DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps13 and Vps13d

DIOPT Version :9

Sequence 1:NP_001260781.1 Gene:Vps13 / 35693 FlyBaseID:FBgn0033194 Length:3321 Species:Drosophila melanogaster
Sequence 2:NP_001382518.1 Gene:Vps13d / 313825 RGDID:1308403 Length:4390 Species:Rattus norvegicus


Alignment Length:4575 Identity:832/4575 - (18%)
Similarity:1467/4575 - (32%) Gaps:1613/4575 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VFEAVVADVLNKVLGDYIENLDRNQLKIGIWGGDVVLQNLKIRENALDELDLPVQLIYGYLGKLV 66
            :.|.:||.|||..||.|:.||:.:||.:.:..|.|.|:||.::::||.||:||.::..|.:||:.
  Rat     1 MLEGLVAWVLNTYLGKYVNNLNTDQLSVALLKGAVELENLPLKKDALKELELPFEVKAGLIGKVT 65

  Fly    67 LKIPWKNLYSQPVIVNIEDLYVLVSPNNNVQYNAEKEAKYEMDLKKAALDALEAARKKELEMDQP 131
            |:||:...:..|.:::|..|:|:.:|.....:|.|||...|.:.||..|.|||...|.|..  |.
  Rat    66 LQIPFYRPHVDPWVISISGLHVIGAPEKIQDFNDEKEKLLERERKKVLLQALEERWKSERR--QQ 128

  Fly   132 KADA---GFAEKLTAQIVNNLQVQITNVHLRYEDTTTTGS-PFSFGISLHELELYTTDCDWEKCY 192
            |.::   .....:..:||.|::::|.:||||:||..|..| ||:|||.:..:.:.....:..:..
  Rat   129 KGESYWYSVTASVVTRIVENIELKIQDVHLRFEDGLTNPSHPFAFGICIKNVSMQNAANEPVQKL 193

  Fly   193 MAQQASQVFKIANLSCLSAY--LNCGGQLYANNKSDLSQ-QFKTNIACKETKPNYNYVLGPISCN 254
            |.::...|.:      .|.|  :||      ....||.| :.:..:|......:::|:|.|:..:
  Rat   194 MRKKRLDVAE------FSIYWDVNC------TLLGDLPQAELQEAMARSMESRSHHYILEPVCAS 246

  Fly   255 AKLKLNMNPELDDPPF---EKPKIDLTLEMEKLNVGLTNTQFDNLMKLGDAMNRQQLGIPYRKYR 316
            |.||.|.:.|    |.   ..|:|:..:::|.:.:.|:..|:..:|.....:.|::..:.:||::
  Rat   247 ALLKRNCSKE----PLRSRHSPRIECDIQLETIPLKLSQLQYRQIMAFLKELERKERQVKFRKWK 307

  Fly   317 PYNIPYKGHARDWWHFAITSILEEEVRKPRESWTWGHIKTHRERCNTYAQKYKEQCLSKKPSAVL 381
            | .:....:.|:||:||:.:.| .|:|:.|:..||..: .||.|...:   |.::..:|....||
  Rat   308 P-KVAVSKNCREWWYFALNANL-YEIREQRKCCTWDFL-LHRARDAVF---YTDRYFNKLKGGVL 366

  Fly   382 T-----ETCRLLETELDVFNLLLIRQRVNIEIAKQREAV-----------------PEQKSG--- 421
            :     |.|| :|.|.....|.::|:.|:....||.|..                 |:...|   
  Rat   367 SADDKEEMCR-IEEEQSFEELKILRELVHDRFYKQEELAESLREPQFDSPGASPGDPDGSGGSGM 430

  Fly   422 ------WFSGW-GWGGGAKKDDQTTSQKLVEKFEAAMTSEEKEKMY--RAIGYQENAKPTD---- 473
                  ||.|| ||.|     .|:...|:.|    .:|:|..|...  ..:|.:|...||.    
  Rat   431 LQYLQSWFPGWGGWYG-----QQSPEGKVAE----GLTAESHEHWMPEDILGTEEFFDPTADASC 486

