Sequence 1: | NP_001260781.1 | Gene: | Vps13 / 35693 | FlyBaseID: | FBgn0033194 | Length: | 3321 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_596800.2 | Gene: | vps1302 / 2540138 | PomBaseID: | SPBC16C6.02c | Length: | 3004 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 3580 | Identity: | 748/3580 - (20%) |
---|---|---|---|
Similarity: | 1370/3580 - (38%) | Gaps: | 886/3580 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 VFEAVVADVLNKVLGDYIENLDRNQLKIGIWGGDVVLQNLKIRENALDELDLPVQLIYGYLGKLV 66
Fly 67 LKIPWKNLYSQPVIVNIEDLYVLVSPNNNVQYNAEKEAKYEMDLKKAALDALEAAR--KKELEMD 129
Fly 130 QPKADAGFAEKLTAQIVNNLQVQITNVHLRYED---TTTTGSPFSFGISLHELELYTTDCDWEKC 191
Fly 192 YMAQQASQVFKIANLSCLSAY----LNCGGQLYANNKSDLSQQFKTNIACKETKPNYNYVLGPIS 252
Fly 253 CNAKLKLNMNPELDDPPFEKPKIDLTLEMEKLNVGLTNTQFDNLMKLGDAMNRQQLGIPYRKYRP 317
Fly 318 YNI----PYKGHARDWWHFAITSILEEEVRKPRESWTWGHIKTHRERCNTYAQKYKEQCLSKKPS 378
Fly 379 AVLTETCRLLETELDVFNLLLIRQRVNIEIAKQR-EAVPEQKSGWFSGWGWGGGAKKDDQTTSQK 442
Fly 443 LVEKFEAAMTSEEKEKMYRAIGYQ----ENAKPTDLPESYEAIRMNFKLIALEVGLYKDERNSSA 503
Fly 504 ATKDFHELPSLVLLNFSMATALITQ-RPAAEAISIIAGMREIKVTGLTRNDYTPLLVESK--ITD 565
Fly 566 EFNLLEVFFETNPLDKLCDQRVKVVARPLQITYDAPTILALINAFQTP--GDVTLSKFEDAASTK 628
Fly 629 ISNFKERSATGMQYMIDKKAVLDVDILLMPNILVVPHKGVYDAGNVS--LLVVSMGQVHLSSQ-- 689
Fly 690 ------PRRESNKLQHLFSAGEDKDEILKTVMENAYDRFTVAVDDVQMLVVRAGEPWQNALAEAN 748
Fly 749 --STEMHVLRPVSLKVTAALCVVDNDPRLPNIKVDIDLPAILVNVSEDRIFLAIKVATSIP---- 807
Fly 808 ----------LPEQKEPAS------RLTQTNSRSSMSISNFINKEVKKIGPSASGSSASKDPLLD 856
Fly 857 EIIQYTSLDVNFSLGEINFVLFQSSRKCETSPDVSIEFLT--------PD-------------GD 900
Fly 901 VLPSQLTENIQEPIEELPP-------TPPQQILSIDIRRLEAHFVSKTYESVATVKL----GDIN 954
Fly 955 LRQYDCQDSDMDVLDVI--YTPKQENSSNYLFTVSCTIADKSSPEFSTKYNSTEQLVVANFEVLQ 1017
Fly 1018 IVLHQECLQRIMEVVNNFQRN--------LDLVLSSTRPRDRMGSIGGGDGIKRTLNVILEDTEE 1074
Fly 1075 IMTTDQMKRRKKTRRTHVVETVKVRVIANLDQVGLVLTGRKRPIAEMNVKK----FVSSLIIKSS 1135
Fly 1136 YTEVNIGLKDIQVLDLNPYTIHKNILSIVGKDAFNCQIVIYNKEETQDYNSDDMKITVDIGCMKI 1200
Fly 1201 IFLNWFVAGVMNFLNNFTAAQATISQAGAAAAESARQKAMDAYETATRMKLNIRIKAPIIIVPIG 1265
