DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps13 and VPS13B

DIOPT Version :9

Sequence 1:NP_001260781.1 Gene:Vps13 / 35693 FlyBaseID:FBgn0033194 Length:3321 Species:Drosophila melanogaster
Sequence 2:NP_060360.3 Gene:VPS13B / 157680 HGNCID:2183 Length:4022 Species:Homo sapiens


Alignment Length:4288 Identity:757/4288 - (17%)
Similarity:1354/4288 - (31%) Gaps:1554/4288 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VFEAVVADVLNKVLGDYIENLDRNQLKIGIWGGDVVLQNLKIRENALD-ELDLPVQLIYGYLGKL 65
            :.|:.|..:|...:..||:||..:.|::.:|||||||..|:::.:.|: ||.||...:.|::.:|
Human     1 MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSGHIHEL 65

  Fly    66 VLKIPWKNLYSQPVIVNIEDLYVLVSPNNNVQYNAEK--EAKYEMDLKKAALDALEAARKKELEM 128
            .:.:||..|.|:||::.|..:..::...:.:|.:.|.  .........::...:::..|.::...
Human    66 RIHVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTNRSTAESTKSSIKPRRMQQAAP 130

  Fly   129 DQPKADAGFAEKLTAQIVNNLQVQITNVHLRY-EDTTTTGSPFSFGISLHELELYTTDCDWEKCY 192
            ..|....|:.:.|..::|||:.:.|.|:.|:| ||...      ..:::...|.||....|::.:
Human   131 TDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIV------LSVNITSAECYTVGELWDRAF 189

  Fly   193 MAQQASQVF--KIANLSCLSAYLNCGGQLYANNKSDLSQQFKTNIACK---ETKPNYNYVLGPIS 252
            |...|:.:.  |:.|.|      :|...|...|.|...:.::..:..|   .|:.::.|.     
Human   190 MDISATDLVLRKVINFS------DCTVCLDKRNASGKIEFYQDPLLYKCSFRTRLHFTYE----- 243

  Fly   253 CNAKLKLNMNPELDDPPFEKPKIDLTLEMEKLNVGLTNTQ---FDNLMKLGDAM----------- 303
                   |:|.::..      .|.:...:|.|.:.:|:.|   |..:|:||.|:           
Human   244 -------NLNSKMPS------VIKIHTLVESLKLSITDQQLPMFIRIMQLGIALYYGEIGNFKEG 295

  Fly   304 --------NRQQLG------IPYRKYRPYNIPYKGHARDWWHFAITSILEEEVRKPRESWTWGHI 354
                    |:..||      ...|....|...:||.       .:.|..:||..:...||.|..:
Human   296 EIEDLTCHNKDMLGNITGSEDETRIDMQYPAQHKGQ-------ELYSQQDEEQPQGWVSWAWSFV 353

  Fly   355 K------------THRERCNTYAQKYKEQCLSKKPSAVL-------TETCRLLETELDVFNLLLI 400
            .            ...:..:|..|: |.|.| |.|...:       |.|.:|  ||:.|.:....
Human   354 PAIVSYDDGEEDFVGNDPASTMHQQ-KAQTL-KDPIVSIGFYCTKATVTFKL--TEMQVESSYYS 414

  Fly   401 RQRVNIEIAKQREAVPEQKSGWFSGWGWGGGAKKDDQTTSQKL---------------------- 443
            .|:|     |.:|.:..::.|                ||.:.|                      
Human   415 PQKV-----KSKEVLCWEQEG----------------TTVEALMMGEPFFDCQIGFVGCRAMCLK 458

  Fly   444 ----VEKFEAAMTSEEKEKMYRAIGYQENAKPTDLPESYEAIRMNFKLIALEVGLYKDERNSSAA 504
                |:.||..|...|.|..:...|...:.|             .|..:...:..|:...|    
Human   459 GIMGVKDFEENMNRSETEACFFICGDNLSTK-------------GFTYLTNSLFDYRSPEN---- 506

