DRSC/TRiP Functional Genomics Resources

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Protein Alignment Corin and TMPRSS2

DIOPT Version :9

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_001128571.1 Gene:TMPRSS2 / 7113 HGNCID:11876 Length:529 Species:Homo sapiens


Alignment Length:425 Identity:142/425 - (33%)
Similarity:206/425 - (48%) Gaps:64/425 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   940 AKCERCGPDEIYCGDS-QCIGTKHICDGIIDCPYGQDERNCLRLSERNGDVGTGVLEVYRIGQRQ 1003
            :||...|   |.|..| .||...:.|||:..||.|:||..|:||...|     .:|:||...::.
Human   148 SKCSNSG---IECDSSGTCINPSNWCDGVSHCPGGEDENRCVRLYGPN-----FILQVYSSQRKS 204

  Fly  1004 WMPACVKNWDRAVSPSAVCSILGY-----------SAVNATSVLTQLTHRPLLATVNVSTDIWKM 1057
            |.|.|..:|:.... .|.|..:||           ....:||.:.       |.|...:.||:| 
Human   205 WHPVCQDDWNENYG-RAACRDMGYKNNFYSSQGIVDDSGSTSFMK-------LNTSAGNVDIYK- 260

  Fly  1058 YAKRKSTLMQEFANCKKTEDYPMADLTCSNYECGRVKRGRHKPSRRIIGGTQASPGNWPFLAAIL 1122
                  .|....|...|.    :..|.|  ..|| |.....:.| ||:||..|.||.||:..:: 
Human   261 ------KLYHSDACSSKA----VVSLRC--IACG-VNLNSSRQS-RIVGGESALPGAWPWQVSL- 310

  Fly  1123 GGPEKIFYCAGVLISDQWVLTASHCVGNYSVIDLED---WTIQLGVTRRNSFTYSGQKVKVKAVI 1184
             ..:.:..|.|.:|:.:|::||:|||..    .|.:   ||...|:.|: ||.:.|...:|:.||
Human   311 -HVQNVHVCGGSIITPEWIVTAAHCVEK----PLNNPWHWTAFAGILRQ-SFMFYGAGYQVEKVI 369

  Fly  1185 PHPQYNMAIAHDNDIALFQLATRVAFHEHLLPVCLPPPSVRNLHPGTLCTVIGWGKREDKDPKST 1249
            .||.|: :...:|||||.:|...:.|::.:.|||||.|.:. |.|..||.:.|||..|:|...|.
Human   370 SHPNYD-SKTKNNDIALMKLQKPLTFNDLVKPVCLPNPGMM-LQPEQLCWISGWGATEEKGKTSE 432

  Fly  1250 YEYIVNEVQVPIITRNQCDE--WLDNLTVSEGMVCAGFDDGGKDACQGDSGGPLLCPYPGEKNRW 1312
               ::|..:|.:|...:|:.  ..||| ::..|:||||..|..|:|||||||||:   ..:.|.|
Human   433 ---VLNAAKVLLIETQRCNSRYVYDNL-ITPAMICAGFLQGNVDSCQGDSGGPLV---TSKNNIW 490

  Fly  1313 FVGGIVSWGIMCAHPRLPGVYANVVQYVPWIQEQI 1347
            ::.|..|||..||....||||.||:.:..||..|:
Human   491 WLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQM 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060 0/1 (0%)
LDLa 945..979 CDD:238060 14/34 (41%)
SR 980..>1034 CDD:214555 14/64 (22%)
SRCR 992..1086 CDD:278931 22/104 (21%)
Tryp_SPc 1103..1343 CDD:214473 92/244 (38%)
Tryp_SPc 1104..1346 CDD:238113 93/246 (38%)
TMPRSS2NP_001128571.1 DUF3824 <44..91 CDD:289625
LDLa 150..185 CDD:238060 15/37 (41%)
SRCR_2 190..283 CDD:292133 26/119 (22%)
Tryp_SPc 292..521 CDD:214473 92/244 (38%)
Tryp_SPc 293..524 CDD:238113 93/246 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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