  Fly   474 ----LPESYEAIRMNFKLIALEVGLYKDERNSSAATKDFHELPSLVLLNFSMATALITQRPAAEA 534
                ....:...::|.:|....|.|...||.::.|.:.     :.:.|.||....|....|...:
  Rat   487 MNTYTKRDHVFAKLNVQLQRGTVTLLHQERGAAHANES-----AFMQLEFSDVKLLAESLPRRNS 546

  Fly   535 ISIIAGMREIKVTGL------TRNDYTPLLV-------ESKITDEFNL----------------- 569
            ..::     :::.||      |.....||||       ..:::..|.|                 
  Rat   547 SLLL-----VRLGGLFLRDLATEGTMFPLLVFPNPQKEVGRVSQSFGLQTASEDRSDQYSAADPD 606

  Fly   570 ---LEVFFETNPLDKLCDQRVKVVARPLQITYDAPTILALINAFQTPGDVTLSKF---------- 621
               .|:.:|.||:....::|:.|..|||.|.|: |..:..:..|...|.|..|.|          
  Rat   607 NPVFEMLYERNPVHSHFERRLHVSTRPLNIIYN-PQAIKKVADFFYKGKVHTSGFGYQSELELRV 670

  Fly   622 EDAASTKISNFKERSATGMQYMIDKKAVLD-----------VDILLMPNILVVPHKGVYDAGNVS 675
            .:||..:.:..|.::...::..:|:..|.|           :|| ..|.: :.|....:.  |..
  Rat   671 AEAARRQYNKLKMQTKAEIRQTLDRLLVGDFIEESKRWTVRLDI-SAPQV-IFPDDFTFK--NPV 731

  Fly   676 LLVVSMGQVHLS----------------------------------SQPRRESN----KLQHLFS 702
            |:||.:|::.|:                                  |.|..|:|    :....||
  Rat   732 LVVVDLGRMLLTNTQEDSRRKSGDDSASEENQFSDDEYKTPLATPPSTPPPETNSSNGEKTPPFS 796

  Fly   703 AGEDKDEILKT--VMENAYDRFTVAVDDVQMLVVRAGEPWQNALAEANSTEMHVLRP--VSLKVT 763
            ..|..:|.|:.  :....|:|:::...|:|::|.|..:.|:. :.:.:....||:..  |.|::.
  Rat   797 GVEFSEEQLQAHLMSTQMYERYSLTFMDLQVMVGRVRDNWKR-VQDIDVGPTHVVEKFNVHLQLE 860

  Fly   764 AALCVVDNDPRLPNIKVDIDLPAILVNVSEDRIFLAIKVATSIPLPEQK---------------- 812
            ..| :..:||:.|...:..:||.:.::::||:|.........:..||.|                
  Rat   861 RRL-IYTSDPKYPGAVLSGNLPDLKIHINEDKISALKNCFALLTTPETKPSDTQFREKIFPQEGP 924

  Fly   813 -----EPASRLTQ----------------------------------------------TNSR-- 824
                 :....|||                                              ||:.  
  Rat   925 RGSLQDSVMNLTQSIVMLEQHTREVLVESQLLLAEFKVNCMQLGVESSGRYISVLKVFGTNAHFV 989

  Fly   825 ----------------------------------------------------------------- 824
                                                                             
  Rat   990 KRPYDAEVSLTVHGLLLVDTMQTYGADFDLLMASHKNLSFDIPTGSLRDSRAQSPVSGPNVAFQT 1054

  Fly   825 -----------SSMSISNFINKE------------------------------------------ 836
                       :|:|:...:.||                                          
  Rat  1055 DVATLNDQSATTSVSLEKILTKEQESLIKLEYQFVSSECPSMNLDSTLQVISLQVNNLDIILNPE 1119

  Fly   837 --VKKIGPSASGSSASKD-----PLLDEI---------IQYT----------------------- 862
              |:.||.........||     ||:.::         :|.|                       
  Rat  1120 TIVELIGFLQKSFPKEKDDVSPQPLMTDLERSIMEQGTVQSTYEQNTEVAVEIHRLNLLLLRTVG 1184

  Fly   863 ---------------------------SLDVNFSLG----------------------------- 871
                                       |.|:|.|||                             
  Rat  1185 MSDGERHGRKIATASIGGTKVNVSMGSSFDMNGSLGCLQLMDLTQENVKNQYVVSIGNSIGYENI 1249

