DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vps13 and vps13d

DIOPT Version :9

Sequence 1:NP_001260781.1 Gene:Vps13 / 35693 FlyBaseID:FBgn0033194 Length:3321 Species:Drosophila melanogaster
Sequence 2:XP_012822629.1 Gene:vps13d / 100490091 XenbaseID:XB-GENE-923472 Length:4384 Species:Xenopus tropicalis


Alignment Length:4605 Identity:839/4605 - (18%)
Similarity:1485/4605 - (32%) Gaps:1679/4605 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VFEAVVADVLNKVLGDYIENLDRNQLKIGIWGGDVVLQNLKIRENALDELDLPVQLIYGYLGKLV 66
            :.|.:||.|||..||.|:.||:.:||.|.:..|.|.|:||.::::||.||:||.::..|::||:.
 Frog     1 MLEGLVAWVLNTYLGKYVNNLNTDQLSIALLKGAVELENLPLKKDALKELELPFEVKAGFIGKIR 65

  Fly    67 LKIPWKNLYSQPVIVNIEDLYVLVSPNNNVQYNAEKEAKYEMDLKKAALDALEAARKKELEMDQP 131
            ::||:...:..|.:::|..|:::.:.:....::..||...|...|||.|.|||    ::.:.||.
 Frog    66 IQIPFYRPHLDPWVISISKLHLIGASDKQEGFDELKEKLLEKAHKKALLKALE----EKWKSDQE 126

  Fly   132 KADAGFAEKLTA----QIVNNLQVQITNVHLRYEDTTTTGS-PFSFGISLHELELYTTDCDWEKC 191
            :....:...:||    :||:|:::::.:||||:||..|..| ||:|||.:..:.:...      .
 Frog   127 RKGESYWYSVTASIVTRIVDNIELKVQDVHLRFEDGITDPSHPFAFGICIKSVSVQNA------V 185

  Fly   192 YMAQQASQVFKIANLSCLSAYLNCGGQLYAN-------NKSDLSQQFKTNIACKETKPNYNYVLG 249
            :...:.|...|..:::..|.|.:....|..:       :..|.|.:.:          ::.|:|.
 Frog   186 HEPVEKSMKKKQLDIADFSVYWDVNTTLLGDLPPGELQDAMDKSMESR----------DHQYILQ 240

  Fly   250 PISCNAKLKLNMNPELDDPPF---EKPKIDLTLEMEKLNVGLTNTQFDNLMKLGDAMNRQQLGIP 311
            ||...|.||.|.:.|    |.   .:|:|:..:.:|.:.:.|:..|:...::..|...|::..:.
 Frog   241 PICTLALLKRNCSKE----PLRSRHQPRIECDICLETIPLILSQVQYQQFVEFVDEFERKERQLK 301

  Fly   312 YRKYRPYNIPYKGHARDWWHFAITSILEEEVRKPRESWTWGHIKTHRERCNTYAQKYKEQCLSKK 376
            :||::| |:|.:.:.::||.||:.:.| .|:|:.|...|...| .||.|...|   |.::...:.
 Frog   302 FRKWKP-NVPVRKNCKEWWLFALNANL-SEIREQRRRSTLDFI-LHRARDAIY---YTDKHFDRI 360

  Fly   377 PSAVLTETCRLLETELD------VFNLLLIRQRVNIEIAKQREAVPEQ----------------- 418
            ....||..   .||:||      .|..|.|.|.:..|.:|:...:.|.                 
 Frog   361 KGIQLTNE---EETQLDRIEEEQSFEELKILQELVFERSKKEHEMAENLREPLSDPSASSPNSSL 422

  Fly   419 ----KSG-------WFSGW-GWGGGAKKDDQTTSQKLVEKFEAAMTSEEKEKMYRAIGYQENAKP 471
                .||       ||.|| ||.|    :.|.||.: :||.......:|.......:|..:...|
 Frog   423 KNSPSSGVLQYLQSWFPGWGGWYG----NYQETSAE-IEKLTQEQQQQEPWDSENIMGSDDFFDP 482

  Fly   472 --------TDLPESYEAIRMNFKLIALEVGLYKDERNSSAATKDFHELPSLVLLNFSMATALITQ 528
                    |.........::|.||....|.|...|::|..|    .|.| .:.|.||..|.....
 Frog   483 MADSANMNTFTKRDNVFAKLNLKLEGGTVTLLHKEKSSQEA----QETP-FMQLEFSGMTVRAES 542

