DRSC/TRiP Functional Genomics Resources

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Protein Alignment Corin and sfrp2

DIOPT Version :9

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_001070852.2 Gene:sfrp2 / 566878 ZFINID:ZDB-GENE-061013-293 Length:294 Species:Danio rerio


Alignment Length:193 Identity:50/193 - (25%)
Similarity:73/193 - (37%) Gaps:32/193 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   729 INAFALLAIAGGLAAYFNAYPTIKFVNKTIINTIHVEDTTS-FGKNPAPGTCLPIIVRFCQGPQI 792
            :.|:..|.:|..:..|.:|           ::.::..|... |.|.   ..|.||.........|
Zfish     1 MRAYLALLVALSIPGYLDA-----------LHGLYAFDQPELFQKK---SNCKPIPTNLLLCHDI 51

  Fly   793 PYNYTVFPNYIGHFGQLETQTDLDSYEALVDVRCYELVSLFLCTLFVPKC-GQSGATVPPCKTLC 856
            .|.....||.:||....|......|:..||..:|:.....|||:||.|.| ......:.||::||
Zfish    52 EYTNMRLPNLLGHETMNEVLQQASSWTPLVQKQCHPDTKKFLCSLFAPVCLDDLDEPIQPCRSLC 116

  Fly   857 TETMRRCGFFFDVFGLSLPEYLNCKLFKDFPSSED-CV---GLDEV----REVMRAATHPKCD 911
            ......|......||...|:.|:|   :.||...| |:   |.|.:    :||.|.     ||
Zfish   117 ESVKSGCAPVMAAFGFPWPDMLDC---RRFPLDNDLCIPPAGADALVPVTKEVPRV-----CD 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 35/120 (29%)
LDLa 911..942 CDD:238060 1/1 (100%)
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
SRCR 992..1086 CDD:278931
Tryp_SPc 1103..1343 CDD:214473
Tryp_SPc 1104..1346 CDD:238113
sfrp2NP_001070852.2 CRD_SFRP2 34..161 CDD:143555 38/132 (29%)
NTR_Sfrp1_like 167..294 CDD:239635 3/10 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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