Sequence 1: | NP_001260781.1 | Gene: | Vps13 / 35693 | FlyBaseID: | FBgn0033194 | Length: | 3321 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031746767.1 | Gene: | vps13a / 100488998 | XenbaseID: | XB-GENE-989613 | Length: | 3186 | Species: | Xenopus tropicalis |
Alignment Length: | 3432 | Identity: | 1060/3432 - (30%) |
---|---|---|---|
Similarity: | 1747/3432 - (50%) | Gaps: | 386/3432 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MVFEAVVADVLNKVLGDYIENLDRNQLKIGIWGGDVVLQNLKIRENALDELDLPVQLIYGYLGKL 65
Fly 66 VLKIPWKNLYSQPVIVNIEDLYVLVSPNNNVQYNAEKEAKYEMDLKKAALDALEAARKKELEMDQ 130
Fly 131 PKADA--GFAEKLTAQIVNNLQVQITNVHLRYEDTTTTGS-PFSFGISLHELELYTTDCDWEKCY 192
Fly 193 MAQQASQVFKIANLSCLSAYLNCGGQLYANNKSDLSQQ-FKTNIACKETKP-NYNYVLGPISCNA 255
Fly 256 KLKLNMNPELDDPPFEKPKIDLTLEMEKLNVGLTNTQFDNLMKLGDAMNRQQLGIPYRKYRPYNI 320
Fly 321 PYKGHARDWWHFAITSILEEEVRKPRESWTWGHIKTHRERCNTYAQKYKEQCLSKKPSAVLTETC 385
Fly 386 RLLETELDVFNLLLIRQRVNIEIAKQREAV--PEQK------SGWFSG-WGWGG--GAKKDDQTT 439
Fly 440 SQKLVEKFEAAMTSEEKEKMYRAIGYQENAKPTDLPESYEAIRMNFKLIALEVGLYKDERNSSAA 504
Fly 505 TKDFHELPSLVLLNFSMA--TALITQRPAAEAISIIAGMREIKVTGLTRNDYTPLLVESK--ITD 565
Fly 566 EFNLLEVFFETNPLDKLCDQRVKVVARPLQITYDAPTILALINAFQTPGDVTLSKFEDAASTKIS 630
Fly 631 NFKERSATGMQYMIDKKAVLDVDILLMPNILVVPHKGVYDAGNVSLLVVSMGQVHLSSQPRRESN 695
Fly 696 KLQHLFSAGEDKDEILKTVMENAYDRFTVAVDDVQMLVVRAGEPWQNALAEANSTEMHVLRPVSL 760
Fly 761 KVTAALCVVDNDPRLPNIKVDIDLPAILVNVSEDRIFLAIKVATSIPLPEQ-KEPASRLTQTNSR 824
Fly 825 SSMSISN----------------FINKE--------------VKKIGPSASGSSASKDPLLDEII 859
Fly 860 QYTSLDVNFSLGEINFVLFQSSRKCETSPDVSIEFLTPDGDVLPSQLTENIQEPIEELPPTPPQQ 924
Fly 925 ILSIDIRRLEAHFVSKTYESVATVKLGDINLRQYDCQDSDMDVLDVIYTPKQENSSNYLFTVSCT 989
Fly 990 IADKSSPEFSTKYNSTEQLVVANFEVLQIVLHQECLQRIMEVVNNFQRNLDLVLSSTRPRDRMGS 1054
Fly 1055 IGGGDGIKRTLNVILEDTEEIMTTDQMKRRKKT--RRTHVVETVKVRVIANLDQVGLVLTGRKRP 1117
Fly 1118 IAEMNVKKFVSSLIIKSSYTEVNIGLKDIQVLDLNPYTIHKNILSIVGKDAFNCQIVIY----NK 1178
Fly 1179 EETQDYNSDDMKITVDIGCMKIIFLNWFVAGVMNFLNNFTAAQATISQAGAAAAESARQKAMDAY 1243
Fly 1244 ETATRMKLNIRIKAPIIIVPIGSQDRNALLLDLGLLELTNN-TVEVAVAEEERLAVIDEIKLQIC 1307
Fly 1308 DVKISKIVLLDGNESTVDEVDAEVGFLSKFNMMNPMSCTLSITRNLSYTWYRDVPELNLSGRLKS 1372
Fly 1373 IELTLFADDYALVMLVLNRNLNEGLEEFPPSEEAPQEAQVRPERRNSR-AGRLSRTVQV----SP 1432
Fly 1433 IREKIHESIKFNFQFDGVVINLMEGE-------------GAGLARFGIYFLSVKGTKLDNGTLST 1484
Fly 1485 SVVLCNIQMDDMRSNSKSQIRQYLSRKDWVQPKLDTDEIIDACYNERNFMVDVTAIIKEDDTFAE 1549
Fly 1550 VRVRGFDLIVCIDFLLKLTTFLTLPPEENPRESVYIK--PAPVSETARDTKHSIRSSAILAAQEL 1612
Fly 1613 VPVESSSHEVPNRKMNLILHIDEPDIILVENLEDLNTSCIIFNAQVHLNYRSINDKQIVNGQIDA 1677
Fly 1678 LKMYMCAFLPERREMTRHYILHPCVISLQGSTPEEEGMHISLKLSDIIINVSPATIELLNKAMLS 1742
Fly 1743 VSSGTMTKCAIAEESRNYS-NLWHQHHFHSRTYWFTKVEQGVDALEAEQRSVSTDNEKQKTEKCV 1806
Fly 1807 IEIPSITLVIESGVGYYTKPLISLDTRITAVFNNWSRSLTAHGSLTLNMNYYNQALAEWEPIIEL 1871
Fly 1872 NEVIGRNGVREYTPWELKFEMGMEKVQSELEDDAEQQ-------AMHMNIHSAETLEITLSKTCL 1929
