DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps13 and Vps13d

DIOPT Version :9

Sequence 1:NP_001260781.1 Gene:Vps13 / 35693 FlyBaseID:FBgn0033194 Length:3321 Species:Drosophila melanogaster
Sequence 2:NP_001263431.1 Gene:Vps13d / 230895 MGIID:2448530 Length:4390 Species:Mus musculus


Alignment Length:4586 Identity:832/4586 - (18%)
Similarity:1466/4586 - (31%) Gaps:1635/4586 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VFEAVVADVLNKVLGDYIENLDRNQLKIGIWGGDVVLQNLKIRENALDELDLPVQLIYGYLGKLV 66
            :.|.:||.|||..||.|:.||:.:||.:.:..|.|.|:||.::::||.||:||.::..|.:||:.
Mouse     1 MLEGLVAWVLNTYLGKYVNNLNTDQLSVALLKGAVELENLPLKKDALKELELPFEVKAGLIGKVT 65

  Fly    67 LKIPWKNLYSQPVIVNIEDLYVLVSPNNNVQYNAEKEAKYEMDLKKAALDALEAARKKELEMDQP 131
            |:||:...:..|.:::|..|:|:..|.....:|.|||...|.:.|||.|.|||...|.|..  |.
Mouse    66 LQIPFYRPHVDPWVISISGLHVIGGPEKIQDFNDEKEKLLERERKKALLQALEERWKSERR--QQ 128

  Fly   132 KADA---GFAEKLTAQIVNNLQVQITNVHLRYEDTTTTGS-PFSFGISLHELELYTTDCDWEKCY 192
            |.:.   .....:..:||.|::::|.:||||:||..|..| ||:|||.:..:.:.....:..:..
Mouse   129 KGEPYWYSVTASVVTRIVENIELKIQDVHLRFEDGVTNPSRPFAFGICIKNVSMQNAANEPVQKL 193

  Fly   193 MAQQASQVFKIANLSCLSAY--LNCGGQLYANNKSDLSQ-QFKTNIACKETKPNYNYVLGPISCN 254
            |.::...|.:      .|.|  :||      ....||.| :.:..:|......:::|:|.|:..:
Mouse   194 MRKKRLDVAE------FSIYWDVNC------TLLGDLPQAELQEAMARSMESRSHHYILEPVCAS 246

  Fly   255 AKLKLNMNPELDDPPF---EKPKIDLTLEMEKLNVGLTNTQFDNLMKLGDAMNRQQLGIPYRKYR 316
            |.||.|.:.|    |.   ..|:|:..:::|.:.:.|:..|:..:|.....:.|::..:.:||::
Mouse   247 ALLKRNCSKE----PLRSRHSPRIECDIQLETIPLKLSQLQYRQIMAFLKELERKERQLKFRKWK 307

  Fly   317 PYNIPYKGHARDWWHFAITSILEEEVRKPRESWTWGHIKTHRERCNTYAQKYKEQCLSKKPSAVL 381
            | .:....:.|:||:||:.:.| .|:|:.|:.|||..: .||.|...:   |.::..:|....||
Mouse   308 P-KVAVSKNCREWWYFALNANL-YEIREQRKCWTWDFL-LHRARDAVF---YTDRYFNKLKGGVL 366

  Fly   382 T-----ETCRLLETELDVFNLLLIRQRVNIEIAKQREAV-----------------PEQKSG--- 421
            :     |.|| :|.|.....|.::|:.|:....||.|..                 |:...|   
Mouse   367 SADDKEEMCR-IEEEQSFEELKILRELVHDRFYKQEELAESLREPQFDSPGTSPGDPDGSGGSGM 430

  Fly   422 ------WFSGW-GWGGGAKKDDQTTSQKLVEKFEAAMTSEEKEKM--YRAIGYQENAKPTD---- 473
                  ||.|| ||.|     .|:...|:||    .:|:|..|..  ...:|.:|...||.    
Mouse   431 LQYLQSWFPGWGGWYG-----QQSPEGKVVE----GLTAESHEHWTPEEILGTEEFFDPTADASC 486

  Fly   474 ----LPESYEAIRMNFKLIALEVGLYKDERNSSAATKDFHELPSLVLLNFSMATALITQRPAAEA 534
                ....:...::|.:|....|.|...|:.::.|.:.     :.:.|.||....|....|...:
Mouse   487 MNTYTKRDHVFAKLNVQLQRGTVTLLHKEQGTAHANES-----AFMQLEFSDVKLLAESLPRRNS 546