  Fly   505 TKDFHELPSLVLLNFSMATALITQRPAAEAISIIAGMREIKVTGLTRNDYTPLLVESKITDEFNL 569
                         |.:.|..::......|..:.||||:..   |....||  |......:.:.:.
Human   507 -------------NGTRAEFILDSTHHKETYTEIAGMQRF---GAFYMDY--LYTMENTSGKGST 553

  Fly   570 LEVFFETNPLDKLCDQRVK----VVARPLQITYDAPTILALINAFQTPGDVTLSKFEDAASTKIS 630
            .:..|.:...:.|...:.|    :|..||....|:..:..::.......:   .::|..:..| |
Human   554 NQQDFSSGKSEDLGTVQEKSTKSLVIGPLDFRLDSSAVHRILKMIVCALE---HEYEPYSRLK-S 614

  Fly   631 NFKERSATGMQYMIDKKAVLD-VDILLMPNILVVPHKGVYDAGNVSLL----VVSMGQVHLSSQP 690
            :.|:.:.|          :|: .::.|:...:...|.      :|:||    .:||.        
Human   615 DIKDENET----------ILNPEEVALLEEYIPTRHT------SVTLLKCTCTISMA-------- 655

  Fly   691 RRESNKLQHLFSA--GE-DKDEILKTVMENA---YDRFTVAVDDVQM-------------LVVRA 736
              |.|.|.||...  || :....:.|....:   .....:.||.:.:             :|...
Human   656 --EFNLLDHLLPVIMGEKNSSNFMNTTNFQSLRPLPSIRILVDKINLEHSVPMYAEQLVHVVSSL 718

  Fly   737 GEPWQNAL-------------AEANSTEMHVLRPVSLKV-----------------------TAA 765
            .:|..|.|             .:|..|.:.......|.|                       .:.
Human   719 TQPSDNLLHYCYVHCYLKIFGFQAGLTSLDCSGSYCLPVPVIPSFSTALYGKLLKLPTCWTKRSQ 783

  Fly   766 LCVVDNDPRLPNIKVD------IDLPAI------LVNVSE--------DRIFLAIKVATSIPLP- 809
            :.:.:....|||:.:.      :.|.||      |.|||.        :.|||:|.|.:..||| 
Human   784 IAITEGIFELPNLTIQATRAQTLLLQAIYQSWSHLGNVSSSAVIEALINEIFLSIGVKSKNPLPT 848

  Fly   810 --------EQKEPASRLTQTNSRSSMSISNFINKEV----KKIGPSASGSSASKD---------- 852
                    |.|..::.|.:..|.:..||.......|    :|:.|...|.|.:||          
Human   849 LEGSIQNVELKYCSTSLVKCASGTMGSIKICAKAPVDSGKEKLIPLLQGPSDTKDLHSTKWLNES 913

  Fly   853 --P---LLDEIIQYT----------------------SLDVNFSLGEINFVLFQ----SSRKCET 886
              |   |..:::.:|                      .|.||.......::::|    :||..:.
Human   914 RKPESLLAPDLMAFTIQVPQYIDYCHNSGAVLLCSIQGLAVNIDPILYTWLIYQPQKRTSRHMQQ 978

  Fly   887 SPDVSIEFLTP------DGDVLPS---------QLTENIQEPI------EELPPTPPQQ------ 924
            .|.|::..:.|      |...:.|         |.:|....|:      |..|.:.|.:      
Human   979 QPVVAVPLVMPVCRRKEDEVSIGSAPLAKQQSYQASEYASSPVKTKTVTESRPLSVPVKAMLNIS 1043

  Fly   925 ------------------------ILSIDIRRLEAHFVSKTYESVATVKLGDI--NLRQYDCQDS 963
                                    .|.::::.......:.:..|.:|:..|||  .:|.:....:
Human  1044 ESCRSPEERMKEFIGIVWNAVKHLTLQLEVQSCCVFIPNDSLPSPSTIVSGDIPGTVRSWYHGQT 1108

