Sequence 1: | NP_001260781.1 | Gene: | Vps13 / 35693 | FlyBaseID: | FBgn0033194 | Length: | 3321 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_060360.3 | Gene: | VPS13B / 157680 | HGNCID: | 2183 | Length: | 4022 | Species: | Homo sapiens |
Alignment Length: | 4288 | Identity: | 757/4288 - (17%) |
---|---|---|---|
Similarity: | 1354/4288 - (31%) | Gaps: | 1554/4288 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 VFEAVVADVLNKVLGDYIENLDRNQLKIGIWGGDVVLQNLKIRENALD-ELDLPVQLIYGYLGKL 65
Fly 66 VLKIPWKNLYSQPVIVNIEDLYVLVSPNNNVQYNAEK--EAKYEMDLKKAALDALEAARKKELEM 128
Fly 129 DQPKADAGFAEKLTAQIVNNLQVQITNVHLRY-EDTTTTGSPFSFGISLHELELYTTDCDWEKCY 192
Fly 193 MAQQASQVF--KIANLSCLSAYLNCGGQLYANNKSDLSQQFKTNIACK---ETKPNYNYVLGPIS 252
Fly 253 CNAKLKLNMNPELDDPPFEKPKIDLTLEMEKLNVGLTNTQ---FDNLMKLGDAM----------- 303
Fly 304 --------NRQQLG------IPYRKYRPYNIPYKGHARDWWHFAITSILEEEVRKPRESWTWGHI 354
Fly 355 K------------THRERCNTYAQKYKEQCLSKKPSAVL-------TETCRLLETELDVFNLLLI 400
Fly 401 RQRVNIEIAKQREAVPEQKSGWFSGWGWGGGAKKDDQTTSQKL---------------------- 443
Fly 444 ----VEKFEAAMTSEEKEKMYRAIGYQENAKPTDLPESYEAIRMNFKLIALEVGLYKDERNSSAA 504
Fly 505 TKDFHELPSLVLLNFSMATALITQRPAAEAISIIAGMREIKVTGLTRNDYTPLLVESKITDEFNL 569
Fly 570 LEVFFETNPLDKLCDQRVK----VVARPLQITYDAPTILALINAFQTPGDVTLSKFEDAASTKIS 630
Fly 631 NFKERSATGMQYMIDKKAVLD-VDILLMPNILVVPHKGVYDAGNVSLL----VVSMGQVHLSSQP 690
Fly 691 RRESNKLQHLFSA--GE-DKDEILKTVMENA---YDRFTVAVDDVQM-------------LVVRA 736
Fly 737 GEPWQNAL-------------AEANSTEMHVLRPVSLKV-----------------------TAA 765
Fly 766 LCVVDNDPRLPNIKVD------IDLPAI------LVNVSE--------DRIFLAIKVATSIPLP- 809
Fly 810 --------EQKEPASRLTQTNSRSSMSISNFINKEV----KKIGPSASGSSASKD---------- 852
Fly 853 --P---LLDEIIQYT----------------------SLDVNFSLGEINFVLFQ----SSRKCET 886
Fly 887 SPDVSIEFLTP------DGDVLPS---------QLTENIQEPI------EELPPTPPQQ------ 924
Fly 925 ------------------------ILSIDIRRLEAHFVSKTYESVATVKLGDI--NLRQYDCQDS 963
Fly 964 DM-------------------------DVLDVIYTPKQENSSNYLFTVS---------------- 987
Fly 988 -------C--TIADKSSPEFSTKYNSTEQLVV---ANFEVL-------QIVLHQECLQRIMEVVN 1033
Fly 1034 NFQRNLDLVLSSTRPRDRMGSIGGGDGIKRTLNVILEDTE------EIMTTDQMKRRKKTRRTHV 1092
Fly 1093 VETVKV-RVIANLDQV-GLVLTGRKRPIAEMNVKKFVSSLIIKSSYTEVNIGLKDIQVLDLNPYT 1155
Fly 1156 IHKNILSIVGKDAFNCQIVIYNKEETQDYNSDDMKITVDIGCMKIIFLNWFVAGVMNFLNNFTAA 1220
Fly 1221 QATISQAGAAAAESARQKAMDAYETATRMKLNIRIKAPIIIVPIGSQD-----------RNALLL 1274
Fly 1275 D-----LGLLEL------TNNTVEVAVAEEERLAVIDEIKLQICDVKISKIVLLDGNESTVDEV- 1327
Fly 1328 -DAEV-GFLSKFNMMNPMSCTLSITRNLSYTWYRDVPELNL-SGRLKSIELTLFADDYALVMLVL 1389
Fly 1390 NRNLNEGLEEFPPSEEAPQEAQ------------VRPERRNS------RAGRLSRTVQVSPIREK 1436
Fly 1437 IHESIKFNFQFDGVVINLMEGEGAGLARFGIYFLSVKGTKLDNGTLSTSVVLCNIQMDDMRSNSK 1501
Fly 1502 SQIRQYLSRKDWVQPKLDTDEIIDACYNERNFMVDVTA--------IIKEDDTFAEVRVRGFDLI 1558
Fly 1559 VC-----------IDFLLK-----------LTTFLTLPPEENPRE-------------------- 1581
Fly 1582 --------------SVYIKPAPVSETARDTKHSI----RSSAILAAQELVPVE------------ 1616
Fly 1617 --------SSSHEVPNR----KMNLILHIDEPDI-------ILVENLEDLNTSCIIFNA------ 1656
Fly 1657 ----QVHLNYRSI-----------------------------------------NDKQIVNGQI- 1675
Fly 1676 DAL-----KMYMC----AFLPERREMTRHYILHPCVISLQ---GSTPEEEGM---HISLKLSDII 1725
Fly 1726 ---------------INVSPATIELLNKAMLSVSSGTMTKCAIAEESRNYSN-LWHQHHFHSRTY 1774
Fly 1775 WFTKVEQ------GVDALEAEQ---RSVSTDNEKQKTEKCVIEIPSITLVIESGVGYYTKPLISL 1830