  Fly   535 ISIIAGMREIKVTGL------TRNDYTPLLV-------ESKITDEFNL----------------- 569
            ..::     :::.||      |.....||||       ..:::..|.|                 
Mouse   547 SLLL-----VRLGGLFLRDLATEGTMFPLLVFPNPQKEVGRVSQSFGLQTASEDRSDQYSAADPD 606

  Fly   570 ---LEVFFETNPLDKLCDQRVKVVARPLQITYDAPTILALINAFQTPGDVTLSKF---------- 621
               .|:.:|.||:....::|:.|..|||.|.|: |..:..:..|...|.|..|.|          
Mouse   607 NPVFEMLYERNPVHSHFERRLHVSTRPLNIIYN-PQAIKKVADFFYKGKVHTSGFGYQSELELRV 670

  Fly   622 EDAASTKISNFKERSATGMQYMIDKKAVLD-----------VDILLMPNILVVPHKGVYDAGNVS 675
            .:||..:....|.::...::..:|:..|.|           :|| ..|.: :.|....:.  |..
Mouse   671 AEAARRQYDKLKVQTKAEIRQTLDRLLVGDFIEESKRWTVRLDI-SAPQV-IFPDDFTFK--NPV 731

  Fly   676 LLVVSMGQVHLSS---QPRRESN----KLQHLFSAGEDKD------------------------- 708
            |:||.:|::.|::   ..||:|.    ..::.||..|.|.                         
Mouse   732 LVVVDLGRMLLTNTQEDSRRKSGDGSASEENQFSDDEYKTPLATPPSTPPPETSSSNGEKTPPFS 796

  Fly   709 -----------EILKTVMENAYDRFTVAVDDVQMLVVRAGEPWQNALAEANSTEMHVLRP--VSL 760
                       .::.|.|   |:|:::...|:|::|.|..:.|:. :.:.:....||:..  |.|
Mouse   797 GVEFSEEQLQAHLMSTQM---YERYSLTFMDLQVMVGRVRDNWKR-VQDIDVGPTHVVEKFNVHL 857

  Fly   761 KVTAALCVVDNDPRLPNIKVDIDLPAILVNVSEDRIFLAIKVATSIPLPEQK------------- 812
            ::...| :..:||:.|...:..:||.:.::::||:|.........:..||.|             
Mouse   858 QLERRL-IYTSDPKYPGAVLSGNLPDLKIHINEDKISALKNCFALLTTPETKPSDTQIREKIFPQ 921

  Fly   813 --------EPASRLTQT------------------------------------------------ 821
                    :....|||:                                                
Mouse   922 EGPRGSLQDSVMNLTQSIVMLEQHTREVLVESQLLLAEFKVNCMQLGVESSGRYISVLKVFGTNA 986

  Fly   822 ----------------------------------------------------------------- 821
                                                                             
Mouse   987 HFVKRPYDAEVSLTVHGLLLVDTMQTYGADFDLLMASHKNLSFDIPTGSLRDSRAQSPVSGPNVA 1051

  Fly   822 --------NSRSSMSIS-----------------NFINKE------------------------- 836
                    |.:|:.|:|                 .|::.|                         
Mouse  1052 FQTDVTTLNDQSATSVSLEKILTKEQESLIKLEYQFVSSECPSMNLDSTLQVISLQVNNLDIILN 1116

  Fly   837 ----VKKIGPSASGSSASKD-----PLLDEI---------IQYT--------------------- 862
                |:.||.........||     ||:.::         ||.|                     
Mouse  1117 PETIVELIGFLQKSFPKEKDDVSPQPLMTDLERSIVEQGTIQSTYEQNTEVAVEIHRLNLLLLRT 1181

  Fly   863 -----------------------------SLDVNFSLG--------------------------- 871
                                         |.|:|.|||                           
Mouse  1182 VGMADGERHGRKIATASIGGTKVNVSMGSSFDMNGSLGCLQLMDLTQENVKSQYVVSIGNSVGYE 1246

  Fly   872 ---------EINFVLFQ---------------SSRKC---------------------------- 884
                     |..||..:               |.::|                            
Mouse  1247 NIVSDIGYFESVFVRMEDAALTEALSFTFAEKSKQECFLNLKMASLHYNHSAKFLKELTLSMDEL 1311

