DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and FZD3

DIOPT Version :9

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_059108.1 Gene:FZD3 / 7976 HGNCID:4041 Length:666 Species:Homo sapiens


Alignment Length:804 Identity:156/804 - (19%)
Similarity:246/804 - (30%) Gaps:306/804 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   745 FNAYPTIKFVNKTIINTIHVEDTTSFGKNPAPGTCLPIIVRFCQGPQIPYNYTVFPNYIGHFGQL 809
            |:.:|...|:.       |:...:.|       :|.||.:|.||  .:|||.|..||.:.|:.|.
Human     8 FSLWPLTVFMG-------HIGGHSLF-------SCEPITLRMCQ--DLPYNTTFMPNLLNHYDQQ 56

  Fly   810 ETQTDLDSYEALVDVRCYELVSLFLCTLFVPKCGQSGATVPPCKTLCTETMRRCGFFFDVFGLSL 874
            .....::.:..:|::.|......|||.|:.|.|.:.|....||:.||......|....::||:..
Human    57 TAALAMEPFHPMVNLDCSRDFRPFLCALYAPICMEYGRVTLPCRRLCQRAYSECSKLMEMFGVPW 121

  Fly   875 PEYLNCKLFKD----FPSSEDCVGLDEVREVMRAATHPKCDGFQCDQNRCLPQEYVCDGHLDCMD 935
            ||.:.|..|.|    :|...|.....|..|....|.. :..||.|      |:|...|       
Human   122 PEDMECSRFPDCDEPYPRLVDLNLAGEPTEGAPVAVQ-RDYGFWC------PRELKID------- 172

  Fly   936 QADEAKCERCGPDEIYCGDSQCIGTKHICDGIIDCP---YGQDERNCLRLSERNGDVGTGVLEVY 997
                       ||..|       ...|:.|....||   :.::|.:..|               |
Human   173 -----------PDLGY-------SFLHVRDCSPPCPNMYFRREELSFAR---------------Y 204

  Fly   998 RIGQRQWMPACVKNWDRAVSPSAVCSILGYSAVNAT--SVLTQLT-----HRPLLATVNVSTDIW 1055
            .||                    :.||:..||...|  :.|..:|     .||::.         
Human   205 FIG--------------------LISIICLSATLFTFLTFLIDVTRFRYPERPIIF--------- 240

  Fly  1056 KMYAKRKSTLMQEFANCKKTEDYPMADL------------TC-----SNYECGRVKRGRHKPSRR 1103
                         :|.|     |.|..|            .|     :.|:...|.:|.|..:..
Human   241 -------------YAVC-----YMMVSLIFFIGFLLEDRVACNASIPAQYKASTVTQGSHNKACT 287

  Fly  1104 II-----GGTQASPGNWP------FLAAI-LGGPEKIFYCAGVLISDQW--------VLTASH-- 1146
            ::     ..|.|....|.      ||||: ..|.|.|...|.:..:..|        :|.|.:  
Human   288 MLFMILYFFTMAGSVWWVILTITWFLAAVPKWGSEAIEKKALLFHASAWGIPGTLTIILLAMNKI 352

  Fly  1147 --------C-VGNYSV--------------------------IDLEDWTIQLGVTRRNS------ 1170
                    | ||.|.|                          |.|....|::.:.:.|.      
Human   353 EGDNISGVCFVGLYDVDALRYFVLAPLCLYVVVGVSLLLAGIISLNRVRIEIPLEKENQDKLVKF 417

  Fly  1171 ------FT-------------------YSG-------QKVKVKAVIPHPQYNMAIAHDNDIALFQ 1203
                  |:                   |.|       |:...:..||.| |.:......|:.||.
Human   418 MIRIGVFSILYLVPLLVVIGCYFYEQAYRGIWETTWIQERCREYHIPCP-YQVTQMSRPDLILFL 481

  Fly  1204 LATRVAFHEHLLPVCLPPPSVRNLHPGTLCTVIGW-----GKREDKDPKSTYEYIVNEVQ----- 1258
            :       ::|:.:.:..|||  ...|:..|...|     |:|:.:        ||||.:     
Human   482 M-------KYLMALIVGIPSV--FWVGSKKTCFEWASFFHGRRKKE--------IVNESRQVLQE 529

  Fly  1259 ------------VPIITRNQCDEWLDNLTVSEGMVCAGFDDGGKDACQGDSGGPL---LCPYPGE 1308
                        .|||.:::........|.:.....|..||      |....|.:   :..|.|.
Human   530 PDFAQSLLRDPNTPIIRKSRGTSTQGTSTHASSTQLAMVDD------QRSKAGSIHSKVSSYHGS 588

  Fly  1309 KNRWFVGGIVSWGIMCAHPRLPGVYANVVQYVP-WIQEQIAKHSRPIKEDRVNKYDLHPGGPDIL 1372
            .:|...|...           |..|..:.:.:| ....::..|||.....|:|:...|..    :
Human   589 LHRSRDGRYT-----------PCSYRGMEERLPHGSMSRLTDHSRHSSSHRLNEQSRHSS----I 638

  Fly  1373 SKIATDPMREGAPHHYTHSRTSSK 1396
            ..::.:||.     |.||..:.::
Human   639 RDLSNNPMT-----HITHGTSMNR 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 37/119 (31%)
LDLa 911..942 CDD:238060 6/30 (20%)
LDLa 945..979 CDD:238060 8/36 (22%)
SR 980..>1034 CDD:214555 9/55 (16%)
SRCR 992..1086 CDD:278931 18/117 (15%)
Tryp_SPc 1103..1343 CDD:214473 63/360 (18%)
Tryp_SPc 1104..1346 CDD:238113 63/362 (17%)
FZD3NP_059108.1 CRD_FZ3 24..150 CDD:143558 39/134 (29%)
7tmF_FZD3 192..512 CDD:320161 65/391 (17%)
TM helix 1 201..226 CDD:320161 9/59 (15%)
TM helix 2 235..256 CDD:320161 7/47 (15%)
TM helix 3 287..313 CDD:320161 3/25 (12%)
TM helix 4 330..352 CDD:320161 3/21 (14%)
TM helix 5 366..391 CDD:320161 2/24 (8%)
TM helix 6 419..444 CDD:320161 1/24 (4%)
TM helix 7 473..498 CDD:320161 7/33 (21%)
Lys-Thr-X-X-X-Trp motif, mediates interaction with the PDZ domain of Dvl family members. /evidence=ECO:0000250 502..507 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 538..666 27/146 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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