  Fly   964 DM-------------------------DVLDVIYTPKQENSSNYLFTVS---------------- 987
            .|                         ::..||..|..|....:.:|:|                
Human  1109 SMPGTLVLCLPQIKIISAGHKYMEPLQEIPFVIPRPILEEGDAFPWTISLHNFSIYTLLGKQVTL 1173

  Fly   988 -------C--TIADKSSPEFSTKYNSTEQLVV---ANFEVL-------QIVLHQECLQRIMEVVN 1033
                   |  |:|..|....:|..::....||   .:.|.|       |:.|..|....:.:|.|
Human  1174 CLVEPMGCTSTLAVTSQKLLATGPDTRHSFVVCLHVDLESLEIKCSNPQVQLFYELTDIMNKVWN 1238

  Fly  1034 NFQRNLDLVLSSTRPRDRMGSIGGGDGIKRTLNVILEDTE------EIMTTDQMKRRKKTRRTHV 1092
            ..|:..:|.||.|.|....|.:.... ::.::.....||.      :|.||.:....:....:..
Human  1239 KIQKRGNLNLSPTSPETMAGPVPTSP-VRSSIGTAPPDTSTCSPSADIGTTTEGDSIQAGEESPF 1302

  Fly  1093 VETVKV-RVIANLDQV-GLVLTGRKRPIAEMNVKKFVSSLIIKSSYTEVNIGLKDIQVLDLNPYT 1155
            .::|.: :..:|:... |.|....:..:.::.:|.|...        ..|.|.:...|.:|...:
Human  1303 SDSVTLEQTTSNIGGTSGRVSLWMQWVLPKITIKLFAPD--------PENKGTEVCMVSELEDLS 1359

  Fly  1156 IHKNILSIVGKDAFNCQIVIYNKEETQDYNSDDMKITVDIGCMKIIFLNWFVAGVMNFLNNFTAA 1220
            ...::..:..|  ..|:|        :.:|.|..:.::...|       |               
Human  1360 ASIDVQDVYTK--VKCKI--------ESFNIDHYRSSLGEEC-------W--------------- 1392

  Fly  1221 QATISQAGAAAAESARQKAMDAYETATRMKLNIRIKAPIIIVPIGSQD-----------RNALLL 1274
              ::.|.|.            .:.:.|. |||.|   .:::.||..||           ....||
Human  1393 --SLGQCGG------------VFLSCTD-KLNRR---TLLVRPISKQDPFSNCSGFFPSTTTKLL 1439

  Fly  1275 D-----LGLLEL------TNNTVEVAVAEEERLAVIDEIKLQICDVKISKIVLLDGNESTVDEV- 1327
            |     .|.|.|      |.|......:..||.:.          .|:|: .|:||:...:.|: 
Human  1440 DGTHQQHGFLSLTYTKAVTKNVRHKLTSRNERRSF----------HKLSE-GLMDGSPHFLHEIL 1493

  Fly  1328 -DAEV-GFLSKFNMMNPMSCTLSITRNLSYTWYRDVPELNL-SGRLKSIELTLFADDYALVMLVL 1389
             .|:. ..:..|.::|.::.........:....|..|...: :..|.|..|.|...:.:::.:.:
Human  1494 LSAQAFDIVLYFPLLNAIASIFQAKLPKTQKEKRKSPGQPMRTHTLTSRNLPLIYVNTSVIRIFI 1558

  Fly  1390 NRNLNEGLEEFPPSEEAPQEAQ------------VRPERRNS------RAGRLSRTVQVSPIREK 1436
            .:.     ||..|:.||.|.|:            :.|:..|.      |.....|.:.:..:|:.
Human  1559 PKT-----EEMQPTVEANQAAKEDTVVLKIGSVAMAPQADNPLGRSVLRKDIYQRALNLGILRDP 1618

  Fly  1437 IHESIKFNFQFDGVVINLMEGEGAGLARFGIYFLSVKGTKLDNGTLSTSVVLCNIQMDDMRSNSK 1501
            ..|.....:|.|...||:      |.|::  :.|..:...:..|.::.:.  .|.|...:..|..
Human  1619 GSEIEDRQYQIDLQSINI------GTAQW--HQLKPEKESVSGGVVTETE--RNSQNPALEWNMA 1673