  Fly   885 ------------------------ETSPDVSIEFLTPD--------------GDVLPSQ------ 905
                                    |.|..||: |.||.              |..|||.      
Mouse  1312 EENFRSMLKSAATKVTTVLATKTAEYSEMVSL-FETPKKTREPFVLEENEIYGFGLPSPRSDTVK 1375

  Fly   906 --LTENIQEPIEELP--PTPPQQI-----------------------LSIDIRRL---------- 933
              |..||:.|:..:|  |..|:.:                       |.::|:.:          
Mouse  1376 LILNINIESPVVSIPRRPGSPELLVGHLGQIFIQNFVAGDDDSRSDRLQVEIKDIKLYSLNCTQL 1440

  Fly   934 ---------------------------EAHFV--------------------------------- 938
                                       ||||.                                 
Mouse  1441 AGRDNAGPEVNRTFCPPSGLASVNSQEEAHFTRHDFFESLHRGQAFHILNNTTIQFKLEKIPIER 1505

  Fly   939 -SKTYESVATVKLGDINLRQYD------------------------------------------- 959
             |:...|::..:||..::.:.:                                           
Mouse  1506 ESELTFSLSPDELGTSSIMKIEGKFVNPVQVVLAKHVYEQVLQTMDNLVYSEDLNKFAASAPTSP 1570

  Fly   960 CQDSDMDVLDVIYTPKQENSSNYLFTVSCTIADKSSPEFSTKYNSTEQLVVAN------------ 1012
            |.:|.:..|.....|..|...|.||:.| :.:..|....|.|.......:.||            
Mouse  1571 CPNSPLPQLSSCGEPCVEKKENGLFSHS-SFSSTSQKSLSVKEAKAFTQIQANFCISELQVQLSG 1634

  Fly  1013 ----------------FEV-----------LQIVLHQECLQRIME-------------------- 1030
                            |||           :||.|....::.::|                    
Mouse  1635 DLTLGAQGLVSLKFQDFEVEFSKDHPQTLSIQIALRSLLMEDLLEKNPDSKYKSLMVSRGAPKPS 1699

  Fly  1031 ------------------------------------VVNNFQRNLDLVL---------------- 1043
                                                |...:||.:....                
Mouse  1700 SLAQKEYLSQSCPSVSSVEYPDMPRSLPSHMEEAPNVFQLYQRPISTCRKKPKEAQDKSYPQTPP 1764

  Fly  1044 ---SSTRPRDRMGSIGGGDGIKRTLNVILEDTEEIMTTDQMKRRKK-------------TRRTHV 1092
               |...|...:|.....|.:.. :|:.|.|.:....:....|..:             |.:|.|
Mouse  1765 PSPSVDEPNMLVGKSKFDDSLVH-INIFLVDKKHPEFSSSYGRINRSIDVDFNCLDVLITLQTWV 1828

  Fly  1093 V------------------------ETVKVRVIANLD----------------QVGLVLTGRKRP 1117
            |                        :.||....|:::                .:.|||:.....
Mouse  1829 VILDFFGIGSTADNHAMKVPPEGLLQNVKAESSASMESEHQEPVNSKLDLKVHSLSLVLSKATSE 1893

  Fly  1118 IAEMNVKKFVSSLIIKSSYTEVNIGLKDIQVLDLNPY-TIHKNILSIVGKDAFNCQIVIYNKEET 1181
            :|:.||.|.::.:.:......:...:..:.:.||.|: ..::...:..|::|...|...|.:.:.
Mouse  1894 LAKANVSKLMAHMEMIEGDLALQGSIGSLSLSDLTPHGDFYRERFTTSGEEALIFQTFKYGQPDP 1958

  Fly  1182 QDYNSDDMKITVDIGCMKIIFLNWFVAGVMNFLNNFTAAQATIS-QAGAAAAESARQKAMDAYET 1245
            ......|:::::.:..::.:....|.|.|:.|:.:||..|..:. |..|...::.|.:|    :.
Mouse  1959 LLQREHDIRVSLQMASVQYVHTQRFQAEVVAFIQHFTQLQDILGRQRAAIEGQTVRDQA----QR 2019

  Fly  1246 ATRMKLNIRIKAPIIIVPIGSQDRNALLLDLGLLELTNNTV------------------------ 1286
            .:|:.|:|...||::::|..|:..|.::.:||.|::.|..:                        
Mouse  2020 CSRILLDIEAGAPVLLIPESSRSNNLIVANLGKLKVKNKFLFAGFPGTFSLQDKESVPSASPAGT 2084

  Fly  1287 ---------------------------------------------------------EVAVAEEE 1294
                                                                     :.:.:.|:
Mouse  2085 PKHSMRKMTTTEDPKGPQVQGLFMMPPAGVGLGSLKSDFVPSASIKQRGQQAVPPVSQSSSSPED 2149

  Fly  1295 RLAVID--EIKLQICDVKISKIVLLDGNESTVDEVDAEVGFLSKF-------NMMNPMSCTLSIT 1350
            .:.::|  .:.||..|:..::....:|:::: :....::.|.|.|       .:..|....|.:.
Mouse  2150 HVCLLDCIVVDLQDMDIFAAERHPREGSKAS-EHSSGDLIFPSYFVRQTGGSLLTEPCRLKLQVE 2213

  Fly  1351 RNLSYTWYRDVPELNLSGRLKSIELTLFADDYALVMLVLNRNLNEGLEEFPPSEEAPQEAQVRP- 1414
            |||.......|.::::.|.|.|:..:|....|.|:..:|..||.|.:|:|           :|| 
Mouse  2214 RNLDKEISHTVADISVHGSLSSVHCSLDLCKYKLIRGLLENNLGEPIEDF-----------MRPY 2267

  Fly  1415 ERRNSRAGRLSRTVQVSPIREKIHESIKFNFQFDGVVINLME---GEGAG-LARFGIYFLSVKGT 1475
            :.::.|.    .||    :..:::..:.|......|.:.|.:   .||.| ||||......:...
Mouse  2268 DLQDPRI----HTV----LSGEVYTCMCFLIDMVNVSLELKDPKGKEGTGSLARFDFKKCKLLYE 2324

  Fly  1476 KLDNGTLSTSVVLCNIQMDDMRSNSKSQIRQYLSRKDWVQPKLDTDEIIDACY--------NERN 1532
            ...|.|.|.::|..::...|.|         |..:|    |......:.:..:        .:.:
Mouse  2325 SFSNQTKSINLVSHSMMAFDTR---------YSGQK----PSHGMTNVFNCIFQPSKSSSATQGS 2376

  Fly  1533 FMVDVTAIIKEDDTFAEVRVRGFDLIVCIDFLLKLTTFLTLPPEENPRESVYIKPA----PVSET 1593
            ..:::.....:|.:...|.:....:.:..|:||.:..||..|.:...:.   :.||    ..||:
Mouse  2377 IQIELHFRSTKDSSCFTVVLNNLRVFLIFDWLLLVHDFLHTPSDIKKQN---VTPARHRNASSES 2438

  Fly  1594 ARDTKHSIRSSAILAAQELVPVESSSHEVPNRKMNLILHIDEPDIILVENLEDLNTSCIIFNAQV 1658
            |...| :::|..:.....| ||.:..|      :.:.:::...:.::||::...:|:.||.....
Mouse  2439 AVVPK-TVKSGVVTKRSSL-PVSNERH------LEVKVNVTGTEFVVVEDVSCFDTNAIILKGTT 2495

  Fly  1659 HLNYRSINDKQIVNGQIDALKMYMCAFLPERREMTRHYILHPCVISLQ----GSTPEEEG----- 1714
            .|.|:.....:..:|.:..::::.|....|  :.|...|:.|..|.::    .|.....|     
Mouse  2496 VLTYKPRFVDRPFSGSLFGIEVFSCRLGNE--QDTALSIVDPVQIQVELVGNSSYQNSSGLMDAF 2558

  Fly  1715 --------MHISLKLSDIIINVSPATIELL--------------NKAMLSVSSGTMTKCA----- 1752
                    :.|.|:..||.::.:...:.|.              :.:.|.|.|   ..|:     
Mouse  2559 NSEDFPPILEIQLQALDIRLSYNDVQLFLAIAKSIPEQASAAAPDSSALEVDS---ISCSLPGAS 2620

