| Sequence 1: | NP_610299.2 | Gene: | Vps13 / 35693 | FlyBaseID: | FBgn0033194 | Length: | 3321 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_056193.2 | Gene: | VPS13D / 55187 | HGNCID: | 23595 | Length: | 4388 | Species: | Homo sapiens |
| Alignment Length: | 4580 | Identity: | 848/4580 - (18%) |
|---|---|---|---|
| Similarity: | 1483/4580 - (32%) | Gaps: | 1625/4580 - (35%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2 VFEAVVADVLNKVLGDYIENLDRNQLKIGIWGGDVVLQNLKIRENALDELDLPVQLIYGYLGKLV 66
Fly 67 LKIPWKNLYSQPVIVNIEDLYVLVSPNNNVQYNAEKEAKYEMDLKKAALDALEAARKKELEMDQP 131
Fly 132 KADAGFAEKLTAQIVNNLQVQITNVHLRYEDTTTTGS-PFSFGISLHELELYTTDCDWEKCYMAQ 195
Fly 196 QASQVFKIANLSCLSAYLNCGGQLYANNKSDLSQ-QFKTNIACKETKPNYNYVLGPISCNAKLKL 259
Fly 260 NMNPELDDPPF---EKPKIDLTLEMEKLNVGLTNTQFDNLMKLGDAMNRQQLGIPYRKYRPYNIP 321
Fly 322 YKGHARDWWHFAITSILEEEVRKPRESWTWGHIKTHRER-CNTYAQKYKEQCLSKKPSAVLT--- 382
Fly 383 --ETCRLLETELDVFNLLLIRQRVNIEIAKQRE-----------------AVPEQKSG------- 421
Fly 422 --WFSGW-GWGGGAKKDDQTTSQKLVEKFEAAMTSEEKEKMY--RAIGYQENAKPTD-------- 473
Fly 474 LPESYEAIRMNFKLIALEVGLYKDERNSSAATKDFHELPSLVLLNFSMATALITQRPAAEAISII 538
Fly 539 AGMREIKVTGL------TRNDYTPLLV-------ESKITDEFNL--------------------L 570
Fly 571 EVFFETNPLDKLCDQRVKVVARPLQITYDAPTILALINAFQTPGDVTLSKF----------EDAA 625
Fly 626 STKISNFKERSATGMQYMIDKKAVLD-----------VDILLMPNILVVPHKGVYDAGNVSLLVV 679
Fly 680 SMGQVHLSS---QPRRESNKLQHLFSAGED---KDEILKT------------------------- 713
Fly 714 -------------VMENAYDRFTVAVDDVQMLVVRAGEPWQNALAEANSTEMHVLRP--VSLKVT 763
Fly 764 AALCVVDNDPRLPNIKVDIDLPAILVNVSEDRIFLAIKVATSIPLPEQK---------------- 812
Fly 813 -----EPASRLTQT--------------------------------------------------- 821
Fly 822 ----------------------------------------------------------------- 821
Fly 822 -----NSRSSMSIS-----------------NFINKE---------------------------- 836
Fly 837 -VKKIGPSASGSSASKD-----PLLDE-------------------------------------- 857
Fly 858 ---------------------IIQYTSLDVNFSLG------------------------------ 871
Fly 872 ------EINFVLFQ---------------SSRKC------------------------------- 884
Fly 885 ---------------------ETSPDVSIEFLTPDGDVLPSQLTE-------------------- 908
Fly 909 --NIQEPIEELP--PTPPQQI-----------------------LSIDIRRL------------- 933
Fly 934 ------------------------EAHFVSKTY-----------------------------ESV 945
Fly 946 ATVKLG--DI---------------------------------------NLRQY-------DCQD 962
