DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and prss8

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_001016980.1 Gene:prss8 / 549734 XenbaseID:XB-GENE-5758112 Length:329 Species:Xenopus tropicalis


Alignment Length:279 Identity:92/279 - (32%)
Similarity:136/279 - (48%) Gaps:40/279 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly  1083 LTCSNYECGRVKRGRHKPSRRIIGGTQASPGNWPFLAAILGGPEKIFYCAGVLISDQWVLTASHC 1147
            |..|::|.||.:.|   ...||:||..||.|.:|:.|::......:  |...|||..:::||:||
 Frog    12 LAVSHFELGRSQEG---VQSRIVGGHDASEGMFPWQASLRYDGNHV--CGAALISANFIVTAAHC 71

  Fly  1148 V-GNYSVIDLEDW--TIQLGVTRRNSFTYSGQKVKVKAVIPHPQYNMAIAHD---NDIALFQLAT 1206
            . .::|::....:  .:||||...||     |.:|:|.|..:|.|    :||   .|:|:..|.:
 Frog    72 FPSDHSLVGYSVYLGVLQLGVPSSNS-----QLLKLKQVTIYPSY----SHDTSSGDLAVAALDS 127

  Fly  1207 RVAFHEHLLPVCLPPPSVRNLHP-GTLCTVIGWGKRED--KDPKSTYEYIVNEVQVPIITRNQCD 1268
            ...|...:.|:.||..:|:  .| |..|.|.|||..:.  ..|.:....:.|   |.:|.|..|:
 Frog   128 PATFSHVVQPISLPAANVQ--FPIGMTCQVTGWGNIQQGVNLPGAKNLQVGN---VKLIGRQTCN 187

  Fly  1269 EWLDNL--------TVSEGMVCAGFDDGGKDACQGDSGGPLLCPYPGEKNRWFVGGIVSWGIMCA 1325
             .|.|:        ::...|:|||...|..|||||||||||.|...|:.   ::..:||||..|.
 Frog   188 -CLYNIKPSADSMGSIQPDMICAGSAAGSVDACQGDSGGPLTCTVNGKA---YLAAVVSWGDECG 248

  Fly  1326 HPRLPGVYANVVQYVPWIQ 1344
            ....||||..:..|..|||
 Frog   249 AQNKPGVYILISAYASWIQ 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113 85/258 (33%)
prss8NP_001016980.1 Tryp_SPc 30..269 CDD:238113 85/258 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.