  Fly  1502 SQIRQYLSRKDWVQPKLDTDEIIDACYNERNFMVDVTA--------IIKEDDTFAEVRVRGFDLI 1558
            |.||::..|:..:.|.| ||           |.|.:|.        ::..::...|      :::
Human  1674 SSIRRHQERRAILTPVL-TD-----------FSVRITGAPAVIFTKVVSPENLHTE------EIL 1720

  Fly  1559 VC-----------IDFLLK-----------LTTFLTLPPEENPRE-------------------- 1581
            ||           :||.|.           :.....|.|.....|                    
Human  1721 VCGHSLEVNITTNLDFFLSVAQVQLLHQLIVANMTGLEPSNKAAEISKQEQKKVDIFDGGMAETS 1785

  Fly  1582 --------------SVYIKPAPVSETARDTKHSI----RSSAILAAQELVPVE------------ 1616
                          ||.|:...:.:.:..::|.|    |.|:|:.....:|.:            
Human  1786 SRYSGAQDSGIGSDSVKIRIVQIEQHSGASQHRIARPSRQSSIVKNLNFIPFDIFITASRISLMT 1850

  Fly  1617 --------SSSHEVPNR----KMNLILHIDEPDI-------ILVENLEDLNTSCIIFNA------ 1656
                    |.|.|..|.    |.:|.|...:.|:       |.....|||..|.|.|.:      
Human  1851 YSCMALSKSKSQEQKNNEKTDKSSLNLPEVDSDVAKPNQACISTVTAEDLLRSSISFPSGKKIGV 1915

  Fly  1657 ----QVHLNYRSI-----------------------------------------NDKQIVNGQI- 1675
                .:|.:.||.                                         :.||.|...| 
Human  1916 LSLESLHASTRSSARQALGITIVRQPGRRGTGDLQLEPFLYFIVSQPSLLLSCHHRKQRVEVSIF 1980

  Fly  1676 DAL-----KMYMC----AFLPERREMTRHYILHPCVISLQ---GSTPEEEGM---HISLKLSDII 1725
            ||:     ..|.|    ..|||        .|..|.:.||   |....:.|:   .|:|::.|.:
Human  1981 DAVLKGVASDYKCIDPGKTLPE--------ALDYCTVWLQTVPGEIDSKSGIPPSFITLQIKDFL 2037

  Fly  1726 ---------------INVSPATIELLNKAMLSVSSGTMTKCAIAEESRNYSN-LWHQHHFHSRTY 1774
                           .|:|...::.:|..:..:.:.  ...|.:||:...|| :.::.......|
Human  2038 NGPADVNLDISKPLKANLSFTKLDQINLFLKKIKNA--HSLAHSEETSAMSNTMVNKDDLPVSKY 2100

  Fly  1775 WFTKVEQ------GVDALEAEQ---RSVSTDNEKQKTEKCVIEIPSITLVIESGVGYYTKPLISL 1830
            :..|:.:      ||..:.|::   |:||.      .:|..::...|.:.:|: |.:.:||.   
Human  2101 YRGKLSKPKIHGDGVQKISAQENMWRAVSC------FQKISVQTTQIVISMET-VPHTSKPC--- 2155

  Fly  1831 DTRITAVFNNWSRSLTAHGS-----LTLNMNYYNQALAEWEPIIELNEVIGRNGVREYT------ 1884
               :.|..:|.:.||:...:     :.|..::          ::.:|:.:.:..::|.:      
Human  2156 ---LLASLSNLNGSLSVKATQKVPGIILGSSF----------LLSINDFLLKTSLKERSRILIGP 2207

  Fly  1885 -----PWELKF---------EMGMEKVQSELEDDAEQ---QAMHMNIHSAETLEITLSKTCLGLL 1932
                 ..|.|:         |..:.|:..:|.....|   ...|:|              ||.||
Human  2208 CCATANLEAKWCKHSGNPGPEQSIPKISIDLRGGLLQVFWGQEHLN--------------CLVLL 2258