Fly 963 SDMDVLDVIYTPKQENSSNYLFTVSCTIADKSSPEFSTK-YNSTEQ------------------- 1007
Fly 1008 --------LVVANFEV-----------LQIVLHQECLQRIMEVVNNFQRNLDLVLSSTRPR---- 1049
Fly 1050 -------DRMGSIGGGD--GIKRTLNVILEDTEEIM------TTDQMKRRKK------------- 1086
Fly 1087 --------------------------------------------------------TRRTHVV-- 1093
Fly 1094 ----------------------ETVKVRVIANLD----------------QVGLVLTGRKRPIAE 1120
Fly 1121 MNVKKFVSSLIIKSSYTEVNIGLK-DIQVLDLNPYTIH----KNILSIVGKDAFNCQIVIYNKEE 1180
Fly 1181 TQDYNSDDMKITVDIGCMKIIFLNWFVAGVMNFLNNFTAAQATIS-QAGAAAAESARQKAMDAYE 1244
Fly 1245 TATRMKLNIRIKAPIIIVPIGSQDRNALLLDLGLLELTNN------------------------- 1284
Fly 1285 -----------------------------------------------------TVEV---AVAEE 1293
Fly 1294 ERLAVIDEIKLQICDVKI----------SKIVLLDGNESTVDEVDAEVGFLSKF-------NMMN 1341
Fly 1342 PMSCTLSITRNLSYTWYRDVPELNLSGRLKSIELTLFADDYALVMLVLNRNLNEGLEEFPPSEEA 1406
Fly 1407 PQEAQVRP-ERRNSRAGRLSRTVQVSPIREKIHESIKFNFQFDGVVINLME---GEGAG-LARFG 1466
Fly 1467 IYFLSVKGTKLDNGTLSTSVVLCNIQMDDMRSNSKSQIRQYLSRKDWVQPKLDTDEIIDACY--- 1528
Fly 1529 ------NERNFMVDVTAIIKEDDTFAEVRVRGFDLIVCIDFLLKLTTFLTLPPEENPRESVYIKP 1587
Fly 1588 APVSETARDTKHSIRSSAIL--AAQELVPVESSSHEVPN-RKMNLILHIDEPDIILVENLEDLNT 1649
Fly 1650 SCIIFNAQVHLNYRSINDKQIVNGQIDALKMYMCAFLPERREMTRHYILHPCVISLQ----GSTP 1710
Fly 1711 EEEG-------------MHISLKLSDIIINVSPATIELL---------------NKAMLSVSSGT 1747
Fly 1748 MTKCA--IAEESRNYSNLWHQHHFH-------SRTYWFTKVEQGVDALEAEQRSVSTDNEKQKTE 1803
Fly 1804 KCVIE----IPSITLVIES--GVGYYTKPLIS-----------------LDTRITAVFNNWSR-- 1843
Fly 1844 -------SLTAHGSLTLNMNYYNQALAEWEPIIELNEVIGRNGVREYTPWELKFEMGMEKVQSEL 1901
Fly 1902 EDDAEQQAMHMNIHSAETLEITLSKTCLGLLSELAEAFSQAIDQNGLTKPDIVAPYV-------- 1958
Fly 1959 --LENDTGFDVN---------------------LNLRKGIFTLHEV----------------HRG 1984
Fly 1985 GTPVGA--NSTLLMVAQSEEVDPSVI---------KTCTIS------TGGRAYLQTKDLSTLSEE 2032
Fly 2033 DSED---YTLYVTIGDINKEIALPVSKSDTRFF-------NLMRST------------------S 2069
Fly 2070 HEPWGIISEVKQEYGTTKV-NIHGVVSVHNHFTTGLNIYRRNP-APTAQCFEDIFVGRVRPGEVF 2132
Fly 2133 HVPLH----AIYAESKDL--FFSMRGYRRSVQGISW------ASNPSDLNYSHQLHCDPTNTFEP 2185
Fly 2186 LIMNARRSKSEVY--------FENTNKYTLLSAFYTIHLRPPLYLRNSLPINIQVSVAGCSVR-- 2240
Fly 2241 ----KEDGLDAQSSQRFVDRGYRKEDFLDYGEKPVNSGDVLHLPTVRLASKGKESKSFLVVRLVQ 2301
Fly 2302 YLEKDWSCATEIWDYTDDVITWTFSSYDSEMKVDMDLYVKTENRHGSLMLTLFSPFWMINKTGMM 2366
Fly 2367 LTYKSETTSVEVLYHPPEYS-----GPILFTFRDKLFFDKKKASIRIDNG-------QWSEKIPL 2419
