Sequence 1: | NP_001260781.1 | Gene: | Vps13 / 35693 | FlyBaseID: | FBgn0033194 | Length: | 3321 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001263431.1 | Gene: | Vps13d / 230895 | MGIID: | 2448530 | Length: | 4390 | Species: | Mus musculus |
Alignment Length: | 4586 | Identity: | 832/4586 - (18%) |
---|---|---|---|
Similarity: | 1466/4586 - (31%) | Gaps: | 1635/4586 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 VFEAVVADVLNKVLGDYIENLDRNQLKIGIWGGDVVLQNLKIRENALDELDLPVQLIYGYLGKLV 66
Fly 67 LKIPWKNLYSQPVIVNIEDLYVLVSPNNNVQYNAEKEAKYEMDLKKAALDALEAARKKELEMDQP 131
Fly 132 KADA---GFAEKLTAQIVNNLQVQITNVHLRYEDTTTTGS-PFSFGISLHELELYTTDCDWEKCY 192
Fly 193 MAQQASQVFKIANLSCLSAY--LNCGGQLYANNKSDLSQ-QFKTNIACKETKPNYNYVLGPISCN 254
Fly 255 AKLKLNMNPELDDPPF---EKPKIDLTLEMEKLNVGLTNTQFDNLMKLGDAMNRQQLGIPYRKYR 316
Fly 317 PYNIPYKGHARDWWHFAITSILEEEVRKPRESWTWGHIKTHRERCNTYAQKYKEQCLSKKPSAVL 381
Fly 382 T-----ETCRLLETELDVFNLLLIRQRVNIEIAKQREAV-----------------PEQKSG--- 421
Fly 422 ------WFSGW-GWGGGAKKDDQTTSQKLVEKFEAAMTSEEKEKM--YRAIGYQENAKPTD---- 473
Fly 474 ----LPESYEAIRMNFKLIALEVGLYKDERNSSAATKDFHELPSLVLLNFSMATALITQRPAAEA 534
Fly 535 ISIIAGMREIKVTGL------TRNDYTPLLV-------ESKITDEFNL----------------- 569
Fly 570 ---LEVFFETNPLDKLCDQRVKVVARPLQITYDAPTILALINAFQTPGDVTLSKF---------- 621
Fly 622 EDAASTKISNFKERSATGMQYMIDKKAVLD-----------VDILLMPNILVVPHKGVYDAGNVS 675
Fly 676 LLVVSMGQVHLSS---QPRRESN----KLQHLFSAGEDKD------------------------- 708
Fly 709 -----------EILKTVMENAYDRFTVAVDDVQMLVVRAGEPWQNALAEANSTEMHVLRP--VSL 760
Fly 761 KVTAALCVVDNDPRLPNIKVDIDLPAILVNVSEDRIFLAIKVATSIPLPEQK------------- 812
Fly 813 --------EPASRLTQT------------------------------------------------ 821
Fly 822 ----------------------------------------------------------------- 821
Fly 822 --------NSRSSMSIS-----------------NFINKE------------------------- 836
Fly 837 ----VKKIGPSASGSSASKD-----PLLDEI---------IQYT--------------------- 862
Fly 863 -----------------------------SLDVNFSLG--------------------------- 871
Fly 872 ---------EINFVLFQ---------------SSRKC---------------------------- 884
Fly 885 ------------------------ETSPDVSIEFLTPD--------------GDVLPSQ------ 905
Fly 906 --LTENIQEPIEELP--PTPPQQI-----------------------LSIDIRRL---------- 933
Fly 934 ---------------------------EAHFV--------------------------------- 938