  Fly   529 RPAAEAISIIA------------------------GMREIKVTGLTRNDY---TPLLVESKIT-D 565
            .|..::..::.                        .::|:.....|.|.:   |.:|..|..: .
 Frog   543 LPRRDSSLLLIQLNGLFLRDLATHGTIFPDLVYPNPLKELGSVSQTSNTHIGSTEVLSPSNSSGS 607

  Fly   566 EFNLLEVFFETNPLDKLCDQRVKVVARPLQITYDAPTILALINAFQTPGDVTLSKF--------- 621
            |..:.::.:|.||:....::|::|..|||.|.|: |..:..:..|...|.|..|.|         
 Frog   608 EAPVFKMLYEKNPVRSDFERRLEVSTRPLNIIYN-PQAITKVADFFYKGKVHSSGFGYQSELELR 671

  Fly   622 -EDAASTKISNFKERSATGMQYMIDKKAV-------------LDVDI--LLMPNILVVPHKGVYD 670
             .:||..:.:..|.::...::..||:..|             ||:..  ::.|:..|.|      
 Frog   672 VAEAARRQYNKLKMQTKAEIRQTIDRLLVGEFIENSRRWTVRLDISAPQVIFPDDFVSP------ 730

  Fly   671 AGNVSLLVVSMGQVHL-SSQPRRESNKLQHLFSAGED-KDEILKT-------------------- 713
              :..|:||.:|::.| :|:...:...|.:|.:...| .||..||                    
 Frog   731 --DPVLVVVDLGRILLTNSEDHYKGRVLDNLSTEVNDFSDEEYKTPLATPPSSPPPEVTSTCETE 793

  Fly   714 -------VMEN-----------AYDRFTVAVDDVQMLVVRAGEPWQNALAEANSTEMHVLRP--V 758
                   |:.|           .|::::::..|:|::|....:.|:: :.:......||:..  |
 Frog   794 APASTKEVLSNDKLEAYLLNNKMYEKYSLSCMDLQIMVGHVKDNWKH-MHDVEVGPAHVVEKFNV 857

  Fly   759 SLKVTAALCVVDNDPRLPNIKVDIDLPAILVNVSEDRIFLAIKVATSIPLPE------------- 810
            .|::...| :..:||..|...:...||.:.::|:|::|....:..|.:...|             
 Frog   858 LLQLQRRL-MYTSDPNYPGAILSGTLPDLKIHVNEEKISALQRCFTRLTNSETKPSDNTLRKEKI 921

  Fly   811 --QKEPASRLTQTNSRSSMSI----------------------SNFINKEVKKIGPSAS-----G 846
              ::|.:.||..:....:.||                      .|::...|:..|...|     |
 Frog   922 FNERENSGRLQDSVMNLTQSIVTLEQHTREVLVESHLLLAEFKINYMQLGVESCGQYISVLKVFG 986

  Fly   847 SSAS--KDP-------------LLDEIIQYTS-LDV------NFSLGEINFVLFQSSRKCETSP- 888
            |:|.  |.|             ::|.:..|.| .|:      |.|.......|.:|..:...|| 
 Frog   987 SNAHFLKRPYDAEVTLTVHGLLMVDTMQTYGSDFDLLMASHKNLSFDAPTGSLRESRAQSPVSPV 1051

  Fly   889 -----------------------------------------------DVSIEFLTPDGDVLPSQL 906
                                                           |.|::.:|...:.|...|
 Frog  1052 SEANDFAQPNTGVFKDKYNCSENLKDQESLIKIEYQFVSSECPSMNLDSSLQVMTVQVNNLDIIL 1116

  Fly   907 T-ENIQEPIEELPPTPPQQILSIDIRRLEAHFVS---------KTYE------------------ 943
            . |.|.|.|..|..:.|::.:.:..:.|::.|.|         .|||                  
 Frog  1117 NPETIVELISFLQKSFPKENVEVSPQPLKSEFESNILEQETFQSTYEQNTHIAVEIHRLNILLFR 1181

  Fly   944 ------------SVATVKLG------------DIN----------LRQ----------------Y 958
                        .:||..:|            |||          |.|                |
 Frog  1182 TVALPVGENCARKIATASIGGTKVNVCLGSKFDINGSLGCLQLMDLTQDAANSQYVISIGSTSSY 1246

