DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and C1rb

DIOPT Version :9

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_001106827.1 Gene:C1rb / 667277 MGIID:3779804 Length:706 Species:Mus musculus


Alignment Length:793 Identity:183/793 - (23%)
Similarity:269/793 - (33%) Gaps:262/793 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   724 LFQILINAFALLAIAGGL------------AAYFNAYPTIKFVNKTIINTIHVEDTT-------- 768
            ||.:|:..|  ..:.|.:            ..|...||:            .:|.||        
Mouse     3 LFALLVTLF--YGVEGSIYLPQKLYGEVTSPLYPKPYPS------------DLETTTVITVPMGY 53

  Fly   769 -------SFGKNPAPGTCL----------PIIVRFC------------------QGPQIPYNY-T 797
                   .|...|:.| ||          ..:.|||                  ||.::...: |
Mouse    54 RVKLVFWQFDVEPSEG-CLYDYVKISADKQTLGRFCGQLDSPLGNPPGSKEFMSQGNKMLLTFHT 117

  Fly   798 VFPN--------YIGHFGQLETQTDLD-------SYEALVDVRCYEL----VSLFLCTLF----V 839
            .|.|        |.|.....:. .|||       |.|..:..||..|    |..:.|:..    :
Mouse   118 DFSNEENGTIMFYKGFLAYYQA-VDLDECASQPNSVEEGLQPRCQHLCHNYVGGYFCSCHPGYEL 181

  Fly   840 PKCGQSGATVPPCKTLCTETM--------------------RRCGF-------------FFDVFG 871
            .|.|||      |:..|:..:                    .||.:             |.|.|.
Mouse   182 QKDGQS------CQAECSSELYTEPSGYVSSLEYPQPYPPDLRCNYSIRVERGLTVHLKFLDPFE 240

  Fly   872 LSLPEYLNCKLFKDFPSSEDCVGLDEVREVMRAATHPKCDGFQCDQNRCLPQEYVCDGHLDCMDQ 936
            :...:.::|..                 :.::...:.|..|..|.:.| .|........:|.:..
Mouse   241 IDDHQQVHCPY-----------------DQLQIYANGKNLGEFCGKQR-PPDLDTSSNAVDLLFF 287

  Fly   937 ADEAKCERCGPDEIYCGDSQCIGTK-HICDGIIDCPYGQ--DE-------------RNCLRLSER 985
            .||:            |||:  |.| |.....|.||..:  ||             |:...::.:
Mouse   288 TDES------------GDSR--GWKLHYTTETIKCPQPKALDEFTIIQDPQPQYQFRDYFTVTCK 338

  Fly   986 NG----DVGTGVLEVYRIGQRQ--W---MPAC-VKNWDRAVSPS----AVCSILGYSAVNATSVL 1036
            .|    :....:|....:.|..  |   ||.| :||..:..|.|    ...:..|.:...|:  :
Mouse   339 QGYQLMEGNQALLSFTAVCQHDGTWHRAMPRCKIKNCGQPQSLSNGDFRYITTKGVTTYEAS--I 401

  Fly  1037 TQLTHRP---LLATVNVSTDIWKMYAKRKSTLMQEFANCKKTEDYPMADLTCSNYECGRVKRGRH 1098
            ....|.|   :|.....|..:..:|.   .|....:.|.::.|..|.....|.            
Mouse   402 QYHCHEPYYKMLTRAGSSESMRGIYT---CTAQGIWKNEEEGEKMPRCLPVCG------------ 451

  Fly  1099 KP------SRRIIGGTQASPGNWPFLA-AILGGPEKIFYCAGVLISDQWVLTASHCV-------- 1148
            ||      ..|||||..|.|||:|:.| ..:.||.     .|.|:.|:|:|||:|.:        
Mouse   452 KPVNPVTQKERIIGGQPARPGNFPWQAFTTIYGPG-----GGALLGDRWILTAAHTIYPKYPNKG 511

  Fly  1149 GNYSVIDLEDWTIQLGVTRRNSFTYSGQKVKVKAVIPHPQYNMAIAHDN---DIALFQLATRVAF 1210
            .|.:...|    :.||.|........|.. .|:.||.||.|... ..||   ||||.:|...|..
Mouse   512 KNTNPRTL----VFLGHTNMEQIQKLGHH-PVRRVIIHPDYRQE-EPDNFEGDIALLELENSVTL 570

  Fly  1211 HEHLLPVCLPPPSVRNLHPGTLCTVIGWGKREDKDPKSTYEYIVNEVQVPIITRNQCDEWL---- 1271
            ...|||:|| |.:......|.:..|.|:|...::.|     :.:..|::|:..|..|..||    
Mouse   571 GPELLPICL-PDNETFYGQGLMGYVSGFGTTGNRIP-----FHLRFVRLPVADREACQRWLWTKK 629

  Fly  1272 DNLTVSEGMVCAGFDDGGKDACQGDSGGPLLCPYPGEKNR--WFVGGIVSWGIMCAHPRLPGVYA 1334
            |....|:.|.|:|.....:|||||||||....   .::||  |...|||||||.|....  |.|.
Mouse   630 DTSPFSQNMFCSGDPAVQQDACQGDSGGVFAV---RDRNRDIWVATGIVSWGIGCGEGY--GFYT 689

  Fly  1335 NVVQYVPWIQEQI 1347
            .|:.||.||::::
Mouse   690 KVLNYVDWIKKEM 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 34/200 (17%)
LDLa 911..942 CDD:238060 7/30 (23%)
LDLa 945..979 CDD:238060 12/49 (24%)
SR 980..>1034 CDD:214555 13/67 (19%)
SRCR 992..1086 CDD:278931 21/106 (20%)
Tryp_SPc 1103..1343 CDD:214473 88/257 (34%)
Tryp_SPc 1104..1346 CDD:238113 89/259 (34%)
C1rbNP_001106827.1 CUB 26..137 CDD:214483 21/123 (17%)
FXa_inhibition 160..188 CDD:291342 8/33 (24%)
CUB 192..301 CDD:278839 20/140 (14%)
Sushi 308..370 CDD:278512 11/61 (18%)
CCP 375..446 CDD:153056 13/75 (17%)
Tryp_SPc 462..698 CDD:214473 88/257 (34%)
Tryp_SPc 463..700 CDD:238113 89/258 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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