Fly 939 -SKTYESVATVKLGDINLRQYD------------------------------------------- 959
Fly 960 CQDSDMDVLDVIYTPKQENSSNYLFTVSCTIADKSSPEFSTKYNSTEQLVVAN------------ 1012
Fly 1013 ----------------FEV-----------LQIVLHQECLQRIME-------------------- 1030
Fly 1031 ------------------------------------VVNNFQRNLDLVL---------------- 1043
Fly 1044 ---SSTRPRDRMGSIGGGDGIKRTLNVILEDTEEIMTTDQMKRRKK-------------TRRTHV 1092
Fly 1093 V------------------------ETVKVRVIANLD----------------QVGLVLTGRKRP 1117
Fly 1118 IAEMNVKKFVSSLIIKSSYTEVNIGLKDIQVLDLNPY-TIHKNILSIVGKDAFNCQIVIYNKEET 1181
Fly 1182 QDYNSDDMKITVDIGCMKIIFLNWFVAGVMNFLNNFTAAQATIS-QAGAAAAESARQKAMDAYET 1245
Fly 1246 ATRMKLNIRIKAPIIIVPIGSQDRNALLLDLGLLELTNNTV------------------------ 1286
Fly 1287 ---------------------------------------------------------EVAVAEEE 1294
Fly 1295 RLAVID--EIKLQICDVKISKIVLLDGNESTVDEVDAEVGFLSKF-------NMMNPMSCTLSIT 1350
Fly 1351 RNLSYTWYRDVPELNLSGRLKSIELTLFADDYALVMLVLNRNLNEGLEEFPPSEEAPQEAQVRP- 1414
Fly 1415 ERRNSRAGRLSRTVQVSPIREKIHESIKFNFQFDGVVINLME---GEGAG-LARFGIYFLSVKGT 1475
Fly 1476 KLDNGTLSTSVVLCNIQMDDMRSNSKSQIRQYLSRKDWVQPKLDTDEIIDACY--------NERN 1532
Fly 1533 FMVDVTAIIKEDDTFAEVRVRGFDLIVCIDFLLKLTTFLTLPPEENPRESVYIKPA----PVSET 1593
Fly 1594 ARDTKHSIRSSAILAAQELVPVESSSHEVPNRKMNLILHIDEPDIILVENLEDLNTSCIIFNAQV 1658
Fly 1659 HLNYRSINDKQIVNGQIDALKMYMCAFLPERREMTRHYILHPCVISLQ----GSTPEEEG----- 1714
Fly 1715 --------MHISLKLSDIIINVSPATIELL--------------NKAMLSVSSGTMTKCA----- 1752
Fly 1753 -IAEESRNYSN----------------------------LWHQHHFHSRTYWFTKVEQGVDALEA 1788
Fly 1789 EQRSVSTDN------------EKQKTEKCVIEIPSITLVIESGVGYYTKPLISLDTRITAVFNNW 1841
Fly 1842 SRSLTAHGSLTLNMNYYNQALAEWEPIIELNEVIGRNGVREYTPWELKFEMGMEKVQSELEDDAE 1906
Fly 1907 QQAMHMNIHSAETLEITLSKTCLGLLSELAEAFSQAIDQNGLTKPDIVAPYVLEND--------- 1962
Fly 1963 -TGFDVN---------------------LNLRKGIFTLHEV----------------HRGGTPVG 1989
Fly 1990 A--NSTLLMVAQSEEVDPSVIKTCTISTGGRAYLQTKDLSTLSE--------------------- 2031
Fly 2032 ----EDSEDYTLYVTIGDINKEIALPVSKSDTRFF-------NLMRST----------------- 2068
Fly 2069 -SHEPWGIISEVKQEYGTTKV-NIHGVVSVHNHFTTGLNIYRRNP-APTAQCFEDIFVGRVRPGE 2130
Fly 2131 VFHVPLH----AIYAESKDL--FFSMRGYRRSVQGISW------ASNPSDLNYSHQLHCDPTNTF 2183
Fly 2184 EPLIMNARRSKSEVY--------FENTNKYTLLSAFYTIHLRPPLYLRNSLPINIQVSVAGCSVR 2240
