DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpe and SPAC31G5.05c

DIOPT Version :9

Sequence 1:NP_001260780.1 Gene:Rpe / 35692 FlyBaseID:FBgn0050499 Length:221 Species:Drosophila melanogaster
Sequence 2:NP_594005.1 Gene:SPAC31G5.05c / 2543174 PomBaseID:SPAC31G5.05c Length:228 Species:Schizosaccharomyces pombe


Alignment Length:216 Identity:108/216 - (50%)
Similarity:149/216 - (68%) Gaps:2/216 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VQAKIGPSILNADLSNLAAESQKLLDNGADYLHLDVMDGTFVPNLTFGHPMVKSLRNKI--KTAF 65
            |||||.||:|..|.:||..|..::|..|:|:||:||||..||||||.|..:||::||..  :.||
pombe     2 VQAKIAPSLLAGDFANLEKEVGRMLKYGSDWLHVDVMDAQFVPNLTIGPIVVKAMRNHYTKEEAF 66

  Fly    66 FETHMMVQNPEQWIEPMADAGVNLYTFHVEPVQDVVRVSRRVQESGMKVGLAIKPGTEVQDLEKY 130
            |:.|:||..||::|:.:||||.:|:.||.|..:....:..|..|.||.||.|:||.|.|:.:..:
pombe    67 FDCHLMVIEPERYIDQLADAGASLFCFHYEATEKHEEIISRAHEKGMLVGCALKPKTPVEVILPF 131

  Fly   131 LSIADVVLVMTVEPGFGGQSFMADMMPKVKWLRENYPNLDIEVDGGVGPKTIHCCAEAGANMIVS 195
            :...|:|||||||||.||||||.:.:|||::||:.||.|::|||||:..||:...|:||||:||:
pombe   132 VEKLDMVLVMTVEPGKGGQSFMPECLPKVEFLRKKYPTLNVEVDGGLSLKTVDAAADAGANVIVA 196

  Fly   196 GTAVVGASDQSQVIKELRDVV 216
            ||||..|....:||..||:.|
pombe   197 GTAVFHAQSPEEVISGLRNSV 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpeNP_001260780.1 RPE 6..213 CDD:238244 102/208 (49%)
SPAC31G5.05cNP_594005.1 RPE 5..214 CDD:238244 102/208 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 198 1.000 Domainoid score I670
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12005
Inparanoid 1 1.050 211 1.000 Inparanoid score I950
OMA 1 1.010 - - QHG53606
OrthoFinder 1 1.000 - - FOG0002457
OrthoInspector 1 1.000 - - oto100644
orthoMCL 1 0.900 - - OOG6_100819
Panther 1 1.100 - - LDO PTHR11749
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1196
SonicParanoid 1 1.000 - - X1871
TreeFam 00.000 Not matched by this tool.
1212.000

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