| Sequence 1: | NP_610299.2 | Gene: | Vps13 / 35693 | FlyBaseID: | FBgn0033194 | Length: | 3321 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_796125.2 | Gene: | Vps13b / 666173 | MGIID: | 1916380 | Length: | 3993 | Species: | Mus musculus |
| Alignment Length: | 4364 | Identity: | 778/4364 - (17%) |
|---|---|---|---|
| Similarity: | 1374/4364 - (31%) | Gaps: | 1606/4364 - (36%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2 VFEAVVADVLNKVLGDYIENLDRNQLKIGIWGGDVVLQNLKIRENALD-ELDLPVQLIYGYLGKL 65
Fly 66 VLKIPWKNLYSQPVIVNIEDLYVLVSPNNNVQYNAEKEAKYEMDLKKA--ALDALEAARKKELEM 128
Fly 129 DQPKADAGFAEKLTAQIVNNLQVQITNVHLRY-EDTTTTGSPFSFGISLHELELYTTDCDWEKCY 192
Fly 193 MAQQASQVF--KIANLSCLSAYLNCGGQLYANNKSDLSQQFKTNIACKETKPNYNYVLGPISCNA 255
Fly 256 KLKL-----NMNPELDDPPFEKPKIDLTLEMEKLNVGLTNTQ---FDNLMKLGDAMNRQQLG--- 309
Fly 310 ----------------------IPYRKYRPYNIPYKGHARDWWHFAITSILEEEVRKPR--ESWT 350
Fly 351 WGHIKT--------------------HRERCNTYAQKYKEQCLS-----KKPSAVLTETCRLLET 390
Fly 391 ELDVFNLLLIRQRVNIEIAKQREAVPEQKSGWFSGWGWGGGAKKDDQTTSQKL------------ 443
Fly 444 --------------VEKFEAAMTSEEKEKMYRAIGYQENAKPTDL------------PESYEAIR 482
Fly 483 MNFKLIALE--------VG-----------LYKDERNSSAATKDFHELPS-----LVLLNFSMAT 523
Fly 524 ALITQ----RPAAEAISIIAGMREIKVTGLTRNDYTP---LLVESK-----ITD--EFNLLEVFF 574
Fly 575 ETNPLDKLCDQRVKVVARPLQITY---DAPTILALINAFQTPGDVTLSKFEDAASTKISNFKE-R 635
Fly 636 SATGMQYMIDKKAVLDVDILLMPNILVVPHKGVYDAGNVSLLVVSMGQVHLSSQPRRESNKLQHL 700
Fly 701 -----------FSAGED----------------------KDEILK-----------TVMENAYD- 720
Fly 721 -RFTVAVDDVQMLVVRA-GEPWQNALAEANSTEMHVLRPVSLKVTAALCVVDNDPRLPNIKVDID 783
Fly 784 ------LPAILVNVSEDRIFLAIKVATSIPLPEQKEPASRLTQTNSRS-SMSISNFINKEVKK-- 839
Fly 840 -IGP-------------------------SASGSSASKDPLLDEIIQYTSLDVNFSLGEINFVLF 878
Fly 879 Q----SSRKCETSPDVSIEFLT---------------PDGDVLPSQLTENIQEPI------EELP 918
Fly 919 PTPPQQ------------------------------ILSIDIRRLEAHFVSKTYESVATVKLGDI 953
Fly 954 --NLRQ-YDCQDS--------------------DMDVLD----VIYTPKQENSSNYLFTVS---- 987
Fly 988 -------------------C--TIADKSSPEFSTKYNSTEQLVV---ANFEVLQIVLHQECLQRI 1028
Fly 1029 ME-------VVNNFQRNLDLVLSSTRPRDRMGSIGG----------------------------G 1058
Fly 1059 DGI-------------------------------------KRTLNVILEDTE----EIMTTDQMK 1082
Fly 1083 RRKKTRRTHVVET-VKVRVIA-NLDQV--------------GLVLTGRKRPI------------- 1118
