DRSC/TRiP Functional Genomics Resources

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Protein Alignment Corin and LOC548809

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_001016055.2 Gene:LOC548809 / 548809 XenbaseID:XB-GENE-29098979 Length:334 Species:Xenopus tropicalis


Alignment Length:280 Identity:97/280 - (34%)
Similarity:138/280 - (49%) Gaps:27/280 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly  1084 TCSNYECGRVKRGRHKP--SRRIIGGTQASPGNWPFLAAILGGPEKIFYCAGVLISDQWVLTASH 1146
            |.|...||       .|  |.||:|||.|:.|.||:..::......|  |.|.:||:||::||:|
 Frog    43 TASPRICG-------SPLVSSRIVGGTDATNGAWPWQISLRYKGSHI--CGGSVISNQWIMTAAH 98

  Fly  1147 CVGNYSVIDLEDWTIQLGVTRRNSFTYSGQKVKVKAVIPHPQYNMAIAHDNDIALFQLATRVAFH 1211
            |. .||... .|:.:.||..:.:..:.|.....|..||.:|.:.:. ....||||.:|.:.||:.
 Frog    99 CF-EYSRTP-SDYQVLLGAYQLSVASASELLSSVARVIVNPSFTIP-GGPGDIALLKLTSPVAYT 160

  Fly  1212 EHLLPVCLPPPSVRNLHPGTLCTVIGWGKREDKDPKSTYEYIVNEVQVPIITRNQCDEWL----- 1271
            |::||||: |.|....:.|..|.|.||| .........|...:.:|..|:|:.:.|::..     
 Frog   161 EYILPVCV-PSSASGFYEGMQCWVTGWG-NIGSAVTLPYPQTLQQVMTPLISWSTCNQMYHVQSG 223

  Fly  1272 --DNLT-VSEGMVCAGFDDGGKDACQGDSGGPLLCPYPGEKNRWFVGGIVSWGIMCAHPRLPGVY 1333
              .|:. |.:..:|||:..|.||:|||||||||:|...|.   |:..||||||..||....||||
 Frog   224 ISSNIAIVPKDQICAGYAAGQKDSCQGDSGGPLVCQLQGV---WYQIGIVSWGDGCAQASRPGVY 285

  Fly  1334 ANVVQYVPWIQEQIAKHSRP 1353
            ..|..:..|:....|....|
 Frog   286 TLVPNFKSWLSSYNATTDNP 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113 88/249 (35%)
LOC548809NP_001016055.2 Tryp_SPc 58..297 CDD:238113 88/248 (35%)
Blue background indicates that the domain is not in the aligned region.

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