DRSC/TRiP Functional Genomics Resources

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Protein Alignment Corin and ctrb.2

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_001038747.1 Gene:ctrb.2 / 692313 ZFINID:ZDB-GENE-060519-7 Length:263 Species:Danio rerio


Alignment Length:247 Identity:87/247 - (35%)
Similarity:125/247 - (50%) Gaps:21/247 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly  1103 RIIGGTQASPGNWPFLAAILGGPEKIFYCAGVLISDQWVLTASHC--VGNYSVIDLEDWTIQLGV 1165
            ||:.|.:|.|.:||:..: |.......:|.|.||::.||:||:||  ..::.||        ||.
Zfish    33 RIVNGEEAVPHSWPWQVS-LQDSTGFHFCGGSLINEWWVVTAAHCNVRTSHRVI--------LGE 88

  Fly  1166 TRRNSFTYSGQKVKVKAVIPHPQYNMAIAHDNDIALFQLATRVAFHEHLLPVCLPPPSVRNLHPG 1230
            ..|:|...|.|.:.|..|..||.:|| ...:|||.|.:|||....:.|:.||||...: .|...|
Zfish    89 HDRSSNAESIQTMTVGKVFKHPNFNM-FTINNDILLIKLATPAKINTHVSPVCLAETN-DNFPGG 151

  Fly  1231 TLCTVIGWGKREDKDPKSTYEYIVNEVQVPIITRNQCDEWLDNLTVSEGMVCAGFDDGGKDACQG 1295
            ..|...|||..:...|.:  ..::.:..:|::|...|..:..| .:::.|||||  ..|..:|.|
Zfish   152 MKCVTSGWGLTKHNAPDT--PALLQQAALPLLTNEDCKRFWGN-KITDLMVCAG--ASGASSCMG 211

  Fly  1296 DSGGPLLCPYPGEKNRWFVGGIVSWGIMCAHPRLPGVYANVVQYVPWIQEQI 1347
            ||||||:|...|.   |.:.||||||.....|..|||||.|.:...|:.:.|
Zfish   212 DSGGPLVCQKDGV---WTLVGIVSWGSSVCSPSSPGVYARVTKLRAWVDQTI 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113 85/243 (35%)
ctrb.2NP_001038747.1 Tryp_SPc 34..259 CDD:238113 85/243 (35%)
Blue background indicates that the domain is not in the aligned region.

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