Fly 1119 ----------AEMNVKKFVSSLIIKSSYTEVNIGLKDIQVLDLNPYTIHKNILSIVGKDAFNC-- 1171
Fly 1172 -----QIVIYNK-----EETQDYNSDDMKI-TVDIGCMKIIFLNWFVAGVMNFLNNFTAAQATIS 1225
Fly 1226 QAGAAAAESARQKAMDAYETATRMKLNIRIKAPIIIVPIG----SQDRNALLLDLGLLELTNNTV 1286
Fly 1287 EVAVAEEERLAVIDEIKLQICDVKISKIVLLDGNES----TVDEVDAEVGFLSKFNM-------- 1339
Fly 1340 -----MNPMSCTLSI----------TRNLSYTWYRDVPELNLSGRLKSIELTLFADDYALV---- 1385
Fly 1386 ----MLVLNRNLNEGLEEFPPSEEAPQEAQVRPERRNSRAGRLSRT------VQVSPIREKIHES 1440
Fly 1441 IKFNFQFDGVVINLMEGEGAG---LAR---------------FGIYFLSVKGTKLDNGTLSTSVV 1487
Fly 1488 LCNIQMDDMRSNSKSQIRQYLSRKDWVQPKLDTD--EIIDACYNERNFMVDVTAIIKEDDTFA-- 1548
Fly 1549 -EVRVRGFDLIVCIDFLLKLTTFLTLPPEENPRESVYIKPAPVSETARDTKHSIRSSAILAAQEL 1612
Fly 1613 VPVESSSHEVPNRKMNLILH--IDEPDIILVENLEDLNTSCIIFNAQ---VHLNYR--------- 1663
Fly 1664 ----------------------------SINDKQIVNGQIDALKMYMCAFLPERREMT------- 1693
Fly 1694 RHYI-----LHPCVISLQGSTPEEEGMHISLKLSDIIINVSPATIELLNKAMLSVSSGTMTKCAI 1753
Fly 1754 AEESRNYSNLWHQHHFHSRTYWFTKVEQGVDALEAEQRSVSTDNEKQKTEKCVI----------- 1807
Fly 1808 -----EIPSITLVIESGVGYYTKPLISL-DTRITAVFNNWSRSLTAHGSLTLNMNYYNQALAEWE 1866
Fly 1867 PIIELNEVIGRNGVREYTPWELKFEMGMEKVQSELEDDAEQ---QAMHMNIHSAETLEITLSKTC 1928
Fly 1929 LGLLSELAEAFSQAIDQNGLTKPDIV--APYVLENDTGFDVNL---NLRKGIFT----------- 1977
Fly 1978 -LHEVHRGGTPVGANSTLLMVAQSEE---------VDPSVIKTCTISTGGRAYLQTKDLSTLSEE 2032
Fly 2033 DSEDYTLYVTIG-----DINK------EIALPVSK------SDTRFFNLM----RSTSHEPWGII 2076
Fly 2077 SEVKQEYGTT----KVNIHGVVSVHNHFTTGLNIYRRNPAPTA--------QCFEDIFVGRVRPG 2129
Fly 2130 EVFHVPLHAIYAESKDLFFSMRGYRRSVQGISWASNPSDLNYSHQLHCDPTNTFEPLIMNARRSK 2194
Fly 2195 SEVYFENTNKYTLLSAFYTIHLRPPLYLR--NSLPINIQV---SVAGCSVRKEDGLDAQSSQRFV 2254
Fly 2255 DRGYRKEDFLDYGEKPVNSGDVLHL--PTVRLASKGKESKSFLVVRLVQYLEKDWSCATEIWDYT 2317
Fly 2318 DDVITWTFSSYDSEMKVDMDLYVKTENRHGSLMLTLFSPFWMINKTGMMLTYKSETTSVEVL--- 2379
Fly 2380 YHPPEYSGPILFTFRDKLFFDKKKASIRI-----DNGQWSEKIPLDVAGSVGEVICFANNQKYPV 2439
Fly 2440 GVHNHLTQ----NSLTKQITFIPFYIVCN-----------------------KCHFDIELQEQSR 2477
Fly 2478 PADPWLHLEPNEMEPL---------WPRN------DTKNNLVVRVDGKITPAFDFTEVICTLLKL 2527
Fly 2528 EDSKY-----------------------------------------GGINVDVQTTEGGV--YIT 2549
Fly 2550 F---TDYKPADAPGLLINHTGKQIV--YHEKGTKNEHI-------LNAKSTIMYA---------- 2592
