DRSC/TRiP Functional Genomics Resources

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Protein Alignment Corin and sfrp1b

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_001077040.1 Gene:sfrp1b / 798564 ZFINID:ZDB-GENE-061103-1 Length:300 Species:Danio rerio


Alignment Length:145 Identity:40/145 - (27%)
Similarity:59/145 - (40%) Gaps:12/145 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   753 FVNKTIINTIHVED----TTSFGKNPAPGTCLPIIVRFCQGPQIPYNYTVFPNYIGHFGQLETQT 813
            |:...::|.:..||    ..|..|:| |...:|..:|.|.  .:.|...:.||.:.|....|.:.
Zfish    15 FLCLPLLNALEDEDYIWPPDSSDKHP-PCVDIPEDLRLCF--NVGYGRMMLPNLLDHETIAEVKQ 76

  Fly   814 DLDSYEALVDVRCYELVSLFLCTLFVPKCGQSGATVPPCKTLCTETMRRCGFFFDVFGLSLPEYL 878
            ...|:..||...|::...:.||:||.|.|  ....:.||:..|......|......||...||.|
Zfish    77 QAVSWVPLVHKACHKGTQVLLCSLFAPVC--LDRPLYPCRWFCEAVRDSCAPIMQAFGFPWPEML 139

  Fly   879 NCKLFKDFPSSEDCV 893
            .|   ..||..|.|:
Zfish   140 RC---DKFPLGEVCI 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 32/116 (28%)
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113
sfrp1bNP_001077040.1 CRD_SFRP1 36..159 CDD:143552 35/124 (28%)
NTR_Sfrp1_like 170..292 CDD:239635
Blue background indicates that the domain is not in the aligned region.

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