  Fly  1753 -IAEESRNYSN----------------------------LWHQHHFHSRTYWFTKVEQGVDALEA 1788
             |.|:.|..|.                            |..|........|..|..:.:.:|..
Mouse  2621 RIGEDVREGSRHTLDPVLELQLARLQELGFSMDDCRKALLVCQGQLKKAASWLFKNAEPLKSLSL 2685

  Fly  1789 EQRSVSTDN------------EKQKTEKCVIEIPSITLVIESGVGYYTKPLISLDTRITAVFNNW 1841
            ...| |.||            |.:....|:..|..   .::..|     ||..|.........:.
Mouse  2686 VSSS-SRDNPGTMPAPRISGVEVKAESVCICFIDD---CMDCDV-----PLAELTFSRLNFLQHI 2741

  Fly  1842 SRSLTAHGSLTLNMNYYNQALAEWEPIIELNEVIGRNGVREYTPWELKFEMGMEKVQSELEDDAE 1906
            ..:.......||:.:|||:||:.|||.||              ||......     |.:......
Mouse  2742 RTNPEGFAHFTLSGDYYNRALSGWEPFIE--------------PWPCSVSW-----QQQASSRLH 2787

  Fly  1907 QQAMHMNIHSAETLEITLSKTCLGLLSELAEAFSQAIDQNGLTKPDIVAPYVLEND--------- 1962
            ...:.:...:...|:|.::              |..|||...||...:|.|..|:.         
Mouse  2788 PPRLKLEAKAKRRLDINIT--------------SVLIDQYISTKESWLADYCKEDKETESAKTED 2838

  Fly  1963 -TGFDVN---------------------LNLRKGIFTLHEV----------------HRGGTPVG 1989
             .|..|:                     .||...|:...||                |.|.|...
Mouse  2839 WMGSSVDPPCFGQSLPLVYLRTRSTASLTNLEHQIYARAEVKTPKRRQPFVPFALRNHTGCTLWF 2903

  Fly  1990 A--NSTLLMVAQSEEVDPSVIKTCTISTGGRAYLQTKDLSTLSE--------------------- 2031
            |  .:|....|.|....|.|     :..|..|:|.  |...:||                     
Mouse  2904 ATLTTTPTRAALSHSGSPGV-----VPEGNGAFLD--DAHNVSEWREVLTGEEIPFEFEARGKLR 2961

  Fly  2032 ----EDSEDYTLYVTIGDINKEIALPVSKSDTRFF-------NLMRST----------------- 2068
                .|...:.|.|.:....:...:.|.|..| ||       |...||                 
Mouse  2962 HRHTHDLRIHQLQVRVNGWEQVSPVSVDKVGT-FFRYAAPDKNSSSSTIGSPSSRTNIIHPQVYF 3025

  Fly  2069 -SHEPWGIISEVKQEYGTTKV-NIHGVVSVHNHFTTGLNIYRRNP-APTAQCFEDIFVGRVRPGE 2130
             |..|..::..|..|....|| .:...:.|.|...|.:.:...:| ||.    :.:.:..:.||:
Mouse  3026 SSLPPVRVVFAVTMEGSARKVITVRSALIVKNRLETPMELRLDSPSAPD----KPVVLPAIMPGD 3086

  Fly  2131 VFHVPLH----AIYAESKDL--FFSMRGYRRSVQGISW------ASNPSDLNYSHQLHCDPTNTF 2183
            .|.||||    .:.|..|.:  ||..       ..|.|      |...|.....|.:..:.:..|
Mouse  3087 SFAVPLHLTSWRLQARPKGMGVFFCK-------VPIHWTNVVKTAEVSSSKRECHSMDTEKSRFF 3144

  Fly  2184 EPLIMNARRSKSEVY--------FENTNKYTLLSAFYTIHLRPPLYLRNSLPINIQVSVAGCSVR 2240
            ...:    ..|.|.|        |.::.|.......:||:|.|.:.:.|.||..:...|.|..:.
Mouse  3145 RFCV----AIKKENYPDYMPSNIFSDSAKQIFRQPGHTIYLLPTVVICNLLPCELDFYVKGMPIN 3205

  Fly  2241 ------KEDGLDAQSSQRFVDRGYRKEDFLDYGEKPVNSGDVLHLPTVRLASKGKESKSFLVVRL 2299
                  ||..|....:.:.::.|...|:|....|..:..|...::..:||....:...: |.:|:
Mouse  3206 GTLKPGKEAALPTADTSQNIELGVSLENFPLCKELLIPPGTQNYMVRMRLYDVNRRQLN-LTIRI 3269

