Sequence 1: | NP_001260781.1 | Gene: | Vps13 / 35693 | FlyBaseID: | FBgn0033194 | Length: | 3321 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_065872.1 | Gene: | VPS13C / 54832 | HGNCID: | 23594 | Length: | 3753 | Species: | Homo sapiens |
Alignment Length: | 3960 | Identity: | 1117/3960 - (28%) |
---|---|---|---|
Similarity: | 1786/3960 - (45%) | Gaps: | 893/3960 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MVFEAVVADVLNKVLGDYIENLDRNQLKIGIWGGDVVLQNLKIRENALDELDLPVQLIYGYLGKL 65
Fly 66 VLKIPWKNLYSQPVIVNIEDLYVLVSPNNNVQYNAEKEAKYEMDLKKAALDALEAARKKELE--- 127
Fly 128 ----------------------------------------MDQP---KADAGFAEKLTAQIVNNL 149
Fly 150 QVQITNVHLRYEDTTTTGS-PFSFGISLHELELYTTDCDWEKCYMAQQASQVFKIANLSCLSAY- 212
Fly 213 -LNCGGQLYANNKSDLSQQFKTNIACK-ETKPNYNYVLGPISCNAKLKLNMNPELDDPPFEKPKI 275
Fly 276 DLTLEMEKLNVGLTNTQFDNLMKLGDAMNRQQLGIPYRKYRPYNIPYKGHARDWWHFAITSILEE 340
Fly 341 EVRKPRESWTWGHIKTHRERCNTYAQKYKEQCLSKKPSAVLTETCRLLETELDVFNLLLIRQRVN 405
Fly 406 IEI-------AKQREAVPEQKSGWFSG-WGWGGGAKKDDQTTSQKLVEKFEAAMTSEEKEKMYRA 462
Fly 463 IGYQENAKPTDLPESYEAIRMNFKLIALEVGLYKDERNSSAATKDFHELPSLVLLNFSMATALIT 527
Fly 528 QRPAAEAISIIAGMREIKVTGLTRNDYTPLLVESKITDEFNLLEVFFETNPLDKLCDQRVKVVAR 592
Fly 593 PLQITYDAPTILALINAFQTPGDVTLSKFEDAASTKISNFKERSATGMQYMIDKKAVLDVDILLM 657
Fly 658 PNILVVPHKGVYDAGNVSLLVVSMGQVHLSSQPRRESNKLQHLFSAGEDKDEILKTVMENAYDRF 722
Fly 723 TVAVDDVQMLVVRAGEPWQNALAEANSTEMHVLRPVSLKVTAALCVVDNDPRLPNIKVDIDLPAI 787
Fly 788 LVNVSEDRIFLAIKVATSIPLPEQKEPASRLTQTNS----------------------------- 823
Fly 824 -------------------RSSMSISN--FIN------------------KE--------VKKIG 841
Fly 842 PSAS-----------------------GS--------SASKDPLLDEI-IQYTSLDVN------- 867
Fly 868 -----------FS-----------LGEINFV---------------------------------- 876
Fly 877 ---------------------------------------------------LF------------ 878
Fly 879 ----------------------------------------------------------------- 878
Fly 879 ----------------QSSRKCETS---------------------------------------- 887
Fly 888 --------------------------------------------PD------VSIEFLT------ 896
Fly 897 ------------------------PDGDVLPSQLTENIQEPIEELPPTPP--------------- 922
Fly 923 ----------------QQILSIDIRRLEAHF--------------------------------VS 939
Fly 940 KTYESVATVKLGDINLRQYDCQDSDMDVLDVIYTPKQENSSNY----LFTVSCTIADKSSPEFST 1000