Fly 1831 DTRITAVFNNWSRSLTAHGS-----LTLNMNYYNQALAEWEPIIELNEVIGRNGVREYT------ 1884
Fly 1885 -----PWELKF---------EMGMEKVQSELEDDAEQ---QAMHMNIHSAETLEITLSKTCLGLL 1932
Fly 1933 SELAEAFSQAIDQNGLTKPDIVAPYVLENDTGFDVNLNLRKGIFTLHEVHRGGTPVGANSTLLMV 1997
Fly 1998 AQSEEVDPSVIKTCTISTGGRAYLQTKDLSTLSEEDSEDYTLYVTIGDINKEIALPVSKSDTRFF 2062
Fly 2063 NLMRSTSHEP----WGIISEVKQEYGTTKVNIHGVVSVHNHFTTGLNIYRRNPAPTAQCFEDIFV 2123
Fly 2124 GRVRPGEVFHVPLHAIY-AESKDLFFSMRGYRRSVQGISWASNP-------------SD-----L 2169
Fly 2170 NYSH--------------QLHCDPTNTFEPLIMNARRSKSEVYFENTNKYTLLSAFYTIHLR--- 2217
Fly 2218 ----------PPLYLR-----NSLPINIQVSVAGC-------------SVRKEDGLDAQSSQRFV 2254
Fly 2255 D-RGYRKED----FLDYGEKPVNSGDVLHL--PTVRLASKGKESKSFLVVRLVQYLEKDWSCATE 2312
Fly 2313 IWDYTDDVITWTFSSYDSEMKVDMDLYVKTENRHGSLMLTLFSPFWMINKTGMMLTYKSETTSVE 2377
Fly 2378 VL---YHPPEYSGPILFTFRDKLFFDKKKASIRI-----DNGQWSEKIPLDVAGSVGEVICFANN 2434
Fly 2435 QKYPVGVHNHLTQNSLTKQITFIPFYIVCN-----------------------KCHFDIELQEQS 2476
Fly 2477 RPADPWLHLEPNEMEPL---------WPRN---DTK---NNLVVRVDGKITPAFDFTEVICTLLK 2526
Fly 2527 LEDSKY-----------------------------------------GGINVDVQTTEGGV--YI 2548
Fly 2549 TF---TDYKPADAPGLLINHTGKQIV--YHEKGTKNEHILNA--------------------KST 2588
Fly 2589 IMYAWDDPTGPKMLVFG----------------TNKEETDL-KRDGIGEVIMQDGGKVLW-VSFL 2635
Fly 2636 DGLQRVLLFTENESIANRTESTASLQSITQSIDLRIHGIG-LSVINNETGLDI-LYLGV------ 2692
Fly 2693 ----TSSGIIWESKKVTKNRFKELTINENALLEIEYQKYL----VHKS-----VNDVQTYKL--- 2741
Fly 2742 -------DNKFPIDFDLM------ILKKT-VERNLRRSFYPA-------IW----LSRKSSPFQS 2781
Fly 2782 ----------------------QLHVKIN----------RIQVDNQ----------FLD-PIFPV 2803
Fly 2804 VLAPIPPPKSV-------------ASTTSLKPFIECSMVQRIMPNSTVRQFKYARILIQEFLFKV 2855
Fly 2856 DLN-------FLTAIA----------------------------------------EMFAKEVS- 2872
Fly 2873 --------DEAAAKQFRQDVESI-------------ELPLSAFFEEHSLE--------------- 2901
Fly 2902 ------------------------------------EQKSFYD------------------NLHL 2912
Fly 2913 GPLKIHV-----------------SFSMAGSDTKALPGFLGSLVQGVGVT---LTDVNDVVFR-- 2955
Fly 2956 -------------------------LAF--FEREYQFFSQKQLINEITSHYTGQALKQLYVLVLG 2993
Fly 2994 LDVLGNPYGLVVGLKKGVEDLFYEPFQGAIQGPGEFAEGLVLGVKSLFGHTVGGAAGAVSKITGA 3058
Fly 3059 MGKGLAALTFDEDYQKKRRQGIQNKPKNFHEGLARSSKGLVMGFVDGVTGVVTKPV--------- 3114
Fly 3115 TGARDNGVEGFFKGLGKGAIGLVARPTAGVVDFASGSFEAVKRAADASEDVKRMRPPRFQHYD 3177 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13 | NP_001260781.1 | Chorein_N | 4..113 | CDD:315323 | 32/111 (29%) |
VPS13 | 140..370 | CDD:318996 | 53/275 (19%) | ||
VPS13_mid_rpt | 574..807 | CDD:318998 | 53/316 (17%) | ||
SHR-BD | 2349..2600 | CDD:310922 | 70/364 (19%) | ||
VPS13 | <2701..3232 | CDD:330393 | 140/766 (18%) | ||
VPS13_C | 2904..3074 | CDD:318997 | 56/236 (24%) | ||
VPS13B | NP_060360.3 | Chorein_N | 3..94 | CDD:289396 | 30/90 (33%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 100..134 | 2/33 (6%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1247..1314 | 11/67 (16%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1860..1880 | 6/19 (32%) | |||
SHR-BD | <2632..>2712 | CDD:284143 | 20/89 (22%) | ||
VPS13_C | 3585..3731 | CDD:293514 | 38/145 (26%) | ||
ATG_C | 3733..3839 | CDD:286423 | 20/105 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5043 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.930 |