  Fly   959 DCQDSD-----------------MDVLDVIYTPK------------------------------- 975
            |.|.|:                 ||.|...:|..                               
 Frog  1247 DNQASNVEAFECMFDRNLFNSIPMDALSFTFTEHSKEEFNLNLKMASLHYNHSAKFLKELTLSMD 1311

  Fly   976 --QENSSNYLFT----VSCTIADK--------------------------------SSPEFST-- 1000
              ::|..|.|.|    ||..:.:|                                |||:..|  
 Frog  1312 ELEDNFQNMLKTAASKVSSVLVNKTAEYSEMVSLFETPRKHRDSSQYEEEYDGLNASSPKMDTVK 1376

  Fly  1001 -----KYNS------------------TEQLVVANF--------------EVLQIVLHQ------ 1022
                 |..|                  ..|:.:.||              |:..|.|:.      
 Frog  1377 LILNIKIESPVVSIPRSPGNPELLVGHLGQIFIQNFVSDDDLSRSDKLQVEIKDIKLYSLNSSHI 1441

  Fly  1023 -------------------------------------ECLQR----------------------- 1027
                                                 |.|.:                       
 Frog  1442 SGRKEPRSARREQHNPPNIHTSVSSQEETHFTRQDFFESLHKNEAFHILQNTSIQFKMEKFALEP 1506

  Fly  1028 -----------------IMEVVNNFQRNLDLVL-------------------------------- 1043
                             |:::..||..::.:||                                
 Frog  1507 ENELSFCYNDESLEVGSILKIEGNFVNHVQVVLAKHVYEQVLQTLDNLVYSEDVNKLEQSTPCTP 1571

  Fly  1044 -------SSTRPRDRMGSIG-----GGDGIKRTLN------------------------------ 1066
                   |:.:..:.:|.:.     ...|:|.:.|                              
 Frog  1572 KQDSPTSSAFKSPETLGELKESMLLNTSGLKLSANRSLSTQQSSPFTQIQANFHISELQIQLSGD 1636

  Fly  1067 ------------------------------------VILED------------------------ 1071
                                                :::||                        
 Frog  1637 LTLGSQGLVSLKFQEFDIQFNKDHPQTLAIQVALRSLLMEDLLEKNPDSKYKNLMVSRGAPKPSS 1701

  Fly  1072 -----------------------------TEEIMTTDQMKRR----------------------- 1084
                                         .||.....|:.:|                       
 Frog  1702 LAHKEYLSQSCPSVSHIEYPDMPRSLPSHMEEATNVFQLYQRPTCPPRKKQNGEQDSEYPSTPPP 1766

  Fly  1085 -----------------------------KK--------------------------TRRTHVV- 1093
                                         ||                          |.:|.|| 
 Frog  1767 SPTSQRSKTSFAKENFDDSLVHINVFLVDKKHPEFSSLYKRINRSVDVDFNCLDILITLQTWVVI 1831

  Fly  1094 --------------------------------------ETVKVRVIANLDQVGLVLTGRKRPIAE 1120
                                                  |....::...:..:.|||...:..:|:
 Frog  1832 LDFFGIGSTADNHAVKQQPSDTRQAPKSETNMPLVSEKEHTNTKLDLKVHSLSLVLKNTRSELAK 1896

  Fly  1121 MNVKKFVSSLIIKSSYTEVNIGLK-DIQVLDLNPYTIHKNI----LSIVGKDAFNCQIVIYNKEE 1180
            .||.|..|.|    ...|.::.|: .|..|.|:..|:|..:    .:..|::|....|..|...:
 Frog  1897 ANVSKLTSYL----EMIEGDLALQGSIGSLSLSDLTVHGEVYTERFTTKGEEALIFYIFKYGLPD 1957

  Fly  1181 TQDYNSDDMKITVDIGCMKIIFLNWFVAGVMNFLNNFTAAQATIS-QAGAAAAESARQKAMDAYE 1244
            .......||::::.:..::.:....|.|.::.|:.:||..|..:. |..|...::.|.:|    :
 Frog  1958 LALKREYDMRVSLRMASVQYVHTQRFQAELVAFIQHFTQLQDVLGRQRAAIQGQTVRNQA----Q 2018