Fly 1001 KYNSTEQLVVANFEVLQIVLHQECLQRIMEVVNNFQRNLDLVLSSTRPRDRMGSIGGGDGIKRTL 1065
Fly 1066 NVILEDTEEIMTTDQMKRRKKTRRTHVVETVK----------VRVIANLDQVGLVLTGRKRPIAE 1120
Fly 1121 MNVKKFVSSLIIKSSYTEVNIGLKDIQVLDLNPYTIHKNILSIVGKDAFNCQIVIY----NKEET 1181
Fly 1182 QDYNSDDMKITVDIGCMKIIFLNWFVAGVMNFLNNFTAAQATISQAGAAAAESARQKAMDAYETA 1246
Fly 1247 TRMKLNIRIKAPIIIVPIGSQDRNALLLDLGLLELTNNTVEVAVAEEERLAVIDEIKLQICDVKI 1311
Fly 1312 SKIVLLDGNESTVDEVDAEVGFLSKFNMMNPMSCTLSITRNLSYTWYRDVPELNLSGRLKSIELT 1376
Fly 1377 LFADDYALVMLVLNRNLNEGLEEFPPSEEAPQEAQVRPERRNSRAGRLSRTVQVSPIREKIHE-- 1439
Fly 1440 -------------SIKFNFQFDGVVINL------------MEGEGAGLARFGIYFLSVKGTKLDN 1479
Fly 1480 GTLSTSVVLCNIQMDDMRSNSKSQIRQYLSRKDWVQPKLDTDEIIDACYNERNFMVDVTAIIKED 1544
Fly 1545 DTFAEVRVRGFDLIVC--IDFLLKLTTFLTLPPEENPRESVYIKPAPVS--ETARDTKHSIRSSA 1605
Fly 1606 ILAAQELVPVESSSHEVPNRKMNLILHIDEPDIILVENLEDLNTSCIIFNAQVHLNYRSINDKQI 1670
Fly 1671 VNGQIDALKMYMCAFLPERREMTRHYILHPCVISLQGSTPEEEGMHISLKLSDIIINVSPATIEL 1735
Fly 1736 LNKAMLSVSSGTMTKCAIAEESRNYSNLWHQHHFHSRTYWFTKVEQGVDALEAEQRSVSTDNEKQ 1800
Fly 1801 KTEKCVIEIPSITLVIESGVGYYTKPLISLDTRITAVFNNWSRSLTAHGSLTLNMNYYNQALAEW 1865
Fly 1866 EPIIELNEVIGRNGVREYTPWELKFEMGMEKVQSEL----EDDAEQQAMHMNIHSAETLEITLSK 1926
Fly 1927 TCLGLLSELAEAFSQAIDQNGLTKPDIVAPYVLENDTGFDV----NLNLRKGIFTLHEVHRGGTP 1987
Fly 1988 VGANSTLLMVAQSEEVDPSVIKTCTISTGGRAYLQTKDLSTLSEEDSEDYTLYVTIGDINKEIAL 2052
Fly 2053 PVSKSDTRFFNLMRSTSHEPWGIISEVKQEYGTTKVNIHGVVSVHNHFTTGLNIYR--RNPAPTA 2115
Fly 2116 QCFEDIFVGRVRPGEVFHVPLHAIYAESKDLFFSMRG-----YRRSVQGISWASNPSDLNYSHQL 2175
Fly 2176 HC-----DPTNTFEPLIMNARRSKSEVYFENTNKYTLLSAFYTIHLRPPLYLRNSLPINIQVSVA 2235
Fly 2236 GCSVRKEDGLDAQSSQRFVDRGYRKEDFLDYGEKPVNSGDVLHLPTVRLASKGKESKSFLVVRLV 2300
Fly 2301 QYLEKDWSCATEIWDYTDDVITWTFSSYDSEM-KVDMDLYVKTENRHGS-LMLTLFSPFWMINKT 2363
Fly 2364 GMMLTYKSETTSVEVLYHPPEYSGPILFTFRDKLFFDKKKASIRIDNGQWSEKIPLDVAGSVGEV 2428
Fly 2429 ICFANNQKYPVGVHNHLTQNSLTKQITFIPFYIVCNKCHFDIELQE----QSRPADPWLHLEPNE 2489
Fly 2490 MEPLWPRNDTKNNLVVRV---DGKITPAFDFTEVICTLLKLEDSKYGGINVDVQTTEGGVYITFT 2551
Fly 2552 DYKPADAPGLLINHTGKQIV-YHEKGTKNEHILNAKSTIMYAWDDPTGPKML--VFGTNKEETDL 2613
Fly 2614 KRDGIGEVIMQDGGKVLWVSFLDGLQRVLLFTENESIANRTESTASLQSITQSIDLRIHGIGLSV 2678
Fly 2679 INNETGLDILYLGVTSSGIIWESKKVTKNRFKELTINENALLEIEYQKYLVHKSVNDVQTYKLDN 2743
Fly 2744 KFPIDFDL--MILKKTVERNLRRSFYPAIWLSRKSSPFQSQLHVKINRIQVDNQFLDPIFPVVLA 2806