  Fly  1933 SELAEAFSQAIDQNGLTKPDIVAPYVLENDTGFDVNLNLRKGIFTLHEVHRGGTPVGANSTLLMV 1997
            .||...:                   |..:..|:|.::        ..|.:..:||..|.|....
Human  2259 HELLNGY-------------------LNEEGNFEVQVS--------EPVPQMSSPVEKNQTFKSE 2296

  Fly  1998 AQSEEVDPSVIKTCTISTGGRAYLQTKDLSTLSEEDSEDYTLYVTIGDINKEIALPVSKSDTRFF 2062
            ..|::          :.||...|:|          |:|             .:.|| ...:..|:
Human  2297 QSSDD----------LRTGLFQYVQ----------DAE-------------SLKLP-GVYEVLFY 2327

  Fly  2063 NLMRSTSHEP----WGIISEVKQEYGTTKVNIHGVVSVHNHFTTGLNIYRRNPAPTAQCFEDIFV 2123
            |   .|...|    |        .|...:|               |.:.|..|.| ....||..:
Human  2328 N---ETEDCPGMMLW--------RYPEPRV---------------LTLVRITPVP-FNTTEDPDI 2365

  Fly  2124 GRVRPGEVFHVPLHAIY-AESKDLFFSMRGYRRSVQGISWASNP-------------SD-----L 2169
            .....|:|..||....| .|.:.:|.:.|.:..|...:.....|             ||     |
Human  2366 STADLGDVLQVPCSLEYWDELQKVFVAFREFNLSESKVCELQLPDINLVNDQKKLVSSDLWRIVL 2430

  Fly  2170 NYSH--------------QLHCDPTNTFEPLIMNARRSKSEVYFENTNKYTLLSAFYTIHLR--- 2217
            |.|.              |..|||..|...|   |..::.:..|......:|..:|...||.   
Human  2431 NSSQNGADDQSSASESGSQSTCDPLVTPTAL---AACTRVDSCFTPWFVPSLCVSFQFAHLEFHL 2492

  Fly  2218 ----------PPLYLR-----NSLPINIQVSVAGC-------------SVRKEDGLDAQSSQRFV 2254
                      .|.||:     .::|..::..:...             ||.:|....||:..:.:
Human  2493 CHHLDQLGTAAPQYLQPFVSDRNMPSELEYMIVSFREPHMYLRQWNNGSVCQEIQFLAQADCKLL 2557

  Fly  2255 D-RGYRKED----FLDYGEKPVNSGDVLHL--PTVRLASKGKESKSFLVVRLVQYLEKDWSCATE 2312
            : |....:.    |..:|:..|:|..|..|  .||.:.|        :.|.|.|::....:.|.:
Human  2558 ECRNVTMQSVVKPFSIFGQMAVSSDVVEKLLDCTVIVDS--------VFVNLGQHVVHSLNTAIQ 2614

  Fly  2313 IWDYTDDVITWTFSSYDSEMKVDMDLYVKTENRHGSLMLTLFSPFWMINKTGMMLTYKSETTSVE 2377
            .|.                           :|:...:...:||.|.:.|.|...|.:....|...
Human  2615 AWQ---------------------------QNKCPEVEELVFSHFVICNDTQETLRFGQVDTDEN 2652

  Fly  2378 VL---YHPPEYSGPILFTFRDKLFFDKKKASIRI-----DNGQWSEKIPLDVAGSVGEVICFANN 2434
            :|   .|..:||      :|.    .|....:.|     .|.:|||...:|.||:....|.:...
Human  2653 ILLASLHSHQYS------WRS----HKSPQLLHICIEGWGNWRWSEPFSVDHAGTFIRTIQYRGR 2707