Fly 1266 SQDRNALLLDL-----------GLLELTNN---------TVEVAVAEEER---LAVIDEIKLQIC 1307
Fly 1308 DVKISKIVLLDGNESTVDEVDAEVGFLSKFNMMNPMSCTLS-ITRNLSYTWYRDVPELNLSGRLK 1371
Fly 1372 SIELTLFADDYALVMLVLNRNLNEGL---EEFPPSEEAPQEAQVRPERRNSRAGRLSRTVQ--VS 1431
Fly 1432 PIREKIHESIKFNFQFDGVVINLMEG-------EGAGLARFGIYFLSVKGT-KLDNGTLSTSVVL 1488
Fly 1489 CNIQMDDMRSNSKSQIRQYLSRKDWVQPKLDTDEIIDACYNERNFMVDVTAIIKEDDTFAEVRVR 1553
Fly 1554 GFDLIVCIDFLLKLTTFLTLPPEENPRESVYIKPAPVSETARDTKHSIRSSAILAAQELVPVESS 1618
Fly 1619 SHEVPNRKMNLILHID--EPDIILVENLEDLNTSCIIFNAQVHLNYRSINDKQIVNGQIDALKMY 1681
Fly 1682 MCAFLPERREM--TRHYILHPCV---------ISLQGSTPEEEGMHISLKLSDIIINVSPATIEL 1735
Fly 1736 LN---KAMLSVSSGTMTKCAIAEESRNYSNLWHQHHFHSRTYWFTKVEQGVDALEAEQRSVS--- 1794
Fly 1795 -TDNEKQKTEKCVIEIPSITLVIESGVGYYTKPLISLD-TRITAVFNNWSRSLTAHGSLTLNMNY 1857
Fly 1858 YNQALAEWEPIIELNEVIGRNGVREYTPWELKFEMGMEKVQSELEDDAEQQAMH-MNIHSAETLE 1921
Fly 1922 ITLSKTCLGLLSELAEAFSQAIDQNGLTKPDIVAPYVLENDTGFDVNLNLRKGIFTLHEVHRGGT 1986
Fly 1987 PVG-------ANSTLLMVAQSEEVDPSVIKTCTISTGGRAYLQTKDLSTLSEEDSEDYTLYVTIG 2044
Fly 2045 DINKEIALPVSKSDTRFF----------NLMRSTSHEPWGIISEVKQEYGTTKVNIHGVVSVHNH 2099
Fly 2100 FTTGLNIYRRNPAPTAQCFEDIFVGRVRPGEVFHVPLHAIYAESKDL--FFSMR-------GYRR 2155
Fly 2156 SVQGISWAS-NPSDLNYSHQLHCDPTNTF--EPLIMNARRSKSEVYFENTNKYTLLSAFYTIHLR 2217
Fly 2218 PPLYLRNSLPINIQVSVAGCSVRKEDGLDAQSSQRFVDRGYRKEDFLDYGEKPVNSGDVLHLPTV 2282
Fly 2283 RLASKGKESKSFLVVRLVQYLEKDWSCATEIWDYT-----DDVITWTFSSYDSEMKVDMDLYVKT 2342
Fly 2343 ENRHGSLMLT---LFSPFWMINKTGMMLTYKSETTSVEVLYHPP--EYSG---PILFTFRDKLFF 2399
Fly 2400 DKKKASIRIDNG-QWSEKIPLDVAGSVGEVICFANNQKYPVGVHNHLTQNS----LTKQITFIPF 2459
Fly 2460 YIVCNKCHFDIELQEQSRPADPWLHLEPNEMEPLW----PRN-------DTKNN------LVVRV 2507
Fly 2508 DGKITPAFDFTE----VICTLLK----LEDSKYGGINVDVQTTEGGVYITFTDYKPADAPGLLIN 2564
Fly 2565 HTGKQIVYHEK-------------GTKN-EHILNAKSTIMYAWDDP-TGPKMLVFGTNKEETDLK 2614
Fly 2615 RDGIGE------------VIMQDGGKVLWVSFLDGLQRVLLFTE----NESIANRTESTASLQSI 2663
Fly 2664 TQ--SIDLRIHGIGLSVINNETGLDILYLGVTSSGIIWESKKVTKNRFKELTINENALLEIEYQK 2726
Fly 2727 YLVHKSVNDVQTYKLDNKFPIDFDLMILKKTVERNLRRSFYPAIWLSRKSSPFQSQLHVKINRIQ 2791