Fly 2807 PIPPPKSVASTTSLKPFIECSMVQRIMPNSTVRQFKYARILIQEFLFKVDLNFLTAIAEMFAKEV 2871
Fly 2872 SDEA---AAKQFRQDVESIELPLSAFFEEHSLEEQK--SFYDNLHLGPLKIHVSFSMAG----SD 2927
Fly 2928 TKALPGF----LGSLVQGVGVTLTDVNDVVFRLAFFEREYQFFSQKQLINEITSHYTGQALKQLY 2988
Fly 2989 VLVLGLDVLGNPYGLVVGLKKGVEDLFYEPFQGAIQGPGEFAEGLVLGVKSLFGHTVGGAAGAVS 3053
Fly 3054 KITGAMGKGLAALTFDEDYQKKRRQGIQNKPKNFHEGLARSSKGLVMGFVDGVTGVVTKPVTGAR 3118
Fly 3119 DNGVEGFFKGLGKGAIGLVARPTAGVVDFASGSFEAVKRAADASEDVKRMRPPRFQHYDFVLRPY 3183
Fly 3184 CLMEATGNKIMKETDKGKFATTDNFIHCEEIIQKSEYLVVTNYRVMYVQRNEMFGVWTSLWSYLW 3248
Fly 3249 NEISSVAATARGV-QFTVKTDGKKVLGLFSSKESP-----RKLVL---VADERKRDALVD 3299 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13 | NP_001260781.1 | Chorein_N | 4..113 | CDD:315323 | 61/108 (56%) |
VPS13 | 140..370 | CDD:318996 | 81/233 (35%) | ||
VPS13_mid_rpt | 574..807 | CDD:318998 | 77/232 (33%) | ||
SHR-BD | 2349..2600 | CDD:310922 | 99/258 (38%) | ||
VPS13 | <2701..3232 | CDD:330393 | 246/545 (45%) | ||
VPS13_C | 2904..3074 | CDD:318997 | 102/179 (57%) | ||
VPS13C | NP_065872.1 | Chorein_N | 4..113 | CDD:289396 | 61/108 (56%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 150..176 | 2/25 (8%) | |||
VPS13 | 185..413 | CDD:293513 | 80/232 (34%) | ||
VPS13_mid_rpt | 613..833 | CDD:293515 | 76/231 (33%) | ||
MRS6 | 1046..>2612 | CDD:227376 | 343/1707 (20%) | ||
VPS13_mid_rpt | <1238..1368 | CDD:293515 | 7/129 (5%) | ||
VPS13_mid_rpt | 1690..1882 | CDD:293515 | 62/203 (31%) | ||
SHR-BD | 2764..3016 | CDD:284143 | 97/256 (38%) | ||
WWE | 3116..3181 | CDD:295449 | 22/69 (32%) | ||
VPS13_C | 3323..3500 | CDD:293514 | 102/176 (58%) | ||
ATG_C | 3507..3582 | CDD:286423 | 40/74 (54%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165149788 | |
Domainoid | 1 | 1.000 | 215 | 1.000 | Domainoid score | I2708 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG54975 | |
OrthoDB | 1 | 1.010 | - | - | D4159at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001282 | |
OrthoInspector | 1 | 1.000 | - | - | otm41329 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101020 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR16166 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 1 | 1.000 | - | - | X990 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
11 | 10.890 |