Fly 2420 DVAGSVGEVICFANNQK----YPVGVHNHLTQNSL--TKQITFIPFYIVCNKCHFDI-----ELQ 2473
Fly 2474 EQSRPADP--WLHLEPNEMEPL-WPRNDTKNNLVVR---VDGKI-TPAFDFTEVICTLLKLEDS- 2530
Fly 2531 -KYGGINVDVQTTEGGVY-ITFTDYKPADAPGLLINHTGKQIVYHEKGTKNEHI---LNAKSTIM 2590
Fly 2591 YAWDDPTGPKML---VFGTNKEETDLKRDGIGEVIMQDGGKVLWVSFL--------DGL------ 2638
Fly 2639 ---------------------QRVLLFTE-----------------------------NESIANR 2653
Fly 2654 TESTASL------------------------QSITQSIDLR-------IHGI------GLS---- 2677
Fly 2678 ----VINNETGLDIL--------YL--------GVTSSGII----WESKKVT----KNRFKELTI 2714
Fly 2715 NENALLEIEYQKYLVHKSVNDVQTYKLDNKFPIDFDLMILKKTVERNLRRSF------YPAIWLS 2773
Fly 2774 RKSSPFQSQLHVKINRIQVDNQFLDPIFPVVL--APIPPPKSVASTTSLKPFIECSMVQRIMPNS 2836
Fly 2837 TVRQFKYARILIQEFLFKVDLNFLTAIAEMFAKEVSDEAAAKQFRQDVESIELPLSAFFEEHSLE 2901
Fly 2902 EQKSFYDNLHLGPLKIHVSFSMAGSDTKALPGFLGSLVQGVGVTLTDVNDVVFRLAFFEREYQFF 2966
Fly 2967 SQKQLINEITSHYTGQALKQLYVLVLGLDVLGNPYGLVVGLKKGVEDLFYEPFQGAIQGPGEFAE 3031
Fly 3032 GLVL--GVKSLFGHTVGGAAGAVSKITGAMGKGLAALTFDEDYQKKRRQGIQNKPKNFHEGLARS 3094
Fly 3095 SKGLVMGFVDGVTGVVTKPVTGAR-DNGVEGFFKGLGKGAIGLVARPTAGVVDFASGSFEAVKRA 3158
Fly 3159 ADAS---EDVKRMRPPRFQHYDFVLRP-YCLMEATGNKIMKETDKGKFATTDN-----FIHCEEI 3214
Fly 3215 IQKSEYLVVTNYRVM-------YVQRNEMF 3237 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Vps13 | NP_610299.2 | MRS6 | 4..>1969 | CDD:227376 | 520/3020 (17%) |
| VPS13 | 137..370 | CDD:465309 | 62/238 (26%) | ||
| SHR-BD | 2351..2599 | CDD:461974 | 63/283 (22%) | ||
| MRS6 | <2701..3232 | CDD:227376 | 136/561 (24%) | ||
| VPS13_C | 2904..3074 | CDD:465310 | 41/171 (24%) | ||
| VPS13D | NP_056193.2 | MRS6 | 1..>1269 | CDD:227376 | 253/1319 (19%) |
| VPS13 | 137..356 | CDD:465309 | 60/235 (26%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 745..796 | 9/54 (17%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1563..1582 | 4/18 (22%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1741..1771 | 3/29 (10%) | |||
| VPS13_mid_rpt | 1964..>2055 | CDD:465311 | 23/94 (24%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2070..2108 | 0/37 (0%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2122..2145 | 2/22 (9%) | |||
| MRS6 | <2145..>3102 | CDD:227376 | 199/1056 (19%) | ||
| UBA_VP13D | 2642..2677 | CDD:270491 | 4/39 (10%) | ||
| SHR-BD | 3276..3559 | CDD:461974 | 64/285 (22%) | ||
| beta-trefoil_Ricin_VPS13D | 3614..3774 | CDD:467331 | 22/159 (14%) | ||
| MRS6 | <3836..4298 | CDD:227376 | 130/514 (25%) |