DRSC/TRiP Functional Genomics Resources

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Protein Alignment Corin and Cd163

DIOPT Version :9

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_001163866.1 Gene:Cd163 / 93671 MGIID:2135946 Length:1159 Species:Mus musculus


Alignment Length:575 Identity:126/575 - (21%)
Similarity:185/575 - (32%) Gaps:192/575 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   879 NCKLFKDFPSSEDCV-GLDEVREVMRAATHPKCDG-----FQ------CDQNRCLPQEYVCDGHL 931
            ||...||  :...|. |.:....::.:|.| :|.|     ||      ||.|.......|....|
Mouse   138 NCTHEKD--AGVTCS
DGSNLEMRLVNSAGH-RCLGRVEIKFQGKWGTVCDDNFSKDHASVICKQL 199

  Fly   932 DC---MDQADEAKCERCGPDEIYCGDSQCIGT-------------KHICD-----GIIDCPYGQD 975
            .|   :..:..||. ..|...|:..|..|.|.             ||.||     |:| |..|.|
Mouse   200 GCGSAISFSGSAKL-GAGSGPIWLDDLACNGNESALWDCKHRGWGKHNCDHAEDVGVI-CL
EGAD 262

  Fly   976 ERNCLRLSERNGDVG----TGVLEVYRIGQRQWMPACVKNWDRAVSPSAVCSILGY-SAVNATSV 1035
                  ||.|..| |    :|.||| |. |.:|...|..|||.. ..|.||..||. :|::|   
Mouse   263 ------LSLRLVD-GVSRCSGRLEV-RF-QGEWGTVCDDNWDLR-DASVVCKQLGCPTAISA--- 314

  Fly  1036 LTQLTHRPLLATVNVST---DIWKMYAKRKSTLMQEFANCKKTEDYPMADLTCSN-----YECGR 1092
                     :..||.|.   .||                        :.:::|..     :||..
Mouse   315 ---------IGRVNASEGSGQIW------------------------LDNISCEGHEATLWECKH 346

  Fly  1093 VKRGRHKPSRRIIGGTQASPGNWPFLAAILGGPEKIFYCAGVLISDQWVLTASHCVGNYSVIDLE 1157
            .:.|:|....|...|...|.|....|..:.||..    |||::..:...||...|...:::.|.:
Mouse   347 QEWGKHYCHHREDAGVTCSDGADLELRLVGGGSR----CAGIVEVEIQKLTGKMCSRGWTLADAD 407

  Fly  1158 DWTIQLGVTRRNSFTYSGQKVKVKAVIPHPQYNMAIAHDNDIALFQL--------------ATRV 1208
            ....|||.   .|...:..|:..|....:........:.|:...:|.              ..:|
Mouse   408 VVCRQLGC---GSALQTQAKIYSKTGATNTWLFPGSCNGNETTFWQCKNWQWGGLSCDNFEEAKV 469

  Fly  1209 AFHEHLLP-----------------------VC-----LPPPSV--RNLHPGTLCTVIG------ 1237
            ....|..|                       ||     |...||  |.|..||:.:::|      
Mouse   470 TCSGHREPRLVGGEIPCSGRVEVKHGDVWGSVCDFDLSLEAASVVCRELQCGTVVSILGGAHFGE 534

  Fly  1238 -----WGKREDKDPKSTYEYIVNEVQVPIITRNQCDEWLDNLTVSEGMVCAGFDD----GGKDAC 1293
                 ||:........::..:.:  ..|.:.|. |....|   ||  :||:.:.|    ||:.:|
Mouse   535 GSGQIWGEEFQCSGDESHLSLCS--VAPPLDRT-CTHSRD---VS--VVCSRYIDIRLAGGESSC 591

  Fly  1294 QG-------DSGGPLLCPYPGEKNRWFVGGIVSWGIMCAHPRLPGVYANVVQYVP 1341
            :|       .:.|||...:              |.:..||.....:...|.|.:|
Mouse   592 EGRVELKTLGAWGPLCSSH--------------WDMEDAHVLCQQLKCGVAQSIP 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 5/15 (33%)
LDLa 911..942 CDD:238060 10/44 (23%)
LDLa 945..979 CDD:238060 14/51 (27%)
SR 980..>1034 CDD:214555 23/58 (40%)
SRCR 992..1086 CDD:278931 23/97 (24%)
Tryp_SPc 1103..1343 CDD:214473 59/305 (19%)
Tryp_SPc 1104..1346 CDD:238113 58/304 (19%)
Cd163NP_001163866.1 SR 50..150 CDD:214555 4/13 (31%)
SRCR 55..150 CDD:278931 4/13 (31%)
SR 157..258 CDD:214555 25/103 (24%)
SRCR 165..257 CDD:278931 24/94 (26%)
SR 265..365 CDD:214555 33/139 (24%)
SRCR 270..365 CDD:278931 31/133 (23%)
SR 372..472 CDD:214555 19/106 (18%)
SRCR 377..472 CDD:278931 18/101 (18%)
SR 478..577 CDD:214555 19/106 (18%)
SRCR 482..577 CDD:278931 19/102 (19%)
SR 582..682 CDD:214555 13/65 (20%)
SRCR 587..682 CDD:278931 12/60 (20%)
SR 719..819 CDD:214555
SRCR 724..819 CDD:278931
SRCR 835..926 CDD:278931
SR 930..1030 CDD:214555
SRCR 935..1029 CDD:278931
Internalization signal 1091..1094
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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