  Fly   872 -------EINFVLFQ---------------SSRKC------------------------------ 884
                   |..||..:               |.::|                              
  Rat  1250 VSDIGYFESVFVRMEDASLTEALSFTFAEKSKQECFLNLKMASLHYNHSAKFLKELTLSMDELEE 1314

  Fly   885 ----------------------ETSPDVSIEFLTPD--------------GDVLPSQ-------- 905
                                  |.|..||: |.||.              |..|||.        
  Rat  1315 NFRSMLKSAATKVTTVLATKTAEYSEMVSL-FETPKKTRDPFVLEENEIYGFGLPSPRSDTVKLI 1378

  Fly   906 LTENIQEPIEELP--PTPPQQI-----------------------LSIDIRRL------------ 933
            |..||:.|:..:|  |..|:.:                       |.::|:.:            
  Rat  1379 LNINIESPVVSIPRRPGSPELLVGHLGQIFIQNFVAGDDESRSDRLQVEIKDIKLYSLNCTQLAG 1443

  Fly   934 -------------------------EAHF-------------------------------VSKTY 942
                                     ||||                               :.:..
  Rat  1444 RDGAGPEVSRAFCPPSGSASVSSQEEAHFTRHDFFESLHRGQAFHILNNTTIQFKLEKIPIERET 1508

  Fly   943 E---SVATVKLGDINLRQYD-------------------------------------------CQ 961
            |   |::..:||..::.:.:                                           |.
  Rat  1509 ELTFSLSPDELGTSSIMKIEGKFVNPVQVVLAKHVYEQVLQTMDNLVYSEDLNKFAASAPPSPCP 1573

  Fly   962 DSDMDVLDVIYTPKQENSSNYLFTVSCTIADKSSPEFSTKYNSTEQLVVAN-------------- 1012
            :|.:..|.....|..|...|.||:.| :.:..|....|.|.:.....:.||              
  Rat  1574 NSPLPPLSSCGEPTAEKKENGLFSHS-SFSSASQKSLSVKESKAFTQIQANFCISELQVQLSGDL 1637

  Fly  1013 --------------FEV-----------LQIVLHQECLQRIME---------------------- 1030
                          |||           :||.|....::.::|                      
  Rat  1638 TLGAQGLVSLKFQDFEVEFSKDHPQTLSIQIALRSLLMEDLLEKNPDSKYKSLMVSRGAPKPSSL 1702

  Fly  1031 ----------------------------------VVNNFQRNLDLVL------------------ 1043
                                              |...:||.:....                  
  Rat  1703 AQKEYLSQSCPSVSCVEYPAMPRSLPSHMEEAPNVFQLYQRPISTCRKKQKEVQDKSYPQTPPPS 1767

  Fly  1044 -SSTRPRDRMGSIGGGDGIKRTLNVILEDTEEIMTTDQMKRRKK-------------TRRTHVV- 1093
             |...|:..:|.....|.:.. :|:.|.|.:....:....|..:             |.:|.|| 
  Rat  1768 PSVDEPKVLVGKSKFDDSLVH-INIFLVDKKHPEFSSSYGRINRSIDVDFNCLDVLITLQTWVVI 1831

  Fly  1094 -----------------------ETVKVRVIANLD----------------QVGLVLTGRKRPIA 1119
                                   :.||....|::.                .:.|||:.....:|
  Rat  1832 LDFFGIGSTADNHAMKVPPEGPLQNVKAEATASMQSELQEPVNSKLDLKVHSLSLVLSKATSELA 1896

  Fly  1120 EMNVKKFVSSLIIKSSYTEVNIGLKDIQVLDLNPY-TIHKNILSIVGKDAFNCQIVIYNKEETQD 1183
            :.||.|.|:.:.:......:...:..:.:.||.|: .:::...:..|::|...|...|.:.:...
  Rat  1897 KANVSKLVAHMEMIEGDLALQGSIGSLSLSDLTPHGDLYRERFTTSGEEALIFQTFKYGQPDPLL 1961

  Fly  1184 YNSDDMKITVDIGCMKIIFLNWFVAGVMNFLNNFTAAQATIS-QAGAAAAESARQKAMDAYETAT 1247
            ....|:::::.:..::.:....|.|.|:.|:.:||..|..:. |..|...::.|.:|    :..:
  Rat  1962 QREHDIRVSLQMASVQYVHTQRFQAEVVAFIQHFTQLQDVLGRQRAAVEGQTVRDQA----QRCS 2022