  Fly  2300 VQYLEKDWSCATEIWDYTDDVITWTFSSYDSEMKVDMDLYVKTENRHGSLMLTLFSPFWMINKTG 2364
                    :|..|                                  |||.:.:.:|:|:|||||
Mouse  3270 --------ACRAE----------------------------------GSLKIFISAPYWLINKTG 3292

  Fly  2365 MMLTYKSETTSVEVLYHPPEYS-----GPILFTFRDKLFFDKKKASIRIDNG-------QWSEKI 2417
            :.|.::.:....:......|:.     .|:||.:.||  ......::||..|       .|.:..
Mouse  3293 LPLIFRQDNAKTDAAGQFEEHELARSLSPLLFCYADK--EQPNLCTMRIGRGIHPEGMPGWCQGF 3355

  Fly  2418 PLDVAGSVGEVICFANNQK----YPVGVHNHLTQNSL--TKQITFIPFYIVCNKCHFDI-----E 2471
            .||....|..:.......:    |.:|:.....:...  |..:.|.|.|::.||....:     |
Mouse  3356 SLDGGSGVRALKVIQQGNRPGLIYNIGIDVKKGRGRYIDTCMVIFAPRYLLDNKSSHKLAFAQRE 3420

  Fly  2472 LQEQSRPADP--WLHLEPNEMEPL-WPRNDTKNNLVVR---VDGKI-TPAFDFTEVICTLLKLED 2529
            .......|:|  ::...|...... |||||....|.||   |...| :..|:..:.....:.:.|
Mouse  3421 FARGQGTANPNGYISTLPGSSVVFHWPRNDYDQLLCVRLMDVPNCIWSGGFEVNKNNSFHINMRD 3485

  Fly  2530 S--KYGGINVDVQTTEGGVY-ITFTDYKPADAPGLLINHTGKQIVYHEKGTKNEHILNAKSTIM- 2590
            :  |...:.|:: |..|..| |:|:|......|..:.|.:...:|:.:.|.....:......:| 
Mouse  3486 TLGKCFFLRVEI-TLRGATYRISFSDTDQLPPPFRIDNFSKVPVVFTQHGVAEPRLRTEVKPMMS 3549

  Fly  2591 --YAWDDPTGPKML---VFGTNKEETDLKRDGIGEVIMQDGGKVLWVSFL--------DGL---- 2638
              ||||:||.|..:   |.|....|.:...:.     .|:..::.:.:|:        .||    
Mouse  3550 LDYAWDEPTLPPFITLTVKGAGSSEINCNMND-----FQNNRQLYYENFIYIAATYTFSGLQEGK 3609

  Fly  2639 -----------------------QRVLL------------------FTENESIA-----NRTEST 2657
                                   |||:|                  ...:|..|     |:..:|
Mouse  3610 GRPVASHKAITCAELVLDVSPKTQRVILKKKEPGKRSQLWRMTGTGMLAHEGSAVPHNPNKPSAT 3674

  Fly  2658 ASLQ------------------------------SITQS-------IDLRIHGI------GLS-- 2677
            .|::                              |.||:       :...:||:      |||  
Mouse  3675 RSIEGSAILDIAGLAAVTDNRYEPLMLRKPDRRRSTTQTWSFHEGKLTCGLHGLVVQAKGGLSGL 3739

  Fly  2678 ------VINNETGLDIL----------------YLGVTSSGIIWE------------SKKVTKNR 2708
                  |:..::.:::|                ..|:.|..:|.:            .:|..::.
Mouse  3740 FDGAEVVLGPDSSMELLGPVPPEQQFANQKMRPGSGMLSIRVIPDGPTRALQITDFCQRKSERSS 3804

  Fly  2709 F--KELTINENALLEIE----YQKYLVHKSVNDVQTYKLDNKFPIDFDLMILKKTVERNLRRSFY 2767
            :  :||.:.|..|.::.    :|:..|...:.......|.||.|   :.::.......|:.   |
Mouse  3805 YEVEELPVTEQELQKLRNPDTHQELEVLVRLEGGVGVSLINKVP---EELVFASLTGINIH---Y 3863

