Sequence 1: | NP_001260781.1 | Gene: | Vps13 / 35693 | FlyBaseID: | FBgn0033194 | Length: | 3321 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_056193.2 | Gene: | VPS13D / 55187 | HGNCID: | 23595 | Length: | 4388 | Species: | Homo sapiens |
Alignment Length: | 4580 | Identity: | 848/4580 - (18%) |
---|---|---|---|
Similarity: | 1483/4580 - (32%) | Gaps: | 1625/4580 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 VFEAVVADVLNKVLGDYIENLDRNQLKIGIWGGDVVLQNLKIRENALDELDLPVQLIYGYLGKLV 66
Fly 67 LKIPWKNLYSQPVIVNIEDLYVLVSPNNNVQYNAEKEAKYEMDLKKAALDALEAARKKELEMDQP 131
Fly 132 KADAGFAEKLTAQIVNNLQVQITNVHLRYEDTTTTGS-PFSFGISLHELELYTTDCDWEKCYMAQ 195
Fly 196 QASQVFKIANLSCLSAYLNCGGQLYANNKSDLSQ-QFKTNIACKETKPNYNYVLGPISCNAKLKL 259
Fly 260 NMNPELDDPPF---EKPKIDLTLEMEKLNVGLTNTQFDNLMKLGDAMNRQQLGIPYRKYRPYNIP 321
Fly 322 YKGHARDWWHFAITSILEEEVRKPRESWTWGHIKTHRER-CNTYAQKYKEQCLSKKPSAVLT--- 382
Fly 383 --ETCRLLETELDVFNLLLIRQRVNIEIAKQRE-----------------AVPEQKSG------- 421
Fly 422 --WFSGW-GWGGGAKKDDQTTSQKLVEKFEAAMTSEEKEKMY--RAIGYQENAKPTD-------- 473
Fly 474 LPESYEAIRMNFKLIALEVGLYKDERNSSAATKDFHELPSLVLLNFSMATALITQRPAAEAISII 538
Fly 539 AGMREIKVTGL------TRNDYTPLLV-------ESKITDEFNL--------------------L 570
Fly 571 EVFFETNPLDKLCDQRVKVVARPLQITYDAPTILALINAFQTPGDVTLSKF----------EDAA 625
Fly 626 STKISNFKERSATGMQYMIDKKAVLD-----------VDILLMPNILVVPHKGVYDAGNVSLLVV 679
Fly 680 SMGQVHLSS---QPRRESNKLQHLFSAGED---KDEILKT------------------------- 713
Fly 714 -------------VMENAYDRFTVAVDDVQMLVVRAGEPWQNALAEANSTEMHVLRP--VSLKVT 763
Fly 764 AALCVVDNDPRLPNIKVDIDLPAILVNVSEDRIFLAIKVATSIPLPEQK---------------- 812
Fly 813 -----EPASRLTQT--------------------------------------------------- 821
Fly 822 ----------------------------------------------------------------- 821
Fly 822 -----NSRSSMSIS-----------------NFINKE---------------------------- 836
Fly 837 -VKKIGPSASGSSASKD-----PLLDE-------------------------------------- 857
Fly 858 ---------------------IIQYTSLDVNFSLG------------------------------ 871
Fly 872 ------EINFVLFQ---------------SSRKC------------------------------- 884
Fly 885 ---------------------ETSPDVSIEFLTPDGDVLPSQLTE-------------------- 908
Fly 909 --NIQEPIEELP--PTPPQQI-----------------------LSIDIRRL------------- 933
Fly 934 ------------------------EAHFVSKTY-----------------------------ESV 945
Fly 946 ATVKLG--DI---------------------------------------NLRQY-------DCQD 962
Fly 963 SDMDVLDVIYTPKQENSSNYLFTVSCTIADKSSPEFSTK-YNSTEQ------------------- 1007