  Fly  1248 RMKLNIRIKAPIIIVPIGSQDRNALLLDLGLLELTNNTV-------------------------- 1286
            |:.|:|...||::::|..|:..|.::.:||.|::.|..:                          
  Rat  2023 RILLDIEAGAPVLLIPESSRSNNLIVANLGKLKVKNKFLFAGFPGTFSLQDKESVPSASPTDTMK 2087

  Fly  1287 -------------------------------------------------------EVAVAEEERL 1296
                                                                   :.:.:.|:.:
  Rat  2088 HSMKKMPSTEDPKGPQVQGLFMMPPAGMGLGSLKSDFVPSASIKQRGQQAVPPISQSSSSPEDHV 2152

  Fly  1297 AVID--EIKLQICDVKISKIVLLDGNESTVDEVDAEVGFLSKF-------NMMNPMSCTLSITRN 1352
            .::|  .:.||..|:..::....:|:::: :....::.|.|.|       .:..|....|.:.||
  Rat  2153 CLLDCIVVDLQDMDIFAAERHPREGSKAS-ESSSGDLIFPSYFVRQTGGSLLTEPCRLKLQVERN 2216

  Fly  1353 LSYTWYRDVPELNLSGRLKSIELTLFADDYALVMLVLNRNLNEGLEEFPPSEEAPQEAQVRP-ER 1416
            |.......|.::::.|.|.|:..:|....|.|:..:|..||.|.:|:|           :|| :.
  Rat  2217 LDKEISHTVADISVHGSLSSVHCSLDLCKYKLIRGLLENNLGEPIEDF-----------MRPYDL 2270

  Fly  1417 RNSRAGRLSRTVQVSPIREKIHESIKFNFQFDGVVINLME---GEGAG-LARFGIYFLSVKGTKL 1477
            ::.|.    .||    :..:::..:.|......|.:.|.:   .||.| ||||......:.....
  Rat  2271 QDPRI----HTV----LSGEVYTCMCFLIDMVNVSLELKDPKGKEGTGSLARFDFKKCKLLYESF 2327

  Fly  1478 DNGTLSTSVVLCNIQMDDMRSNSKSQIRQYLSRKDWVQPKLDTDEIIDACY--------NERNFM 1534
            .|.|.|.::|..::...|.|         |..:|    |......:.:..:        .:.:..
  Rat  2328 SNQTKSINLVSHSMMAFDTR---------YSGQK----PSHGMTNVFNCIFQPSKSSSATQGSIQ 2379

  Fly  1535 VDVTAIIKEDDTFAEVRVRGFDLIVCIDFLLKLTTFLTLPPEENPRESVYIKPA----PVSETAR 1595
            :::.....:|.:...|.:....:.:..|:||.:..||..|.:...:.   :.||    ..||:|.
  Rat  2380 IELHFRSTKDSSCFTVVLNNLRVFLIFDWLLLVHDFLHTPSDVKKQN---VTPARYRNASSESAV 2441

  Fly  1596 DTKHSIRSSAILAAQELVPVESSSHEVPNRKMNLILHIDEPDIILVENLEDLNTSCIIFNAQVHL 1660
            ..| :::|..:.....| ||.:..|      :.:.:::...:.::||::...:|:.||......|
  Rat  2442 VPK-TVKSGVVTKRSSL-PVSNERH------LEVKVNVTGTEFVVVEDVSCFDTNAIILKGTTVL 2498

  Fly  1661 NYRSINDKQIVNGQIDALKMYMCAFLPERREMTRHYILHPCVISLQ----GSTPEEEG------- 1714
            .|:.....:..:|.:..::::.|....|  :.|...|:.|..|.::    .|.....|       
  Rat  2499 TYKPRFVDRPFSGSLFGIEVFSCRLGNE--QDTALSIVDPVQIQVELVGNSSYQNSSGLMDAFNS 2561

  Fly  1715 ------MHISLKLSDIIINVSPATIELL--------------NKAML---SVSSGTMTKCAIAEE 1756
                  :.|.|:..||.::.:...:.|.              :.|.|   ||||.......|.|:
  Rat  2562 EDFPPILEIQLQALDIRLSYNDVQLFLAIAKSIPEQASAAAPDSAALEADSVSSNLPGASRIGED 2626