Fly 2792 VDNQFLDPIFPVVLAPIPPPKSVASTTSLKPFIECSMVQ---RIMPNST--VRQFKYARILIQEF 2851
Fly 2852 LFKVDLNFLTAIAEMF--AKEVSDEAAAKQFRQDVESIELP-LSAFFEEHSLEEQKSFYDNLHLG 2913
Fly 2914 PLKIHVSFSMA-GSDTKALPGFLGSLVQGVGV---TLTDVNDVVFRLAFFEREYQFFSQKQLINE 2974
Fly 2975 ITSHYTGQALKQLYVLVLGLDVLGNPYGLVVGLKKGVEDLFYEPFQG-AIQGPGEFAEGLVLGVK 3038
Fly 3039 SLFGHTVGGAAGAVSKITGAMGKGLAALTFDEDYQKKRRQ-GIQNKPK-----------NFHEGL 3091
Fly 3092 ARSSKGLVMGFVDGVTGVVTKPVTGARDNGVEGFFKGLGKGAIGLVARPTAGVVDFASGSFEAVK 3156
Fly 3157 RAAD--ASEDVKRMRPPRFQHYDFVLRPYCLMEATGNKIMKETDKGKFATTDNFIHCEEIIQKSE 3219
Fly 3220 YLVVTNYRVMYVQRNEMFGVWTSLWSYLWNEISSVAATARGVQFTVKTDGKKVLGLFSSKESPRK 3284
Fly 3285 LVLVA 3289 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13 | NP_001260781.1 | Chorein_N | 4..113 | CDD:315323 | 43/108 (40%) |
VPS13 | 140..370 | CDD:318996 | 47/240 (20%) | ||
VPS13_mid_rpt | 574..807 | CDD:318998 | 50/246 (20%) | ||
SHR-BD | 2349..2600 | CDD:310922 | 72/303 (24%) | ||
VPS13 | <2701..3232 | CDD:330393 | 133/557 (24%) | ||
VPS13_C | 2904..3074 | CDD:318997 | 58/174 (33%) | ||
vps1302 | NP_596800.2 | MRS6 | 1..>1997 | CDD:227376 | 489/2427 (20%) |
Chorein_N | 3..112 | CDD:289396 | 43/108 (40%) | ||
VPS13 | 139..365 | CDD:293513 | 47/240 (20%) | ||
VPS13_mid_rpt | 559..764 | CDD:293515 | 46/231 (20%) | ||
SHR-BD | 2085..2363 | CDD:284143 | 72/297 (24%) | ||
VPS13_C | 2601..2775 | CDD:293514 | 57/173 (33%) | ||
ATG_C | 2793..2862 | CDD:286423 | 21/80 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 97 | 1.000 | Domainoid score | I1886 |
eggNOG | 1 | 0.900 | - | - | E1_COG5043 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 490 | 1.000 | Inparanoid score | I253 |
OMA | 1 | 1.010 | - | - | QHG54975 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001282 | |
OrthoInspector | 1 | 1.000 | - | - | otm47250 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101020 | |
Panther | 1 | 1.100 | - | - | O | PTHR16166 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 1 | 1.000 | - | - | X990 | |
TreeFam | 1 | 0.960 | - | - | ||
12 | 11.860 |