Fly 1008 --------LVVANFEV-----------LQIVLHQECLQRIMEVVNNFQRNLDLVLSSTRPR---- 1049
Fly 1050 -------DRMGSIGGGD--GIKRTLNVILEDTEEIM------TTDQMKRRKK------------- 1086
Fly 1087 --------------------------------------------------------TRRTHVV-- 1093
Fly 1094 ----------------------ETVKVRVIANLD----------------QVGLVLTGRKRPIAE 1120
Fly 1121 MNVKKFVSSLIIKSSYTEVNIGLK-DIQVLDLNPYTIH----KNILSIVGKDAFNCQIVIYNKEE 1180
Fly 1181 TQDYNSDDMKITVDIGCMKIIFLNWFVAGVMNFLNNFTAAQATIS-QAGAAAAESARQKAMDAYE 1244
Fly 1245 TATRMKLNIRIKAPIIIVPIGSQDRNALLLDLGLLELTNN------------------------- 1284
Fly 1285 -----------------------------------------------------TVEV---AVAEE 1293
Fly 1294 ERLAVIDEIKLQICDVKI----------SKIVLLDGNESTVDEVDAEVGFLSKF-------NMMN 1341
Fly 1342 PMSCTLSITRNLSYTWYRDVPELNLSGRLKSIELTLFADDYALVMLVLNRNLNEGLEEFPPSEEA 1406
Fly 1407 PQEAQVRP-ERRNSRAGRLSRTVQVSPIREKIHESIKFNFQFDGVVINLME---GEGAG-LARFG 1466
Fly 1467 IYFLSVKGTKLDNGTLSTSVVLCNIQMDDMRSNSKSQIRQYLSRKDWVQPKLDTDEIIDACY--- 1528
Fly 1529 ------NERNFMVDVTAIIKEDDTFAEVRVRGFDLIVCIDFLLKLTTFLTLPPEENPRESVYIKP 1587
Fly 1588 APVSETARDTKHSIRSSAIL--AAQELVPVESSSHEVPN-RKMNLILHIDEPDIILVENLEDLNT 1649
Fly 1650 SCIIFNAQVHLNYRSINDKQIVNGQIDALKMYMCAFLPERREMTRHYILHPCVISLQ----GSTP 1710
Fly 1711 EEEG-------------MHISLKLSDIIINVSPATIELL---------------NKAMLSVSSGT 1747
Fly 1748 MTKCA--IAEESRNYSNLWHQHHFH-------SRTYWFTKVEQGVDALEAEQRSVSTDNEKQKTE 1803
Fly 1804 KCVIE----IPSITLVIES--GVGYYTKPLIS-----------------LDTRITAVFNNWSR-- 1843
Fly 1844 -------SLTAHGSLTLNMNYYNQALAEWEPIIELNEVIGRNGVREYTPWELKFEMGMEKVQSEL 1901
Fly 1902 EDDAEQQAMHMNIHSAETLEITLSKTCLGLLSELAEAFSQAIDQNGLTKPDIVAPYV-------- 1958
Fly 1959 --LENDTGFDVN---------------------LNLRKGIFTLHEV----------------HRG 1984
Fly 1985 GTPVGA--NSTLLMVAQSEEVDPSVI---------KTCTIS------TGGRAYLQTKDLSTLSEE 2032
Fly 2033 DSED---YTLYVTIGDINKEIALPVSKSDTRFF-------NLMRST------------------S 2069
Fly 2070 HEPWGIISEVKQEYGTTKV-NIHGVVSVHNHFTTGLNIYRRNP-APTAQCFEDIFVGRVRPGEVF 2132
Fly 2133 HVPLH----AIYAESKDL--FFSMRGYRRSVQGISW------ASNPSDLNYSHQLHCDPTNTFEP 2185
Fly 2186 LIMNARRSKSEVY--------FENTNKYTLLSAFYTIHLRPPLYLRNSLPINIQVSVAGCSVR-- 2240
Fly 2241 ----KEDGLDAQSSQRFVDRGYRKEDFLDYGEKPVNSGDVLHLPTVRLASKGKESKSFLVVRLVQ 2301
Fly 2302 YLEKDWSCATEIWDYTDDVITWTFSSYDSEMKVDMDLYVKTENRHGSLMLTLFSPFWMINKTGMM 2366
Fly 2367 LTYKSETTSVEVLYHPPEYS-----GPILFTFRDKLFFDKKKASIRIDNG-------QWSEKIPL 2419
Fly 2420 DVAGSVGEVICFANNQK----YPVGVHNHLTQNSL--TKQITFIPFYIVCNKCHFDI-----ELQ 2473