Fly 2593 --WDDPTGPKMLVFG----------------TNKEETDL-KRDGIGEVIMQDGGKVLW-VSFLDG 2637
Fly 2638 LQRVLLFTENESIANRTESTASLQSITQS------------------IDLRI------------- 2671
Fly 2672 --------HGIGL-------SVINNETGLDILYL------------------------------- 2690
Fly 2691 -GVTSSGI-IWE-SKKVTKNRFKELTINENALLEIEYQKYLVHKSVNDVQTYKL----DNKFPID 2748
Fly 2749 -------------FDLMILKKTVERNLRRSFYPAIWLSRKSSP---FQSQLHVKINRIQVDNQFL 2797
Fly 2798 DPIFPVVLAPIPPPKSV-------------ASTTSLKP--FIECSMVQRIMP--------NSTVR 2839
Fly 2840 Q------FKY-----------------------------ARILIQEFLFKVDLNFLTAIAEMFAK 2869
Fly 2870 EVSDEAAAKQFRQDVESI-------------ELPLSAFFEEHSLEE-------QKSFYD--NLH- 2911
Fly 2912 -----------------------------------------------------------LGPLKI 2917
Fly 2918 HVS-----FSMAGSDTKALPG---------FLGSLVQGVGVT---LTDVNDVVFR---------- 2955
Fly 2956 -----------------LAF--FEREYQFFSQKQLINEITSHYTGQALKQLYVLVLGLDVLGNPY 3001
Fly 3002 GLVVGLKKGVEDLFYEPFQGAIQGPGEFAEGLVLGVKSLFGHTVGGAAGAVSKITGAMGKGLAAL 3066
Fly 3067 TFDEDYQKKRRQGIQNKPKNFHEGLARSSKGLVMGFVDGVTGVVTKPV---------TGARDNGV 3122
Fly 3123 EGFFKGLGKGAIGLVARPTAGVVDFASGSFEAVKRAADASEDVK-RMRPPRF-------QHYDFV 3179
Fly 3180 L-------RP-------YCLMEATGNK----------------IMKETDKGKFATTDNFIHCEEI 3214
Fly 3215 IQKSEYLVV 3223 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Vps13 | NP_610299.2 | MRS6 | 4..>1969 | CDD:227376 | 459/2574 (18%) |
| VPS13 | 137..370 | CDD:465309 | 52/290 (18%) | ||
| SHR-BD | 2351..2599 | CDD:461974 | 69/364 (19%) | ||
| MRS6 | <2701..3232 | CDD:227376 | 141/776 (18%) | ||
| VPS13_C | 2904..3074 | CDD:465310 | 56/277 (20%) | ||
| Vps13b | NP_796125.2 | Chorein_N | 2..>94 | CDD:463646 | 30/91 (33%) |
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 100..133 | 3/32 (9%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1262..1303 | 2/40 (5%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1616..1637 | 4/20 (20%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1735..1770 | 5/34 (15%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2048..2067 | 9/29 (31%) | |||
| SHR-BD | <2605..>2685 | CDD:461974 | 21/95 (22%) | ||
| VPS13_C | 3557..3703 | CDD:465310 | 37/145 (26%) | ||
| ATG_C | 3716..3809 | CDD:462761 | 20/92 (22%) | ||
| Localizes the protein to the Golgi apparatus. /evidence=ECO:0000250|UniProtKB:Q7Z7G8 | 3880..3993 | 6/23 (26%) |