  Fly  1757 SRNYSN----------------------------LWHQHHFHSRTYWFTKVEQGVDALEAEQRSV 1793
            .|..|.                            |..|........|..|..:.:.:|...  |.
  Rat  2627 VREGSRHTLDPVLELQLARLQELGFSMDDCRKALLVCQGQLKKAASWLFKNAEPLKSLSLV--SS 2689

  Fly  1794 STDNEKQKTEKCVIEIPSITLVIESGVGYYTKPLISLDTRITAVFNNWSR---------SLTAHG 1849
            |.||:...:..   .|..:.:..||....:....:..|..:..:  .:||         :...:.
  Rat  2690 SRDNQGAMSAP---RISGVEVKAESVCICFIDDCMDCDVPLAEL--TFSRLNFLQHIRTNPEGYA 2749

  Fly  1850 SLTLNMNYYNQALAEWEPIIELNEVIGRNGVREYTPWELKFEMGMEKVQSELEDDAEQQAMHMNI 1914
            ..||:.:|||:||:.|||.||              ||......     |.:.........:.:..
  Rat  2750 HFTLSGDYYNRALSGWEPFIE--------------PWPCSVSW-----QQQAASRLHPPRLKLEA 2795

  Fly  1915 HSAETLEITLSKTCLGLLSELAEAFSQAIDQNGLTKPDIVAPYVLEND----------TGFDVN- 1968
            .:...|:|.::              |..|||...||...:|.|..|:.          .|..|: 
  Rat  2796 KAKRRLDINIT--------------SVLIDQYVSTKESWLADYCKEDKETESAKTEDWMGSSVDP 2846

  Fly  1969 --------------------LNLRKGIFTLHEV----------------HRGGTPVGA--NSTLL 1995
                                .||...|:...||                |.|.|...|  .:|..
  Rat  2847 PCFGQSLPLVYLRTRSTASLTNLEHQIYARAEVKTPKRRQPFVPFALRNHTGCTLWFATLTTTPT 2911

  Fly  1996 MVAQSEEVDPSVIKTCTISTGGRAYLQTKDLSTLSE-------------------------EDSE 2035
            ..|.|....|.|     :..|..|:|.  |...:||                         .|..
  Rat  2912 RAALSHSGSPGV-----VPEGNGAFLD--DTHNVSEWREVLTGEEIPFEFEARGKLRHRHTHDLR 2969

  Fly  2036 DYTLYVTIGDINKEIALPVSKSDTRFF-------NLMRST------------------SHEPWGI 2075
            .:.|.|.:....:...:.|.|..| ||       |...||                  |..|..:
  Rat  2970 IHQLQVRVNGWEQVSPVSVDKVGT-FFRYAAPDKNSSSSTIGSPSSRTNIIHPQVYFSSLPPVRV 3033

  Fly  2076 ISEVKQEYGTTKV-NIHGVVSVHNHFTTGLNIYRRNP-APTAQCFEDIFVGRVRPGEVFHVPLH- 2137
            :..|..|....|| .:...:.|.|...|.:.:...:| ||.    :.:.:..:.||:.|.|||| 
  Rat  3034 VFAVTMEGSARKVITVRSALIVKNRLETPMELRLDSPSAPD----KPVVLPAIMPGDSFAVPLHL 3094

  Fly  2138 ---AIYAESKDL--FFSMRGYRRSVQGISW------ASNPSDLNYSHQLHCDPTNTFEPLIMNAR 2191
               .:.|..|.|  ||..       ..|.|      |...|.....|.:..:.:..|...:    
  Rat  3095 TSWRLQARPKGLGVFFCK-------APIHWTNVVKTAEVSSSKRECHSMDTEKSRFFRFCV---- 3148

  Fly  2192 RSKSEVY--------FENTNKYTLLSAFYTIHLRPPLYLRNSLPINIQVSVAGCSVR------KE 2242
            ..|.|.|        |.::.|.......:||:|.|.:.:.|.||..:...|.|..:.      ||
  Rat  3149 AIKKENYPDYMPSNIFSDSAKQIFRQPGHTIYLLPTVVICNLLPCELDFYVKGMPINGTLKPGKE 3213

