Sequence 1: | NP_001260781.1 | Gene: | Vps13 / 35693 | FlyBaseID: | FBgn0033194 | Length: | 3321 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_150648.2 | Gene: | VPS13A / 23230 | HGNCID: | 1908 | Length: | 3174 | Species: | Homo sapiens |
Alignment Length: | 3475 | Identity: | 1037/3475 - (29%) |
---|---|---|---|
Similarity: | 1728/3475 - (49%) | Gaps: | 468/3475 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MVFEAVVADVLNKVLGDYIENLDRNQLKIGIWGGDVVLQNLKIRENALDELDLPVQLIYGYLGKL 65
Fly 66 VLKIPWKNLYSQPVIVNIEDLYVLVSPNNNVQYNAEKEAKYEMDLKKAALDALEAARKKELEMDQ 130
Fly 131 --PKADAGFAEKLTAQIVNNLQVQITNVHLRYE-DTTTTGSPFSFGISLHELELYTTDCDWEKCY 192
Fly 193 MAQQASQVFKIANLSCLSAYLNCGGQL-----YANNKSDLSQQFKTNIACKETKP-NYNYVLGPI 251
Fly 252 SCNAKLKLNMNPELDDPPFEKPKIDLTLEMEKLNVGLTNTQFDNLMKLGDAMNRQQLGIPYRKYR 316
Fly 317 PYNIPYKGHARDWWHFAITSILEEEVRKPRESWTWGHIKTHRERCNTYAQKYKEQCLSKKPSAVL 381
Fly 382 TETCRLLETELDVFNLLLIRQRVNIEIAK-----QREAV--PEQKSGWFSG-WGWGGGAKKDDQT 438
Fly 439 TSQKLVEKFEAAMTSEEKEKMYRAIGYQENAKPTDLPESYEAIRMNFKLIALEVGLYKDERNSSA 503
Fly 504 ATKDFHELPSLVLLNFSMATALITQRPAAEAISIIAGMREIKVTGLTRNDYTPLLVESKITDEFN 568
Fly 569 LLEVFFETNPLDKLCDQRVKVVARPLQITYDAPTILALINAFQTPGDVTLSKFEDAASTKISNFK 633
Fly 634 ERSATGMQYMIDKKAVLDVDILLMPNILVVPHKGVYDAGNVSLLVVSMGQVHLSSQPRRESNKLQ 698
Fly 699 HLFSAGEDKDEILKTVMENAYDRFTVAVDDVQMLVVRAGEPWQNALAEANSTEMHVLRPVSLKVT 763
Fly 764 AALCVVDNDPRLPNIKVDIDLPAILVNVSEDRIFLAIKVATSIPLPEQKEPASRLT------QTN 822
Fly 823 SRSSMSISNFINKEVKKIG-PSASGSSASKD-------PLLDEI-------------IQYTSLDV 866
Fly 867 NFSLGEINFVLFQSSRKCETSPDVSIEFLTPDGDVLPSQLTENIQEPIEELPPTPPQQILSIDIR 931
Fly 932 RLEAHFVSKTYESVATVKLGDINLRQYDCQDSDMDVLDVIYTPKQENSSNYLFTVSCTIADKSSP 996
Fly 997 EFSTKYNSTEQLVVANFEVLQIVLHQECLQRIMEVVNNF---QRNLDLVLSSTRPRDRMGSIGGG 1058
Fly 1059 DGIKRTLNVILEDTEEIMTTDQMKRRKKTRRTHVVETVKVRVIANLDQVGLVLTGRKRPIAEMNV 1123
Fly 1124 KKFVSSLIIKSSYTEVNIGLKDIQVLDLNPYTIHKNILSIVGKDAFNCQIVIYNKEET----QDY 1184
Fly 1185 NSDDMKITVDIGCMKIIFLNWFVAGVMNFLNNFTAAQATISQAGAAAAESARQKAMDAYETATRM 1249
Fly 1250 KLNIRIKAPIIIVPIGSQDRNALLLDLGLLELTNNTVEVAVAEEERLAVIDEIKLQICDVKI--S 1312
Fly 1313 KIVLLDGNESTVDEVDAEVGFLSKFNMMNPMSCTLSITRNLSYTWYRDVPELNLSGRLKSIELTL 1377
Fly 1378 FADDYALVMLVLNRNL---NEGLEEFPPSEEAPQEAQVRPERRNSRAGRLSRTVQVSPIREKIHE 1439