Fly 2241 ------KEDGLDAQSSQRFVDRGYRKEDFLDYGEKPVNSGDVLHLPTVRLASKGKESKSFLVVRL 2299
Fly 2300 VQYLEKDWSCATEIWDYTDDVITWTFSSYDSEMKVDMDLYVKTENRHGSLMLTLFSPFWMINKTG 2364
Fly 2365 MMLTYKSETTSVEVLYHPPEYS-----GPILFTFRDKLFFDKKKASIRIDNG-------QWSEKI 2417
Fly 2418 PLDVAGSVGEVICFANNQK----YPVGVHNHLTQNSL--TKQITFIPFYIVCNKCHFDI-----E 2471
Fly 2472 LQEQSRPADP--WLHLEPNEMEPL-WPRNDTKNNLVVR---VDGKI-TPAFDFTEVICTLLKLED 2529
Fly 2530 S--KYGGINVDVQTTEGGVY-ITFTDYKPADAPGLLINHTGKQIVYHEKGTKNEHILNAKSTIM- 2590
Fly 2591 --YAWDDPTGPKML---VFGTNKEETDLKRDGIGEVIMQDGGKVLWVSFL--------DGL---- 2638
Fly 2639 -----------------------QRVLL------------------FTENESIA-----NRTEST 2657
Fly 2658 ASLQ------------------------------SITQS-------IDLRIHGI------GLS-- 2677
Fly 2678 ------VINNETGLDIL----------------YLGVTSSGIIWE------------SKKVTKNR 2708
Fly 2709 F--KELTINENALLEIE----YQKYLVHKSVNDVQTYKLDNKFPIDFDLMILKKTVERNLRRSFY 2767
Fly 2768 PAIWLSRKSSPFQSQLHVKINRIQVDNQFLDPIFPVVL--APIPPPKSVASTTSLKPFIECSMVQ 2830
Fly 2831 RIMPNSTVRQFKYARILIQEFLFKVDLNFLTAIAEMFAKEVSDEAAAKQFRQDVESIELPLSAFF 2895
Fly 2896 EEHSLEEQKSFYDNLHLGPLKIHVSFSMAGSDTKALPGFLGSLVQGVGVTLTDVNDVVFRLAFFE 2960
Fly 2961 REYQFFSQKQLINEITSHYTGQALKQLYVLVLGLDVLGNPYGLVVGLKKGVEDLFYEPFQGAIQG 3025
Fly 3026 PGEFAEGLVL--GVKSLFGHTVGGAAGAVSKITGAMGKGLAALTFDEDYQKKRRQGIQNKPKNFH 3088
Fly 3089 EGLARSSKGLVMGFVDGVTGVVTKPVTGAR-DNGVEGFFKGLGKGAIGLVARPTAGVVDFASGSF 3152
Fly 3153 EAVKRAADAS---EDVKRMRPPRFQHYDFVLRP-YCLMEATGNKIMKETDKGKFATTDN-----F 3208
Fly 3209 IHCEEIIQKSEYLVVTNYRVM-------YVQRNEMF 3237 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13 | NP_001260781.1 | Chorein_N | 4..113 | CDD:315323 | 41/108 (38%) |
VPS13 | 140..370 | CDD:318996 | 62/236 (26%) | ||
VPS13_mid_rpt | 574..807 | CDD:318998 | 61/298 (20%) | ||
SHR-BD | 2349..2600 | CDD:310922 | 65/286 (23%) | ||
VPS13 | <2701..3232 | CDD:330393 | 134/557 (24%) | ||
VPS13_C | 2904..3074 | CDD:318997 | 41/171 (24%) | ||
Vps13d | NP_001263431.1 | MRS6 | 1..>1270 | CDD:227376 | 260/1322 (20%) |
VPS13 | 140..357 | CDD:374880 | 62/238 (26%) | ||
MRS6 | <2466..>3103 | CDD:227376 | 124/695 (18%) | ||
UBA_VP13D | 2642..2677 | CDD:270491 | 4/34 (12%) | ||
SHR-BD | 3277..3560 | CDD:369020 | 65/285 (23%) | ||
MRS6 | <3838..4300 | CDD:227376 | 129/520 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5043 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |