DRSC/TRiP Functional Genomics Resources

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Protein Alignment Corin and Hgfac

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_445772.1 Gene:Hgfac / 58947 RGDID:70909 Length:653 Species:Rattus norvegicus


Alignment Length:511 Identity:148/511 - (28%)
Similarity:214/511 - (41%) Gaps:107/511 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   907 HPKC----DGFQCDQNRCLPQ---EY---------VCDGHLD-CMDQADEAKCERCGPDEIYCGD 954
            |..|    .|..|...:|..:   ||         |.:||:: |.....:|:||  ......|..
  Rat   182 HCACPLAFTGKDCGTEKCFDETRYEYFEVGDHWARVSEGHVEQCSCIEGQARCE--DTHHTACLS 244

  Fly   955 SQCI--GTKHICDG----IIDCPYGQDERNC-LRLSER----NGDVGTGVLEVYRIGQRQWMPAC 1008
            |.|:  ||.|:..|    |..||.|...|.| :..:||    ||....||......|.     :|
  Rat   245 SPCLNGGTCHLIVGTGTSICACPLGYAGRFCNIVPTERCFLGNGTEYRGVASTSASGL-----SC 304

  Fly  1009 VKNWDRAVSPSAVCSILGYSAVNATSVLTQLTH----------RPLLATVNVSTDIWKMYAKRKS 1063
            :     |.:...:...|...:|.|.::|....|          ||           | .|..:.|
  Rat   305 L-----AWNSDLLYQELHVDSVGAAALLGLGPHAYCRNPDKDERP-----------W-CYVVKDS 352

  Fly  1064 TLMQEFANCKKTEDYP---------MADL----TCSNYECGRVKRGRHKPSR----RIIGGTQAS 1111
            .|..|:......|...         :|.|    :.:...||:    |||...    |||||:.:.
  Rat   353 ALSWEYCRLAACESLARVHSRIPEVLATLPESTSTARPTCGK----RHKKRTFLRPRIIGGSSSL 413

  Fly  1112 PGNWPFLAAILGGPEKIFYCAGVLISDQWVLTASHCVGNYSVIDLEDWTIQLGVTRRNSFTYSGQ 1176
            ||:.|:||||..|..   :|||.|:...||::|:||..:....|  ..|:.||....|..|...|
  Rat   414 PGSHPWLAAIYIGNG---FCAGSLVHTCWVVSAAHCFSSSPPRD--SITVVLGQHFFNRTTDVTQ 473

  Fly  1177 KVKVKAVIPHPQYNMAIAHDNDIALFQL-------ATRVAFHEHLLPVCLPPPSVRNLHPGTLCT 1234
            ...::..:|:..|::...:|:|:.|.:|       |.|..|   :.|:|||... .:...|..|.
  Rat   474 TFAIEKYVPYTLYSVFNPNDHDLVLIRLKKKGERCAVRSQF---VQPICLPEAG-SSFPTGHKCQ 534

  Fly  1235 VIGWGKREDKDPKSTYEYIVNEVQVPIITRNQCDE-WLDNLTVSEGMVCAGFDDGGKDACQGDSG 1298
            :.|||..::.  .|.|...:.|..||::..::|.. .:....:|..|:|||:.|...||||||||
  Rat   535 IAGWGHMDEN--VSGYSNSLLEALVPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSG 597

  Fly  1299 GPLLCPYPGEKNR-WFVGGIVSWGIMCAHPRLPGVYANVVQYVPWIQEQIAKHSRP 1353
            |||:|    |||. .::.||:|||..|.....||||..|..||.||.::|....||
  Rat   598 GPLVC----EKNGVAYLYGIISWGDGCGRLNKPGVYTRVSNYVDWINDRIRPPKRP 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060 10/43 (23%)
LDLa 945..979 CDD:238060 12/39 (31%)
SR 980..>1034 CDD:214555 12/57 (21%)
Tryp_SPc 1104..1346 CDD:238113 88/250 (35%)
HgfacNP_445772.1 FN2 99..145 CDD:128373
EGF_CA 159..194 CDD:238011 3/11 (27%)
FN1 197..237 CDD:238018 10/41 (24%)
EGF 242..274 CDD:394967 11/31 (35%)
Kringle 283..364 CDD:395005 19/102 (19%)
Tryp_SPc 406..641 CDD:238113 88/249 (35%)
Blue background indicates that the domain is not in the aligned region.

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