  Fly  2768 PAIWLSRKSSPFQSQLHVKINRIQVDNQFLDPIFPVVL--APIPPPKSVASTTSLKPFIECSMVQ 2830
            ..:..|.       .|.:.|..:|||||.:....|.:|  .|:.....|..|   .|.::.:.|:
Mouse  3864 TQLAASH-------MLELSIQDVQVDNQLIGTTQPFMLYVTPLSNENEVIET---GPAVQVNAVK 3918

  Fly  2831 RIMPNSTVRQFKYARILIQEFLFKVDLNFLTAIAEMFAKEVSDEAAAKQFRQDVESIELPLSAFF 2895
            ....::....:|:..:..|.|..:::...|..:...|..:        |...:||..:..:....
Mouse  3919 FPSKSALTNIYKHLMVTAQRFTVQIEEKLLLKLLSFFGYD--------QAESEVEKYDENIHEKT 3975

  Fly  2896 EEHSLEEQKSFYDNLHLGPLKIHVSFSMAGSDTKALPGFLGSLVQGVGVTLTDVNDVVFRLAFFE 2960
            .|......:.:::||.:...:|.:|...:..    ||..|.:|...:|..|....|.|..|..|.
Mouse  3976 AEQGGTPTRYYFENLKISIPQIKLSVFTSNK----LPLDLKALKSTLGFPLIRFEDAVINLDPFT 4036

  Fly  2961 REYQFFSQKQLINEITSHYTGQALKQLYVLVLGLDVLGNPYGLVVGLKKGVEDLFYEPFQGAIQG 3025
            |.:.:.:::.:||:|..|:..:.|.|...::..:|.||||.||:..:.:||              
Mouse  4037 RVHPYETKEFIINDILKHFQEELLSQAARILGSVDFLGNPMGLLNDVSEGV-------------- 4087

  Fly  3026 PGEFAEGLVL--GVKSLFGHTVGGAAGAVSKITGAMGKGLAALTFDEDYQKKRRQGIQNKPKNFH 3088
                 .||:.  .|..|..:...|.:.:.:|..|.:..||.. |.|..:|.: |:.|:.......
Mouse  4088 -----TGLIKYGNVGGLIRNVTHGVSNSAAKFAGTLSDGLGK-TMDNRHQSE-REYIRYHAATSG 4145

  Fly  3089 EGLARSSKGLVMGFVDGVTGVVTKPVTGAR-DNGVEGFFKGLGKGAIGLVARPTAGVVDFASGSF 3152
            |.|.....||..|.:.|:|.|:|..|.|.: :.||.||..|||||.:|.|.:|.||.:||||.:.
Mouse  4146 EHLVAGIHGLAHGIIGGLTSVITSTVEGVKTEGGVSGFISGLGKGLVGTVTKPVAGALDFASETA 4210

  Fly  3153 EAVKRAADAS---EDVKRMRPPRFQHYDFVLRP-YCLMEATGNKIMKETDKGKFATTDN-----F 3208
            :||:..|..|   ...:|:|.||.......|.| |...:|.|.:.:       |..|||     |
Mouse  4211 QAVRDTATLSGPRTQAQRVRKPRCCTGPQGLLPRYSESQAEGQEQL-------FKLTDNIQDEFF 4268

  Fly  3209 IHCEEIIQKSEYLVVTNYRVM-------YVQRNEMF 3237
            |..|.|   ..|.|:.:.:.:       ||.|..:|
Mouse  4269 IAVENI---DSYCVLISSKAVYFLKSGDYVDREAIF 4301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps13NP_001260781.1 Chorein_N 4..113 CDD:315323 41/108 (38%)
VPS13 140..370 CDD:318996 62/236 (26%)
VPS13_mid_rpt 574..807 CDD:318998 61/298 (20%)
SHR-BD 2349..2600 CDD:310922 65/286 (23%)
VPS13 <2701..3232 CDD:330393 134/557 (24%)
VPS13_C 2904..3074 CDD:318997 41/171 (24%)
Vps13dNP_001263431.1 MRS6 1..>1270 CDD:227376 260/1322 (20%)
VPS13 140..357 CDD:374880 62/238 (26%)
MRS6 <2466..>3103 CDD:227376 124/695 (18%)
UBA_VP13D 2642..2677 CDD:270491 4/34 (12%)
SHR-BD 3277..3560 CDD:369020 65/285 (23%)
MRS6 <3838..4300 CDD:227376 129/520 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5043
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1642
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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