Fly 1440 -------SIKFNFQFDGVVINLMEGEGAGLARFGIY---FLSVKGTKLDN----------GTLST 1484
Fly 1485 SVVLCNIQMDDMRSNSKSQIRQYL------SRKDWVQPKLDTDEIIDACYNERNFMVDVTAIIKE 1543
Fly 1544 DDTFAEVRVRGFDLIVC--IDFLLKLTTFLTLPPEENPRESVYIKPAPVSETARDTKHSIRSSAI 1606
Fly 1607 LAAQELVPVESSSHEVPNRKMNLILHIDEPDIILVENLEDLNTSCIIFNAQVHLNYRSINDKQIV 1671
Fly 1672 NGQIDALKMYMCAFLPERREMTRHYILHPCVISLQ----GSTPEEEGMHI---SLKLSDIIINVS 1729
Fly 1730 PATIELLNKAMLSVSSGT-MTKCAIAEE-SRNYSNLWHQHHFHSRTYWFTKVEQGVDALEAEQRS 1792
Fly 1793 VSTDNEKQKTEKCVIEIPSITLVIESGVGYYTKPLISLDTRITAVFNNWSRSLTAHGSLTLNMNY 1857
Fly 1858 YNQALAEWEPIIELNEVIGRNGVREYTPWELKFEMGMEKVQSELEDDAEQQAMH-------MNIH 1915
Fly 1916 SAETLEITLSKTCLGLLSELAEAFSQAIDQNGLTKPDIVAPYVLENDTGFDVNLNLRKGIFTLHE 1980
Fly 1981 VHRGGTPVGANSTLLMVAQSEEVDPSVIKTCTISTGGRAYLQTKD------LSTLSEEDSEDYTL 2039
Fly 2040 YVTIGDINKEIA--LPVSKSDTRFFNLMRSTSHEPWGIISEVKQEYGTTKVNIHGVVSVHNHFTT 2102
Fly 2103 GLNIYRRNPAPTAQCFEDIFVGRVRPGEVFHVPLHAIYAESKDLFFSMRGYRRSVQGISWASNPS 2167
Fly 2168 DLNYSHQLHCDPTNTFEPLIMN----------ARRSKSEVYFEN----TNKYTLLSAF------- 2211
Fly 2212 -YTIHLRPPLYLRNSLPINIQVSVAGCSVRKEDGLDAQSSQRFVDRGYRKEDFLDYGEKPVNSGD 2275
Fly 2276 VLHLPTVRLASKGKESKSFLVVRLVQYLEKDWSCATEIWDYTDDVITWTFSSYDSEMKVDMDLYV 2340
Fly 2341 KTENRHGSLMLTLFSPFWMINKTGMMLTYKSETTSVEVLYHPPEYSGPILFTFRDKLFFDKKKAS 2405
Fly 2406 IRIDNGQWSEKIPLDVAGSVGEVICFANNQKYPVGVHNHLTQNSLTKQITFIPFYIVCNKCHFDI 2470
Fly 2471 ELQEQSRPADPWLHLEPNEMEPLWPRNDTKNNLVVRVDGKITPA----FDFTEVICTLLKLEDSK 2531
Fly 2532 YGGINVDVQTTEGGVYITFTDYKPADAPGLLINHTGKQIVYHEKGTKN--EHILNAKSTIMYAWD 2594
Fly 2595 DPTGPKMLVFGTNKEETDLKRDGIGEVIMQD--------GGKVLW-VSFLDGLQRVLLFTENESI 2650
Fly 2651 ANRTESTASLQSITQSIDLRIHGIGLSVINNETGLDILYLGVTSSGIIWESKKVTKNRFKELTIN 2715
Fly 2716 ENALLEIEYQKYLVHKSVNDVQTYKLDNKFPI-----DFDLMILKKTVERNLRRSFYPAIWLSRK 2775
Fly 2776 SSPFQSQLHVKINRIQVDNQFLDPIFPVVLAPIPPPKSVASTTSLKPFIECSMVQRIMPNSTVRQ 2840
Fly 2841 FKYARILIQEFLFKVDLNFLTAIAEMFAK-EVSDEAAAKQFRQDVESIELPLSAFFEEHSL---- 2900
Fly 2901 -EEQKSFYDNLHLGPLKIHVSFSMA-----GSDTKALPGF-----LGSLVQGVGVTLTDVNDVVF 2954
Fly 2955 RLAFFEREYQFFSQKQLINEITSHYTGQALKQLYVLVLGLDVLGNPYGLVVGLKKGVEDLFYEPF 3019
Fly 3020 QGAIQGPGEFAEGLVLGVKSLFGHTVGGAAGAVSKITGAMGKGLAALTFDEDYQKKRRQGIQNKP 3084
Fly 3085 KNFHEGLARSSKGLVMGFVDGVTGVVTKPVTGARDNGVEGFFKGLGKGAIGLVARPTAGVVDFAS 3149
Fly 3150 GSFEAVKRAADASEDVKRMRPPRFQHYDFVLRPYCLMEATGNKIMKETDKGKFATTDNFIHCEEI 3214
Fly 3215 IQKSEYLVVTNYRVMYVQRNEMFGVWTSLWSYLWNEISSVAATARGVQFTVKTDGKKVLGLFSSK 3279
Fly 3280 ESPRKLVLVADERKRDALVDIIESQRSDPN 3309 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13 | NP_001260781.1 | Chorein_N | 4..113 | CDD:315323 | 55/108 (51%) |
VPS13 | 140..370 | CDD:318996 | 87/236 (37%) | ||
VPS13_mid_rpt | 574..807 | CDD:318998 | 74/232 (32%) | ||
SHR-BD | 2349..2600 | CDD:310922 | 87/256 (34%) | ||
VPS13 | <2701..3232 | CDD:330393 | 238/551 (43%) | ||
VPS13_C | 2904..3074 | CDD:318997 | 98/179 (55%) | ||
VPS13A | NP_150648.2 | MRS6 | 4..>2104 | CDD:227376 | 629/2338 (27%) |
Chorein_N | 4..113 | CDD:289396 | 55/108 (51%) | ||
VPS13 | 142..371 | CDD:293513 | 87/236 (37%) | ||
TPR 1 | 212..245 | 11/36 (31%) | |||
TPR 2 | 373..406 | 14/32 (44%) | |||
TPR 3 | 537..575 | 13/38 (34%) | |||
VPS13_mid_rpt | 570..793 | CDD:293515 | 73/231 (32%) | ||
FFAT. /evidence=ECO:0000269|PubMed:30741634 | 842..848 | 0/5 (0%) | |||
VPS13_mid_rpt | 1156..>1266 | CDD:293515 | 30/109 (28%) | ||
TPR 4 | 1256..1289 | 7/46 (15%) | |||
TPR 5 | 1291..1320 | 10/28 (36%) | |||
TPR 6 | 2009..2041 | 10/60 (17%) | |||
SHR-BD | 2209..2452 | CDD:284143 | 84/250 (34%) | ||
TPR 7 | 2568..2601 | 7/33 (21%) | |||
Required for mitochondrial localization. /evidence=ECO:0000269|PubMed:30741634 | 2615..3174 | 241/572 (42%) | |||
VPS13_C | 2766..2943 | CDD:293514 | 97/176 (55%) | ||
ATG_C | 2946..3025 | CDD:286423 | 42/78 (54%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165149787 | |
Domainoid | 1 | 1.000 | 215 | 1.000 | Domainoid score | I2708 |
eggNOG | 1 | 0.900 | - | - | E1_COG5043 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H22068 | |
Inparanoid | 1 | 1.050 | 1468 | 1.000 | Inparanoid score | I109 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG54975 | |
OrthoDB | 1 | 1.010 | - | - | D4159at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001282 | |
OrthoInspector | 1 | 1.000 | - | - | otm41329 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101020 | |
Panther | 1 | 1.100 | - | - | O | PTHR16166 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 1 | 1.000 | - | - | X990 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
16 | 15.800 |