  Fly  1245 TATRMKLNIRIKAPIIIVPIGSQDRNALLLDLGLLELTNNTVEVAVAE----------------- 1292
            .::|:.|:|...||::::|..|.....::.:||.|.:.|..:.....|                 
 Frog  2019 RSSRILLDIEAGAPVLLIPESSWSSKLIVANLGKLRVRNKFLFAGTPETFSLKDKSLVKPTSAFI 2083

  Fly  1293 ------------------------------------------------------------EERLA 1297
                                                                        ||.:.
 Frog  2084 TPEHKTPKKTTEEKSKREWASKEGLFMGFVSENKREMGFNADLNESQHLSVPDKDLQGNPEEHIC 2148

  Fly  1298 VID--EIKLQICDVKISKIVLLDGNESTVDEVDAEVGFLSKF-----NMMNPMSC--TLSITRNL 1353
            ::|  .:.||..|:..::...:|..|. .|:..|::.|.|.|     ..:....|  .|.:.|||
 Frog  2149 LLDCIIVDLQDMDIFAAERFSMDFREG-FDDFRADLIFPSYFVRQVGGSLLTERCRMKLQLERNL 2212

  Fly  1354 SYTWYRDVPELNLSGRLKSIELTLFADDYALVMLVLNRNLNEGLEEFPPSEEAPQEAQVRPERRN 1418
            .......||:|::.|.|.|:..:|...||.|:..:|..||.|.:|:|    ..|.:.| .|:...
 Frog  2213 DKEISHAVPDLSIHGNLSSVHCSLDLSDYKLIRGLLENNLGEPVEDF----MRPYDLQ-DPKIHT 2272

  Fly  1419 SRAGRLSRTVQVSPIREKIHESIKFNFQFDGVVINLMEGEGA-----GLARFGIYFLSVKGTKLD 1478
            ..:|             .::.|:.|......|.:.|:|.:|.     .||||.............
 Frog  2273 VLSG-------------DVYTSVSFLIDMINVSLELLEEKGKDGLNNSLARFDFKKSKFLFESFS 2324

  Fly  1479 NGTLSTSVVLCNIQMDDMRSNSKSQIRQYLSRKDWVQPKLDTDEII----DACYNERNFMVDVTA 1539
            |.|.|.::|..::...|.|         :..:|.....|.:....|    ....|..:..:::..
 Frog  2325 NQTKSINLVSHSMMAYDTR---------FAGQKPLAAHKPNVFNCILQPAKTSSNPGSLQIELHH 2380

  Fly  1540 IIKEDDTFAEVRVRGFDLIVCIDFLLKLTTFLTLPPEENPRESVYIKPAPVSETARDTKHSIRSS 1604
            ...:|.:...|.:....:.:..|:|:.:..||..|.|.  ::.|:      |.::.:.|.|..|.
 Frog  2381 RSTKDTSCFTVVLNNLRVFLIFDWLMLVHKFLQTPAES--KKHVH------SSSSEEQKPSNASP 2437

  Fly  1605 AI--LAAQELVPVESSSHEVPNRKMNLILHIDEPDIILVENLEDLNTSCIIFNAQVHLNYRSIND 1667
            .|  .....:|...||...:|.:::.:.:::...:.::||::...:|:.||......|.|:....
 Frog  2438 VIPKTVKSGVVTKRSSVQIIPEKQLEVKINVTGTEFVVVEDMSSCDTNAIILKGTTVLTYKPKLA 2502

  Fly  1668 KQIVNGQIDALKMYMCAFLPERREMTRHYILHP--CVISLQGSTPEEE----------------- 1713
            .:..:|.:..::::.|....|..  |...|:.|  ..|.|.|::..:.                 
 Frog  2503 DRPFSGSLFGIEVFSCRVGNELD--TALSIIDPVHIQIDLVGNSAYQNSSGLMDAFNTEDFPPIL 2565

  Fly  1714 -----GMHISLKLSDIII-------------------------------------NVSPA----- 1731
                 .:.|.|..:|:.:                                     |.:||     
 Frog  2566 EIQLPALDIRLSYNDVQLFLAIAKSIPKQASASGAESAVQDVEPVPSNSPGSVKENENPALGSRD 2630

  Fly  1732 ----------------------TIELLNKAMLSVSSGTMTKCAI-----AEESR-NYSNLWHQHH 1768
                                  :::...||:|: |.|.:.|.|.     ||..: :.||   :::
 Frog  2631 TQRHSMDPLLKIHLEKLQELGFSLDDCRKALLA-SQGQLNKAATWLFKNAEPLKPSVSN---RNN 2691