  Fly  2243 DGLDAQSSQRFVDRGYRKEDFLDYGEKPVNSGDVLHLPTVRLASKGKESKSFLVVRLVQYLEKDW 2307
            ..|....:.:.::.|...|:|....|..:..|...::..:||....:...: |.:|:        
  Rat  3214 AALPTADTSQNIELGVSLENFPLCKELLIPPGTQNYMVRMRLYDISRRQLN-LTIRI-------- 3269

  Fly  2308 SCATEIWDYTDDVITWTFSSYDSEMKVDMDLYVKTENRHGSLMLTLFSPFWMINKTGMMLTYKSE 2372
            :|..|                                  |||.:.:.:|:|:|||||:.|.::.:
  Rat  3270 ACRAE----------------------------------GSLKIFISAPYWLINKTGLPLIFRQD 3300

  Fly  2373 TTSVEVLYHPPEYS-----GPILFTFRDKLFFDKKKASIRIDNG-------QWSEKIPLDVAGSV 2425
            ....:......|:.     .|:||.:.||  ......::||..|       .|.:...||....|
  Rat  3301 NAKTDAAGQFEEHELARSLSPLLFCYADK--EQPNLCTMRIGRGIHPEGMPGWCQGFSLDGGSGV 3363

  Fly  2426 GEVICFANNQK----YPVGVHNHLTQNSL--TKQITFIPFYIVCNKCHFDIEL--------QEQS 2476
            ..:.......:    |.:|:.....:...  |..:.|.|.|::.||....:..        |..:
  Rat  3364 RALKVIQQGNRPGLIYNIGIDVKKGRGRYIDTCMVIFAPRYLLDNKSSHKLAFAQREFARGQGTA 3428

  Fly  2477 RPADPWLHLEPNEMEPLWPRNDTKNNLVVR---VDGKI-TPAFDFTEVICTLLKLEDS--KYGGI 2535
            .|:.....|..:.:...|||||....|.||   |...| :..|:..:.....:.:.|:  |...:
  Rat  3429 NPSGYISTLPGSSVVFHWPRNDYDQLLCVRLMDVPNCIWSGGFEVNKNNSFHINMRDTLGKCFFL 3493

  Fly  2536 NVDVQTTEGGVY-ITFTDYKPADAPGLLINHTGKQIVYHEKGTKNEHILNAKSTIM---YAWDDP 2596
            .|:: |..|..| |:|:|......|..:.|.:...||:.:.|.....:......:|   ||||:|
  Rat  3494 RVEI-TLRGATYRISFSDTDQLPPPFRIDNFSKVPIVFTQHGVAEPRLRTEVKPMMSLHYAWDEP 3557

  Fly  2597 TGPKML---VFGTNKEETDLKRDGIGEVIMQDGGKVLWVSFL--------DGL------------ 2638
            |.|..:   |.|....|.:...:.     .|:..::.:.:|:        .||            
  Rat  3558 TLPPFITLTVKGAGSSEINCNMND-----FQNNRQLYYENFIYIAATYTFSGLQEGKGRPVASHK 3617

  Fly  2639 ---------------QRVLL------------------FTENESIA-----NRTESTASLQ---- 2661
                           |||:|                  ...:|..|     |:..:|.|::    
  Rat  3618 AITCAELVLDVSPKTQRVILKKKEPGKRSQLWRMTGTGMLAHEGSAVPHNPNKPSATRSIEGSAI 3682

  Fly  2662 --------------------------SITQS-------IDLRIHGIGLSVINNETGLDILY---- 2689
                                      |.||:       :...:||:   |:..:.||..|:    
  Rat  3683 LDIAGLAAVTDNRYEPLMLRKPDRRRSTTQTWCFHEGKLTCGLHGL---VVQAKGGLSGLFDGAE 3744

  Fly  2690 --LGVTSS----GIIWESKKVTKNRF-----------------KELTINENALLEIEYQKYLVHK 2731
              ||..||    |.:...::....:.                 :.|.|.:....:.|...|.|.:
  Rat  3745 VVLGPDSSVELLGSVPPEQQFANQKMRPGSGMLSVRVIPDGPTRALQITDFCQRKSERSSYEVEE 3809

