DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and zmp:0000001114

DIOPT Version :9

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:XP_685356.5 Gene:zmp:0000001114 / 557248 ZFINID:ZDB-GENE-140106-74 Length:841 Species:Danio rerio


Alignment Length:1050 Identity:242/1050 - (23%)
Similarity:371/1050 - (35%) Gaps:337/1050 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   409 GSSNSSNSIGETQSQSSKEPSSVSAS---ASTSSAASAG---------------SSTISSGTMSS 455
            |.......:|..|.::|...:.::..   |....||..|               .|||...:.|:
Zfish    12 GGPEQVTFLGSNQKKASNRKTGIAIGVIIALLVVAAVVGFLVWLFVVRTKELEDQSTIEKHSSST 76

  Fly   456 M--SGPCPAVVPPTDAITKRPGPPEPPLRQA---------NVF--DPVETGSRGHPPPPLTVRNK 507
            :  ||....:.|..:...:.|..|:  .:||         :.|  ||:.  |:.:....:|..::
Zfish    77 LVYSGQIRLLKPEFNPAYENPETPQ--FQQAAKDLETIMNDTFTRDPIL--SKYYTKSVITAFSE 137

  Fly   508 LGRNKPPPITY-------PRMQQRQDSTLSSDSYSISSSPGYNSKLMEAPLLGSQQGGRKSNAPG 565
                  ..|.|       |.|.|.....:|.:            :::||.....:|.||:..   
Zfish   138 ------GTIAYHWSQFDVPEMDQEMVPQVSEE------------RVVEALRRSIRQEGRREG--- 181

  Fly   566 SAQRQTPLMDLAPTRFLGGAGGGTGSGKQGPAMPPPRSKINFRQDSTISSDSFSQTSSPGYNPKL 630
                     .:|.|     |...|.|.........|.||..|  .|..:..:..:.|||| ||| 
Zfish   182 ---------KVAVT-----ATDITASTTDPRMARDPNSKNCF--FSLTADPTTKEFSSPG-NPK- 228

  Fly   631 MEAPLLPSLSAKRLCSAPAPIVCRQGVQHEPIEELEPPQTISPLHKAAGQPSSLQTIVRFQNGAP 695
                           |.||...|:..::                   |.:.|::  ||:|:    
Zfish   229 ---------------SYPAYSRCQWQIR-------------------ANKGSAI--IVKFK---- 253

  Fly   696 HTMSLQHQIIN----------------------RRKSSNP--YITNGRLKFRLFQILINAFALLA 736
             |.:::....|                      .|..:||  .:::|.|      :|:|......
Zfish   254 -TFNIEDDCYNDFVAIYDSLSPDRSRAITKQCGLRPPTNPLEVVSSGNL------MLVNLVTDEV 311

  Fly   737 IAGGLAAYFNAYPTIKF--VNKTIINTIHVEDTTSFGKNPAPGTCLPII-----VRFCQGPQIPY 794
            ...|..|.:||.|....  ..:::     .:.|..|.....|....|.:     ::..:|..|..
Zfish   312 RKPGFRATYNAIPITPAGRCGQSL-----TDSTGEFTSPYFPSFYPPSVDCSWNIKVPEGKNIKI 371

  Fly   795 NYTVF--------PN-----YIGHFGQL----ETQTDLDSYEALVDVRCYELVSL------FLCT 836
            .:.:|        ||     ||...||.    :::..:.|...:::|:.:...|.      ...|
Zfish   372 EFNMFRLKEPGVDPNNCNKDYIEVLGQKYCGEKSRLVISSKSNVLEVKFHSDESYTDKGFKLTYT 436

  Fly   837 LFVPKCGQSGATVPPCKTLCTETMRRCGFFFDVFGLSLPEYLNCKLFKDFPSSEDCVGLDEVREV 901
            .|.|        |.||                      |....|.........:.|.|.::.:: 
Zfish   437 AFDP--------VNPC----------------------PGQFACSSGYCIRKEQLCDGWNDCQD- 470