Fly 2474 EQSRPADP--WLHLEPNEMEPL-WPRNDTKNNLVVR---VDGKI-TPAFDFTEVICTLLKLEDS- 2530
Fly 2531 -KYGGINVDVQTTEGGVY-ITFTDYKPADAPGLLINHTGKQIVYHEKGTKNEHI---LNAKSTIM 2590
Fly 2591 YAWDDPTGPKML---VFGTNKEETDLKRDGIGEVIMQDGGKVLWVSFL--------DGL------ 2638
Fly 2639 ---------------------QRVLLFTE-----------------------------NESIANR 2653
Fly 2654 TESTASL------------------------QSITQSIDLR-------IHGI------GLS---- 2677
Fly 2678 ----VINNETGLDIL--------YL--------GVTSSGII----WESKKVT----KNRFKELTI 2714
Fly 2715 NENALLEIEYQKYLVHKSVNDVQTYKLDNKFPIDFDLMILKKTVERNLRRSF------YPAIWLS 2773
Fly 2774 RKSSPFQSQLHVKINRIQVDNQFLDPIFPVVL--APIPPPKSVASTTSLKPFIECSMVQRIMPNS 2836
Fly 2837 TVRQFKYARILIQEFLFKVDLNFLTAIAEMFAKEVSDEAAAKQFRQDVESIELPLSAFFEEHSLE 2901
Fly 2902 EQKSFYDNLHLGPLKIHVSFSMAGSDTKALPGFLGSLVQGVGVTLTDVNDVVFRLAFFEREYQFF 2966
Fly 2967 SQKQLINEITSHYTGQALKQLYVLVLGLDVLGNPYGLVVGLKKGVEDLFYEPFQGAIQGPGEFAE 3031
Fly 3032 GLVL--GVKSLFGHTVGGAAGAVSKITGAMGKGLAALTFDEDYQKKRRQGIQNKPKNFHEGLARS 3094
Fly 3095 SKGLVMGFVDGVTGVVTKPVTGAR-DNGVEGFFKGLGKGAIGLVARPTAGVVDFASGSFEAVKRA 3158
Fly 3159 ADAS---EDVKRMRPPRFQHYDFVLRP-YCLMEATGNKIMKETDKGKFATTDN-----FIHCEEI 3214
Fly 3215 IQKSEYLVVTNYRVM-------YVQRNEMF 3237 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13 | NP_001260781.1 | Chorein_N | 4..113 | CDD:315323 | 40/108 (37%) |
VPS13 | 140..370 | CDD:318996 | 62/235 (26%) | ||
VPS13_mid_rpt | 574..807 | CDD:318998 | 61/299 (20%) | ||
SHR-BD | 2349..2600 | CDD:310922 | 64/286 (22%) | ||
VPS13 | <2701..3232 | CDD:330393 | 136/561 (24%) | ||
VPS13_C | 2904..3074 | CDD:318997 | 41/171 (24%) | ||
VPS13D | NP_056193.2 | Chorein_N | 3..112 | CDD:289396 | 40/108 (37%) |
VPS13 | 139..356 | CDD:293513 | 60/233 (26%) | ||
VPS13_mid_rpt | 614..894 | CDD:293515 | 61/290 (21%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 745..796 | 9/54 (17%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1563..1582 | 4/18 (22%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1741..1771 | 3/29 (10%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2070..2108 | 0/37 (0%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2122..2145 | 2/22 (9%) | |||
UBA_VP13D | 2642..2677 | CDD:270491 | 4/39 (10%) | ||
SHR-BD | 3276..3559 | CDD:284143 | 64/285 (22%) | ||
VPS13_C | 3984..4129 | CDD:293514 | 41/168 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5043 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D4159at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.850 |