  Fly  2435 QKYPVGVHNHLTQNSLTKQITFIPFYIVCN-----------------------KCHFDIELQEQS 2476
            ....:.....|  |.:.|||......|:|:                       :.|||....:|.
Human  2708 TASLIIKVQQL--NGVQKQIIICGRQIICSYLSQSIELKVVQHYIGQDGQAVVREHFDCLTAKQK 2770

  Fly  2477 RPADPWLHLEPNEMEPL---------WPRN---DTK---NNLVVRVDGKITPAFDFTEVICTLLK 2526
            .|:   ..||.||:..|         |.|:   ::|   .::|::|....:   ....|.||:|.
Human  2771 LPS---YILENNELTELCVKAKGDEDWSRDVCLESKAPEYSIVIQVPSSNS---SIIYVWCTVLT 2829

  Fly  2527 LEDSKY-----------------------------------------GGINVDVQTTEGGV--YI 2548
            ||.:..                                         .|....:|..|..:  ::
Human  2830 LEPNSQVQQRMIVFSPLFIMRSHLPDPIIIHLEKRSLGLSETQIIPGKGQEKPLQNIEPDLVHHL 2894

  Fly  2549 TF---TDYKPADAPGLLINHTGKQIV--YHEKGTKNEHILNA--------------------KST 2588
            ||   .:|.|:|....:.....|||.  .|..||.|: ||:.                    ::.
Human  2895 TFQAREEYDPSDCAVPISTSLIKQIATKVHPGGTVNQ-ILDEFYGPEKSLQPIWPYNKKDSDRNE 2958

  Fly  2589 IMYAWDDPTGPKMLVFG----------------TNKEETDL-KRDGIGEVIMQDGGKVLW-VSFL 2635
            .:..||.|...|:.::.                .|:.:.|| ..:|...|:....||::. .:|.
Human  2959 QLSQWDSPMRVKLSIWKPYVRTLLIELLPWALLINESKWDLWLFEGEKIVLQVPAGKIIIPPNFQ 3023

  Fly  2636 DGLQRVLLFTENESIANRTESTASLQSITQSIDLRIHGIG-LSVINNETGLDI-LYLGV------ 2692
            :..| :.::..|.:..:::.:...:.::| |...:..|.| :..::.|..:|. :.||.      
Human  3024 EAFQ-IGIYWANTNTVHKSVAIKLVHNLT-SPKWKDGGNGEVVTLDEEAFVDTEIRLGAFPGHQK 3086

  Fly  2693 ----TSSGIIWESKKVTKNRFKELTINENALLEIEYQKYL----VHKS-----VNDVQTYKL--- 2741
                ..|.::.:..::.:...|...|| |...:|.|:..|    .|..     |.|..|:.:   
Human  3087 LCQFCISSMVQQGIQIIQIEDKTTIIN-NTPYQIFYKPQLSVCNPHSGKEYFRVPDSATFSICPG 3150

  Fly  2742 -------DNKFPIDFDLM------ILKKT-VERNLRRSFYPA-------IW----LSRKSSPFQS 2781
                   .:..|. :|||      :|..: :::.:...|.||       .|    :.|...|.||
Human  3151 GEQPAMKSSSLPC-WDLMPDISQSVLDASLLQKQIMLGFSPAPGADSSQCWSLPAIVRPEFPRQS 3214

  Fly  2782 ----------------------QLHVKIN----------RIQVDNQ----------FLD-PIFPV 2803
                                  |.|:.:.          |:.:.|:          ..| |.|.|
Human  3215 VAVPLGNFRENGFCTRAIVLTYQEHLGVTYLTLSEDPSPRVIIHNRCPVKMLIKENIKDIPKFEV 3279

  Fly  2804 VLAPIPPPKSV-------------ASTTSLKPFIECSMVQRIMPNSTVRQFKYARILIQEFLFKV 2855
            ....||...|:             ..|..|.|    |::.|:.|...|         ..|:...:
Human  3280 YCKKIPSECSIHHELYHQISSYPDCKTKDLLP----SLLLRVEPLDEV---------TTEWSDAI 3331