Fly 1930 GLLSELAEAFSQA---------IDQNGLTKPDIVAPYVLENDTGFDVNLNLRKGIFTLHEVHRGG 1985
Fly 1986 TPVGANSTLLMVAQSEEVDPSVIKTCTISTGGRAYLQTKDLSTLSEEDSEDYTLYVTIGDINKEI 2050
Fly 2051 ALPVSKSDTRFFNLMRSTSHEPWGIISEVKQEYGTTKVNIHGVVSVHNHFTTGLNIYRRNPAPTA 2115
Fly 2116 QCFEDIFVGRVRPGEVFHVPLHAIYAESKDLFF---SMRGYRRSVQGISWASNPSDLNYSHQLHC 2177
Fly 2178 -DPTNTFEPLIMNARRSKSEVY-FENTNKYTLLSAFYTIHLRPPLYLRNSLPINIQVSVAGCSVR 2240
Fly 2241 K---EDGLDAQSSQRFVDRGYRKEDFLDYGEKPVNSGDVLHLPTVRLASKGKESKSFLVVRLVQY 2302
Fly 2303 LEKDWSCATEIWDYTDDVITWTFSSYDSEMKVDMDLYVKTENRHGSLMLTLFSPFWMINKTGMML 2367
Fly 2368 TYKSETTSVEVLYHPPEYSGPILFTFRDKLFFDKKKASIRIDNGQWSEKIPLDVAGSVGEVICFA 2432
Fly 2433 NNQKYPVGVHNHLTQNSLTKQITFIPFYIVCNKCHFDIELQEQSRPADPWLHLEPNEMEPLWPRN 2497
Fly 2498 DTKNNLVVRVDG-KITP--AFDFTEVICTLLKLEDSKYGGINVDVQTTEGGVYITFTDYKPADAP 2559
Fly 2560 GLLINHTGKQIVYHEKGTKNEH--ILNAKSTIMYAWDDPTGPKMLVFGTNKEETDLKR--DGIGE 2620
Fly 2621 VIMQDGGKVLWVSFLDGLQRVLLFTENESIANRTESTASLQSITQSIDLRIHGIGLSVINNETGL 2685
Fly 2686 DILYLGVTSSGIIWESKKVTKNRFKELTINENALLEIEYQKYLVHKSVNDVQTYKLDNKFPI--- 2747
Fly 2748 -DFDLMILKKTVERNLRRSFYPAIWLSRKSSPFQSQLHVKINRIQVDNQFLDPIFPVVLAPIPPP 2811
Fly 2812 KSVASTTSLKPFIECSMVQRIMPNSTVRQFKYARILIQEFLFKVDLNFLTAIAEMFAK--EVSDE 2874
Fly 2875 AAAKQFRQDVESIELPLSAFFEEHSLEEQKSFYDNLHLGPLKIHVSFSMAGS---------DTKA 2930
Fly 2931 LP-GFLGSLVQGVGVTLTDVNDVVFRLAFFEREYQFFSQKQLINEITSHYTGQALKQLYVLVLGL 2994
Fly 2995 DVLGNPYGLVVGLKKGVEDLFYEPFQGAIQGPGEFAEGLVLGVKSLFGHTVGGAAGAVSKITGAM 3059
Fly 3060 GKGLAALTFDEDYQKKRRQGIQNKPKNFHEGLARSSKGLVMGFVDGVTGVVTKPVTGARDNGVEG 3124
Fly 3125 FFKGLGKGAIGLVARPTAGVVDFASGSFEAVKRAADASEDVKRMRPPRFQHYDFVLRPYCLMEAT 3189
Fly 3190 GNKIMKETDKGKFATTDNFIHCEEIIQKSEYLVVTNYRVMYVQRNEMFGVWTSLWSYLWNEISSV 3254
Fly 3255 AATARGVQFTVKTDGKKVLGLFSSKE--------SPR--KLVLVADERKRDA 3296 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13 | NP_001260781.1 | Chorein_N | 4..113 | CDD:315323 | 59/108 (55%) |
VPS13 | 140..370 | CDD:318996 | 82/232 (35%) | ||
VPS13_mid_rpt | 574..807 | CDD:318998 | 78/232 (34%) | ||
SHR-BD | 2349..2600 | CDD:310922 | 86/255 (34%) | ||
VPS13 | <2701..3232 | CDD:330393 | 237/546 (43%) | ||
VPS13_C | 2904..3074 | CDD:318997 | 96/179 (54%) | ||
vps13a | XP_031746767.1 | MRS6 | 4..>2076 | CDD:227376 | 640/2266 (28%) |
SHR-BD | 2220..2468 | CDD:399561 | 86/254 (34%) | ||
MRS6 | <2642..3110 | CDD:227376 | 214/471 (45%) | ||
VPS13_C | 2777..2954 | CDD:407143 | 95/176 (54%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 212 | 1.000 | Domainoid score | I2722 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H22068 | |
Inparanoid | 1 | 1.050 | 1542 | 1.000 | Inparanoid score | I93 |
OMA | 1 | 1.010 | - | - | QHG54975 | |
OrthoDB | 1 | 1.010 | - | - | D4159at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001282 | |
OrthoInspector | 1 | 1.000 | - | - | otm48531 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 1 | 1.000 | - | - | X990 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
11 | 11.010 |