DRSC/TRiP Functional Genomics Resources

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Protein Alignment Corin and fzd3b

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_001074070.1 Gene:fzd3b / 567746 ZFINID:ZDB-GENE-070122-1 Length:667 Species:Danio rerio


Alignment Length:168 Identity:50/168 - (29%)
Similarity:79/168 - (47%) Gaps:21/168 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   778 TCLPIIVRFCQGPQIPYNYTVFPNYIGHFGQLETQTDLDSYEALVDVRCYELVSLFLCTLFVPKC 842
            ||..|.:|.||  .:|||.|..||.:.|:.|......::.:..:|:::|...:..|||.|:.|.|
Zfish    39 TCESIGLRMCQ--DLPYNNTFMPNLLNHYDQQTAALAMEPFHPMVNLQCSPDLRPFLCALYAPVC 101

  Fly   843 GQSGATVPPCKTLCTETMRRCGFFFDVFGLSLPEYLNCKLFKD----FPSSEDCVGLDEVREVMR 903
            .:.|....||::||....|.|....|:||::.||.:.|..|.|    :|.:||.:.:|:..:...
Zfish   102 MEYGRVSLPCRSLCHHAKRDCQKLMDMFGVTWPEEMECTRFPDCDESYPRAEDLLVIDDPTDQSP 166

  Fly   904 AATHPKCDGFQCDQNRCLPQE--------YVCDGHLDC 933
            .:.. :..||.|      |:|        |...|..||
Zfish   167 MSVQ-RDYGFWC------PRELKMEPDLGYTFLGVRDC 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 40/119 (34%)
LDLa 911..942 CDD:238060 9/31 (29%)
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113
fzd3bNP_001074070.1 CRD_FZ 36..162 CDD:470581 41/124 (33%)
7tmF_FZD3 204..524 CDD:320161
TM helix 1 213..238 CDD:320161
TM helix 2 247..268 CDD:320161
TM helix 3 299..325 CDD:320161
TM helix 4 342..364 CDD:320161
TM helix 5 378..403 CDD:320161
TM helix 6 431..456 CDD:320161
TM helix 7 485..510 CDD:320161
Blue background indicates that the domain is not in the aligned region.

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