  Fly  1769 FHSRTYWFTKVEQGVDALEAEQRSVSTDNEKQKTEKCVIEIPSITLVIESGVGYYTKPLISLDTR 1833
            ..:...|.:.||     |:||...|           |.|:.     .::..|     ||..|...
 Frog  2692 GAASLQWISGVE-----LKAESVCV-----------CFIDD-----CMDCDV-----PLAELTFS 2730

  Fly  1834 ITAVFNNWSRSLTAHGSLTLNMNYYNQALAEWEPIIELNEVIGRNGVREYTPW------------ 1886
            ..:.|.:...:........|:.:|||:.|:.|||.||              ||            
 Frog  2731 RLSYFQHLVSNPKGFAEFILSGDYYNRELSGWEPFIE--------------PWPCSLSWQQQEAS 2781

  Fly  1887 -----ELKFEMGMEKV-----------------QSELEDDAEQQAMHMNIHSAETLEITLSKTCL 1929
                 .||.||..:::                 ::.|.|..:|:.......|.|.:..::...||
 Frog  2782 RLHPSRLKLEMKAKQLLDINITSVLIDQYISTKEAWLADYCKQEKECEIDTSEEWMGSSVDPPCL 2846

  Fly  1930 GLLSELA---------------EAFSQAIDQNGLTKPDIVAPYVLENDTGFDVNLNLRKGIFTLH 1979
            |....||               :.:::|..:....:...| |:.|.|.||           .||.
 Frog  2847 GPSRPLAYLRTRSTASLTNLEHQVYARAEVKTPKRRQPFV-PFALRNHTG-----------CTLW 2899

  Fly  1980 EVHRGGTPVGANSTLLMVAQSEEVDPSVIKTCTIST-----------GGRAYLQTKDLSTLSEED 2033
            ......||..|   .|..:.|.||.|...|.....|           |.....:.:....|....
 Frog  2900 FATLTTTPTRA---ALSHSGSPEVVPDGDKNLIDDTHNVSQWREVLPGQEIPFEFETREKLRHRH 2961

  Fly  2034 SEDYTLY--------------VTIGDI--------------NKEIALPVSKSD----TRFFNLMR 2066
            :.|..::              |::..:              :..:..|:||::    ..:|:.: 
 Frog  2962 THDLRIHQLQVRVSGWEPISPVSVDKVGIFFRYAAPDKNTSSSSVGSPISKTNIIHPQVYFSAL- 3025

  Fly  2067 STSHEPWGIISEVKQEYGTTK-VNIHGVVSVHNHFTTGLNIYRRNP-APTAQCFEDIFVGRVRPG 2129
                .|..::..|..|....| |.|...:.|.|.....:.:...:| ||.    :.:.:..|.||
 Frog  3026 ----PPVRVVFAVTMEGSARKVVTIRSSLMVKNKLEIPMELRLDSPSAPD----KPVILPAVMPG 3082

  Fly  2130 EVFHVPLHAIYAESKDLFFSMRGYRRSVQGISWASNP-------------SDLNYSHQLHCDPTN 2181
            |.|.:|||   ..|..|....||     .|:.:...|             |.....|.:..:.:.
 Frog  3083 ESFAIPLH---LTSWRLQARPRG-----MGVFFCKAPIHWTNVNKAGEVSSSKRECHSMDAEISR 3139

  Fly  2182 TFEPLIMNARRSKSEVY--------FENTNKYTLLSAFYTIHLRPPLYLRNSLPINIQVSVAGCS 2238
            .|...:    ..|.:.|        |.::.|.......:||.|.|.:.:.|.||..:...|.|..
 Frog  3140 YFRFCV----AIKKDNYPDYVPSNIFSDSAKQIYRQPGHTIFLLPTVVICNLLPCELNFYVKGLP 3200

  Fly  2239 VR------KEDGL-DAQSSQRFVDRGYRKEDFLDYGEKPVNSGDVLHLPTVRLASKGKESKSFLV 2296
            ::      :|..| .|.:||.| :.|...|:|....|..:..|...::..:||            
 Frog  3201 IKGTLKPGREMALHTADTSQNF-ELGVCLENFQHCKELLIPPGTQNYMVRMRL------------ 3252