  Fly  2856 DLN-------FLTAIA----------------------------------------EMFAKEVS- 2872
            |:|       |||...                                        :||..::| 
Human  3332 DINSQGTQVVFLTGFGYVYVDVVHQCGTVFITVAPEGKAGPILTNTNRAPEKIVTFKMFITQLSL 3396

  Fly  2873 --------DEAAAKQFRQDVESI-------------ELPLSAFFEEHSLE--------------- 2901
                    .:|:|:..|..:::|             |.|::|.||.:.:|               
Human  3397 AVFDDLTHHKASAELLRLTLDNIFLCVAPGAGPLPGEEPVAALFELYCVEICCGDLQLDNQLYNK 3461

  Fly  2902 ------------------------------------EQKSFYD------------------NLHL 2912
                                                ::|.|..                  :..|
Human  3462 SNFHFAVLVCQGEKAEPIQCSKMQSLLISNKELEEYKEKCFIKLCITLNEGKSILCDINEFSFEL 3526

  Fly  2913 GPLKIHV-----------------SFSMAGSDTKALPGFLGSLVQGVGVT---LTDVNDVVFR-- 2955
            .|.:::|                 :..:||..|. |.|  |..|..:.||   ...||.|..|  
Human  3527 KPARLYVEDTFVYYIKTLFDTYLPNSRLAGHSTH-LSG--GKQVLPMQVTQHARALVNPVKLRKL 3588

  Fly  2956 -------------------------LAF--FEREYQFFSQKQLINEITSHYTGQALKQLYVLVLG 2993
                                     |:|  |||...|.:.:||::.:..||...||.:...:|..
Human  3589 VIQPVNLLVSIHASLKLYIASDHTPLSFSVFERGPIFTTARQLVHALAMHYAAGALFRAGWVVGS 3653

  Fly  2994 LDVLGNPYGLVVGLKKGVEDLFYEPFQGAIQGPGEFAEGLVLGVKSLFGHTVGGAAGAVSKITGA 3058
            ||:||:|..||..:..||.|.|..|::|..:|||.|..|:..|..|...|...|...:::.:..:
Human  3654 LDILGSPASLVRSIGNGVADFFRLPYEGLTRGPGAFVSGVSRGTTSFVKHISKGTLTSITNLATS 3718

  Fly  3059 MGKGLAALTFDEDYQKKRRQGIQNKPKNFHEGLARSSKGLVMGFVDGVTGVVTKPV--------- 3114
            :.:.:..|:.||::..::.:..:..|::..|||.:....|.:..:..:.|:|.:|:         
Human  3719 LARNMDRLSLDEEHYNRQEEWRRQLPESLGEGLRQGLSRLGISLLGAIAGIVDQPMQNFQKTSEA 3783

  Fly  3115 TGARDNGVEGFFKGLGKGAIGLVARPTAGVVDFASGSFEAVKRAADASEDVKRMRPPRFQHYD 3177
            ..:..:..:|...|:|||.:|:..:|..|..:..|.:...:...|..|:..|:...|...|.|
Human  3784 QASAGHKAKGVISGVGKGIMGVFTKPIGGAAELVSQTGYGILHGAGLSQLPKQRHQPSDLHAD 3846

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps13NP_001260781.1 Chorein_N 4..113 CDD:315323 32/111 (29%)
VPS13 140..370 CDD:318996 53/275 (19%)
VPS13_mid_rpt 574..807 CDD:318998 53/316 (17%)
SHR-BD 2349..2600 CDD:310922 70/364 (19%)
VPS13 <2701..3232 CDD:330393 140/766 (18%)
VPS13_C 2904..3074 CDD:318997 56/236 (24%)
VPS13BNP_060360.3 Chorein_N 3..94 CDD:289396 30/90 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..134 2/33 (6%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1247..1314 11/67 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1860..1880 6/19 (32%)
SHR-BD <2632..>2712 CDD:284143 20/89 (22%)
VPS13_C 3585..3731 CDD:293514 38/145 (26%)
ATG_C 3733..3839 CDD:286423 20/105 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5043
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1642
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.930

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