  Fly   902 MRAATHPKC--DGFQCDQNRCLPQEYVCDGHLDCMDQADEAKCERCGPDEIYCGDSQCIGTKHIC 964
            |....:.||  |.|.|....|.||.:|||...||.|.:||..|: ||..::.||:..||....:|
Zfish   471 MSDEKNCKCNEDQFTCSNGLCRPQFFVCDRANDCGDNSDEKDCD-CGRAQVRCGNGACIMQDFVC 534

  Fly   965 DGIIDCPYGQDERNCLRLSERNGDVGTGVLEVYRIGQRQWMPACVKNWDRAVSPSAVCSILGYSA 1029
            ||..||..|.||.:|                                   |.|| .||:...:. 
Zfish   535 DGKNDCLDGSDEVSC-----------------------------------AASP-GVCNDFSFK- 562

  Fly  1030 VNATSVLTQLTHRPLLATVNVSTDIWKMYAKRKSTLMQEFANCKKTEDYPMADLTCSN------Y 1088
                                         .|.|..:.:..|.|.:.:|       ||:      .
Zfish   563 -----------------------------CKNKQCVNKVNAECDREDD-------CSDGSDEQGC 591

  Fly  1089 ECGRVKRGRHKPSRRIIGGTQASPGNWPFLAAILGGPEKIFYCAGVLISDQWVLTASHCV----G 1149
            :||.    |.....||:||..|..|.||:..: |....:...|...:||::|:|.|:||.    .
Zfish   592 DCGT----RPYKHNRIVGGQNADVGEWPWQVS-LHFKTQGHACGASIISNKWLLCAAHCFIQPDP 651

  Fly  1150 NYSVIDLEDWTIQLGVTRRNSFTYSGQKVKVKAVIPHPQYNMAIAHDNDIALFQLATRVAFHEHL 1214
            :|.:  ...|....|:..:|:...|.|...:|.:|.||.|| .:.:|.||:|.:|:..:.|...:
Zfish   652 SYKM--TSSWITYSGLRDQNTHDKSVQMRDLKTIITHPNYN-DLTNDYDISLLELSQPLNFSNTV 713

  Fly  1215 LPVCLPPPSVRNLH---PGTLCTVIGWGK-REDKDPKSTYEYIVNEVQVPIITRNQCDEWLDNLT 1275
            .|:|||..|    |   .|:.|.|.|||. ||.    .:...|:.:.:|.:|....|:      .
Zfish   714 HPICLPATS----HVFTAGSSCFVTGWGTLREG----GSAAQILQKAEVKVINDTVCN------M 764

  Fly  1276 VSEG-----MVCAGFDDGGKDACQGDSGGPLLCPYPGEKNRWFVGGIVSWGIMCAHPRLPGVYAN 1335
            |:||     |:|:|:..||.|||||||||||:|...|.|  ||..||||||..||....||||..
Zfish   765 VTEGQVTSRMMCSGYLSGGVDACQGDSGGPLVCLSEGGK--WFQAGIVSWGEGCARRNKPGVYTR 827

  Fly  1336 VVQYVPWIQE 1345
            |.:...||:|
Zfish   828 VTKLREWIRE 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 22/143 (15%)
LDLa 911..942 CDD:238060 14/30 (47%)
LDLa 945..979 CDD:238060 14/33 (42%)
SR 980..>1034 CDD:214555 5/53 (9%)
SRCR 992..1086 CDD:278931 10/93 (11%)
Tryp_SPc 1103..1343 CDD:214473 90/252 (36%)
Tryp_SPc 1104..1346 CDD:238113 91/254 (36%)
zmp:0000001114XP_685356.5 SEA 78..175 CDD:279699 20/118 (17%)
CUB 208..322 CDD:238001 29/164 (18%)
CUB 331..437 CDD:238001 16/110 (15%)
LDLa 445..477 CDD:238060 5/32 (16%)
LDLa 479..513 CDD:238060 15/33 (45%)
LDLa 515..549 CDD:238060 14/33 (42%)
LDLa 556..591 CDD:238060 8/71 (11%)
Tryp_SPc 602..835 CDD:214473 90/252 (36%)
Tryp_SPc 603..838 CDD:238113 91/254 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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