  Fly  2297 VRLVQYLEKDWSCATEIWDYTDDVITWTFSSYDSEMKVDMDLYVKTENR-HGSLMLTLFSPFWMI 2360
                                           ||...:: ::|.::...| .|||.:.:.:|:|:|
 Frog  3253 -------------------------------YDGHKRL-LNLTIRIACRAEGSLKIFVSAPYWLI 3285

  Fly  2361 NKTGMMLTYKSETTSVEVLYHPPEYS-----GPILFTFRDKLFFDKKKASIRIDNGQWSEKIP-- 2418
            ||||:.|.::.:.:..:......|:.     .|:||.:.||..  ....::||..|...|.||  
 Frog  3286 NKTGLPLIFRQDNSKTDAAGQFEEHELARSLSPLLFCYADKEL--PNLCTMRIGRGIHPEGIPGW 3348

  Fly  2419 -----LDVAGSVGEVICFANNQK----YPVGVHNHLTQNSL--TKQITFIPFYIVCNKCHFDIEL 2472
                 ||....|..:.......:    |.:|:.....:...  |..:||.|.|::.||..:.:..
 Frog  3349 CQGFSLDGGSGVRALKVIQQGNRPGLIYNIGIDVKKGRGKYRDTCMVTFAPRYLLINKSTYKLAF 3413

  Fly  2473 --------QEQSRPADPWLHLEPNEMEPLWPRNDTKNNLVVRVDGKITPAFDFTEVICTLLKLED 2529
                    |..:.|......|..:.:...|||||....|.||:       .|....:.: ...|.
 Frog  3414 AQREFARGQGTNNPVGYISTLPGSSVVFHWPRNDYDQLLCVRL-------MDLPNCVWS-GGFEV 3470

  Fly  2530 SKYGGINVDVQTTEGGVY--------------ITFTDYKPADAPGLLINHTGKQIVYHEKGTKNE 2580
            :|....:::::.|.|..:              |:||:......|..:.|.:...:|:.:.|..:.
 Frog  3471 NKNNSFHINMRDTLGKCFFLRVEITLQSATYRISFTNTDQLPPPFRIDNFSKVPVVFVQHGVADP 3535

  Fly  2581 HI---LNAKSTIMYAWDDPTGPKMLVFGTNKEETDLKRDGIGEVI-----MQDGGKVLWVSFL-- 2635
            .:   :.:.:::.||.|:||.|..:.       ..:|..|..|:.     .||..::.:.:|:  
 Frog  3536 RLRTEVKSATSMDYALDEPTLPSYIA-------VTVKGAGSSEITCNMNDFQDSKQLYYENFIYI 3593

  Fly  2636 ----------DGLQRVLLFTENESIA--------------------------------------- 2651
                      :|  .|.|..:|.||.                                       
 Frog  3594 AASYTFSGSSEG--NVRLGGQNPSITNAELVLDVHPKTLRVVLKKKEPGKRSQLWRMTGTGMLCH 3656

  Fly  2652 ---------NRTESTASL------------------------------QSITQS-------IDLR 2670
                     |:.:||.||                              :|.||:       :...
 Frog  3657 EGSSAPHNPNKPQSTRSLDSSLVLDIAGLAAVTDNKYEPLMLRKPDHRRSTTQTWCFRDGKLTCS 3721

  Fly  2671 IHGIGLSVINNETG--------------LDIL--------YL--------GVTSSGIIWESK--- 2702
            :||:.:...|..:|              ||:|        ::        ||.|..:|.:..   
 Frog  3722 LHGLVVQARNGTSGLYDGAEVVLGPDASLDLLGSVPKEQQFINQKMRPGSGVLSVRVIPDGPTRV 3786

  Fly  2703 -KVT------KNRFKELTINE-NALLEIEYQKYLVHKSVNDVQT---------YKLDNKFPIDFD 2750
             ::|      .|||.    || ..|.|:|.:||...:...:::.         ..|.||.|.:..
 Frog  3787 LQITDLSQRRSNRFS----NEIEELAELELRKYKNPEVKQEIEVLVKLQDGIGISLVNKVPEELV 3847

  Fly  2751 LMILKKTVERNLRRSFYPAIWLSRKSSPFQSQLHVKINRIQVDNQFLDPIFPVVLAPIPPPKSVA 2815
            .:.|.             .|.:..........|.:.:..:|||||.:....|.:|  ...|.|:.
 Frog  3848 FVSLS-------------GINIHYTHLTVNQVLELSVQNVQVDNQLIGTTQPTML--FVTPSSIE 3897

  Fly  2816 STTSLKPFIECSMVQRIMPNSTVRQFKYARILIQEFLFKVDLNFLTAIAEMFAKEVSDEAAAKQF 2880
            |...:.|.|:.|.:.....|.....||:..|..|:|..:::...|..:...|..:.| |...:::
 Frog  3898 SEEEIGPAIQVSAMMVPSKNKLSTLFKHLLIKAQKFTVQIEEKLLLKLLSYFGFDQS-ETGVEKW 3961

  Fly  2881 RQDVESIELPLSAFFEEHSLEEQKSFYDNLHLGPLKIHVSFSMAGSDTKALPGFLGSLVQGVGVT 2945
            .:::.  :.|     .|.:..:|:.:::||.:...:|.:|...:..    ||..|.:|...:|..
 Frog  3962 DENIH--DKP-----SEENKSQQRYYFENLKISIPQIKLSVFTSNK----LPPDLKALKSTLGFP 4015

  Fly  2946 LTDVNDVVFRLAFFEREYQFFSQKQLINEITSHYTGQALKQLYVLVLGLDVLGNPYGLVVGLKKG 3010
            |....|.|..|..|.:.:.:.:|:.:||:|..|:..:.|.|...::..:|.||||.||:..:.:|
 Frog  4016 LIKFEDAVIDLDPFAKVHPYETQEFIINDIIKHFQEELLSQAAKILGSVDFLGNPMGLLNDVSEG 4080

  Fly  3011 VEDLFYEPFQGAIQGPGEFAEGLVL--GVKSLFGHTVGGAAGAVSKITGAMGKGLAALTFDEDYQ 3073
            |                   .||:.  .|..|..:...|.:.:.:|..|.:..||.. |.|..:|
 Frog  4081 V-------------------TGLIKYGNVGGLIRNVTHGVSNSAAKFAGTLSDGLGK-TMDNRHQ 4125

  Fly  3074 KKRRQGIQNKPKNFHEGLARSSKGLVMGFVDGVTGVVTKPVTGAR-DNGVEGFFKGLGKGAIGLV 3137
            .: |:.|:.......|.|.....||..|.:.|:|.|:|..|.|.: :.||.||..|.|||.:|.|
 Frog  4126 TE-REYIRYHAATSGEHLVAGIHGLAHGIIGGLTSVITSTVEGVKTEGGVSGFISGFGKGLVGTV 4189

  Fly  3138 ARPTAGVVDFASGSFEAVKRAADAS---EDVKRMRPPRFQHYDFVLRPYCLMEATG-----NKIM 3194
            .:|.||.:||||.:.:||:..|..|   ..|:|:|.||           |.....|     ::|.
 Frog  4190 TKPVAGALDFASETAQAVRDTATLSGHRMQVQRIRKPR-----------CCTSPQGLLPRYSEIQ 4243

  Fly  3195 KETDKGKFATTDN-----FIHCEEIIQKSEYLVVTNYRVM-------YVQRNEMF 3237
            .|..:..|..|||     ||..|.|   ..|.|:.:.:.:       ||.|:.:|
 Frog  4244 AEGQEQLFRLTDNIQDEFFIAVEHI---DSYCVLISSKAVYFLKWGDYVDRDAIF 4295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps13NP_001260781.1 Chorein_N 4..113 CDD:315323 37/108 (34%)
VPS13 140..370 CDD:318996 62/244 (25%)
VPS13_mid_rpt 574..807 CDD:318998 61/299 (20%)
SHR-BD 2349..2600 CDD:310922 61/293 (21%)
VPS13 <2701..3232 CDD:330393 140/573 (24%)
VPS13_C 2904..3074 CDD:318997 41/171 (24%)
vps13dXP_012822629.1 MRS6 1..>1143 CDD:227376 257/1195 (22%)
VPS13 139..354 CDD:374880 60/240 (25%)
MRS6 <2429..>3100 CDD:227376 129/743 (17%)
UBA_VP13D 2644..2679 CDD:270491 7/35 (20%)
SHR-BD 3274..3557 CDD:369020 61/292 (21%)
MRS6 <3833..4294 CDD:227376 131/522 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D4159at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.