DRSC/TRiP Functional Genomics Resources

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Protein Alignment Corin and fzd8b

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_571628.1 Gene:fzd8b / 58072 ZFINID:ZDB-GENE-000328-4 Length:576 Species:Danio rerio


Alignment Length:105 Identity:32/105 - (30%)
Similarity:51/105 - (48%) Gaps:3/105 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   779 CLPIIVRFCQGPQIPYNYTVFPNYIGHFGQLETQTDLDSYEALVDVRCYELVSLFLCTLFVPKCG 843
            |..|.|..|:|  |.||||..||...|..|.|...::..:..||:::|...:..|||:::.|.|.
Zfish    31 CQEISVPLCRG--IGYNYTYMPNQFNHDNQDEAGLEVHQFWPLVEIQCSPDLRFFLCSMYTPICL 93

  Fly   844 QS-GATVPPCKTLCTETMRRCGFFFDVFGLSLPEYLNCKL 882
            :. ...:|||:::|......|......:|...|:.:.|.|
Zfish    94 EDYKKPLPPCRSVCERAKAGCAPLMRQYGFPWPDRMRCDL 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 32/105 (30%)
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113
fzd8bNP_571628.1 CRD_FZ8 27..151 CDD:143570 32/105 (30%)
7tmF_FZD8 221..530 CDD:320378
TM helix 1 230..255 CDD:320378
TM helix 2 264..285 CDD:320378
TM helix 3 314..336 CDD:320378
TM helix 4 357..373 CDD:320378
TM helix 5 395..418 CDD:320378
TM helix 6 446..471 CDD:320378
TM helix 7 491..516 CDD:320378
Blue background indicates that the domain is not in the aligned region.

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