNIHSAETLEITLSKTCL 1929
Fly 1930 GLLSELAEAFSQA----IDQNGLTKPDIVAPYVLENDTGFDV----NLNLR-KGIFTLHEVHRGG 1985
Fly 1986 TPVGANSTLLMVAQSEEVDPSVIKTCTISTGGRAYLQTKDLSTLSEEDSEDYTLYVTIGDINKEI 2050
Fly 2051 ALPVSKSDTRFFNLMRSTSHEPWGIISEVKQEYGTTKVNIHGVVSVHNHFTTGLNIYRRNPAPTA 2115
Fly 2116 QCFEDIFVGRVRPGEVFHVPLHAIYAESKDLFFSMRG-----YRRSVQGISWASNPSDLNYSHQL 2175
Fly 2176 H----CDPT-NTFEPLIMNARRSKSEVYFENTNKYTLLSAFYTIHLRPPLYLRNSLPINIQVSVA 2235
Fly 2236 GCSVRKEDGLDAQSSQRFVDRGYRKEDFLDYGEKPVNSGDVLHLPTVRLASKGKESKSFLVVRLV 2300
Fly 2301 QYLEKDWSCATEIWDYTDDVITWTFSSYDSEMKVDMDLYVKTENRHGSLMLTLFSPFWMINKTGM 2365
Fly 2366 MLTYKSETTSVEVLYHPPEYSGPILFTFRDKLFFDKKKASIRIDNGQWSEKIPLDVAGSVGEVIC 2430
Fly 2431 FANNQKYPVGVHNHLTQNSLTKQITFIPFYIVCNKCHFDI---ELQEQSRPADPWLHLEPNEMEP 2492
Fly 2493 LWPRNDTKNNLVVRVDG--KITPAFDFTEVIC-TLLKLEDSKYGGINVDVQTTEGGVYITFTDYK 2554
Fly 2555 PADAPGLLINHTGKQIV-YHEKGTKNEHILNAKSTIMYAWDDPTGPKMLVFG--TNKEETDLKRD 2616
Fly 2617 GIGEVIMQDGGKVLWVSFLDGLQRVLLFTENESIANRTESTASLQSITQSIDLRIHGIGLSVINN 2681
Fly 2682 ETGLDILYLGVTSSGIIWESKKVTKNRFKELTINENALLEIEYQKYLVHKSVNDVQTYKLDNKFP 2746
Fly 2747 IDFDL--MILKKTVERNLRRSFYPAIWLSRKSSPFQSQLHVKINRIQVDNQFLDPIFPVVLAPIP 2809
Fly 2810 PPKSVASTTSLKPFIECSMVQRIMPNSTVRQFKYARILIQEFLFKVDLNFLTAIAEMF---AKEV 2871
Fly 2872 SDEAAAKQFRQDVESIELPLSAFFEEHSLEEQK--SFYDNLHLGPLKIHVSFSMAGSDTKALPG- 2933
Fly 2934 -----FLGSLVQGVGVTLTDVNDVVFRLAFFEREYQFFSQKQLINEITSHYTGQALKQLYVLVLG 2993
Fly 2994 LDVLGNPYGLVVGLKKGVEDLFYEPFQGAIQGPGEFAEGLVLGVKSLFGHTVGGAAGAVSKITGA 3058
Fly 3059 MGKGLAALTFDEDYQKKRRQGIQNKPKNFHEGLARSSKGLVMGFVDGVTGVVTKPVTGARDNGVE 3123
Fly 3124 GFFKGLGKGAIGLVARPTAGVVDFASGSFEAVKRA----ADASEDVKRMRPPRFQHYDFVLRPYC 3184
Fly 3185 LMEATGNKIMKETDKGKFATTDNFIHCEEII---QKSEYLVVTNYRVMYVQRNEMFGVWTSLWSY 3246
Fly 3247 LWNEISSVAATARG 3260 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13 | NP_001260781.1 | Chorein_N | 4..113 | CDD:315323 | 60/108 (56%) |
VPS13 | 140..370 | CDD:318996 | 79/232 (34%) | ||
VPS13_mid_rpt | 574..807 | CDD:318998 | 77/232 (33%) | ||
SHR-BD | 2349..2600 | CDD:310922 | 90/257 (35%) | ||
VPS13 | <2701..3232 | CDD:330393 | 230/550 (42%) | ||
VPS13_C | 2904..3074 | CDD:318997 | 97/177 (55%) | ||
vps13c | XP_021327607.1 | Chorein_N | 4..113 | CDD:315323 | 60/108 (56%) |
VPS13 | 186..414 | CDD:318996 | 78/231 (34%) | ||
VPS13_mid_rpt | 614..838 | CDD:318998 | 77/232 (33%) | ||
VPS13 | <1245..>2613 | CDD:330393 | 316/1494 (21%) | ||
SHR-BD | 2766..3018 | CDD:310922 | 90/257 (35%) | ||
VPS13 | <3186..3635 | CDD:330393 | 204/455 (45%) | ||
VPS13_C | 3323..3498 | CDD:318997 | 97/174 (56%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170583935 | |
Domainoid | 1 | 1.000 | 208 | 1.000 | Domainoid score | I2809 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG54975 | |
OrthoDB | 1 | 1.010 | - | - | D4159at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001282 | |
OrthoInspector | 1 | 1.000 | - | - | otm25658 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101020 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR16166 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X990 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
11 | 10.860 |