  Fly  2732 -SVNDVQTYKLDN-----------KFPIDFDLMILKKTVERNLRRSF------YPAIWLSRKSSP 2778
             .|.:.:..||.|           :......:.::.|..|..:..|.      |..:..|.    
  Rat  3810 LPVTEQELQKLRNPDTHQELEVLVRLEGGIGVSLINKVPEELVFASLTGINIHYTQLATSH---- 3870

  Fly  2779 FQSQLHVKINRIQVDNQFLDPIFPVVL--APIPPPKSVASTTSLKPFIECSMVQRIMPNSTVRQF 2841
               .|.:.|..:|||||.:....|.:|  .|:.....|..|   .|.::.:.|:....::....:
  Rat  3871 ---MLELSIQDVQVDNQLIGTTQPFMLYVTPLSNENEVIET---GPAVQVNAVKFPSKSALTNIY 3929

  Fly  2842 KYARILIQEFLFKVDLNFLTAIAEMFAKEVSDEAAAKQFRQDVESIELPLSAFFEEHSLEEQKSF 2906
            |:..:..|:|..:::...|..:...|..:        |...:||..:..:.....|......:.:
  Rat  3930 KHLMVTAQKFTVQIEEKLLLKLLSFFGYD--------QAESEVEKYDENIHEKTAEQGGTPTRYY 3986

  Fly  2907 YDNLHLGPLKIHVSFSMAGSDTKALPGFLGSLVQGVGVTLTDVNDVVFRLAFFEREYQFFSQKQL 2971
            ::||.:...:|.:|...:..    ||..|.:|...:|..|....|.|..|..|.|.:.:.:::.:
  Rat  3987 FENLKISIPQIKLSVFTSNK----LPLDLKALKSTLGFPLIRFEDAVINLDPFTRVHPYETKEFI 4047

  Fly  2972 INEITSHYTGQALKQLYVLVLGLDVLGNPYGLVVGLKKGVEDLFYEPFQGAIQGPGEFAEGLVL- 3035
            ||:|..|:..:.|.|...::..:|.||||.||:..:.:||                   .||:. 
  Rat  4048 INDILKHFQEELLSQAARILGSVDFLGNPMGLLNDVSEGV-------------------TGLIKY 4093

  Fly  3036 -GVKSLFGHTVGGAAGAVSKITGAMGKGLAALTFDEDYQKKRRQGIQNKPKNFHEGLARSSKGLV 3099
             .|..|..:...|.:.:.:|..|.:..||.. |.|..:|.: |:.|:.......|.|.....||.
  Rat  4094 GNVGGLIRNVTHGVSNSAAKFAGTLSDGLGK-TMDNRHQSE-REYIRYHAATSGEHLVAGIHGLA 4156

  Fly  3100 MGFVDGVTGVVTKPVTGAR-DNGVEGFFKGLGKGAIGLVARPTAGVVDFASGSFEAVKRAADAS- 3162
            .|.:.|:|.|:|..|.|.: :.||.||..|||||.:|.|.:|.||.:||||.:.:||:..|..| 
  Rat  4157 HGIIGGLTSVITSTVEGVKTEGGVSGFISGLGKGLVGTVTKPVAGALDFASETAQAVRDTATLSG 4221

  Fly  3163 --EDVKRMRPPRFQHYDFVLRP-YCLMEATGNKIMKETDKGKFATTDN-----FIHCEEIIQKSE 3219
              ...:|:|.||.......|.| |...:|.|.:.:       |..|||     ||..|.|   ..
  Rat  4222 PRTQAQRVRKPRCCTGPQGLLPRYSESQAEGQEQL-------FKLTDNIQDEFFIAVENI---DS 4276

  Fly  3220 YLVVTNYRVM-------YVQRNEMF 3237
            |.|:.:.:.:       |:.|..:|
  Rat  4277 YCVLISSKAVYFLKSGDYIDREAIF 4301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps13NP_001260781.1 Chorein_N 4..113 CDD:315323 41/108 (38%)
VPS13 140..370 CDD:318996 61/236 (26%)
VPS13_mid_rpt 574..807 CDD:318998 61/295 (21%)
SHR-BD 2349..2600 CDD:310922 65/286 (23%)
VPS13 <2701..3232 CDD:330393 134/586 (23%)
VPS13_C 2904..3074 CDD:318997 41/171 (24%)
Vps13dNP_001382518.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D4159at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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