DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and fz

DIOPT Version :9

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_001261836.1 Gene:fz / 45307 FlyBaseID:FBgn0001085 Length:612 Species:Drosophila melanogaster


Alignment Length:752 Identity:156/752 - (20%)
Similarity:239/752 - (31%) Gaps:253/752 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   751 IKFVNKTIINTIHVEDTTSFGKNP----------APGT----------CLPIIVRFCQGPQIPYN 795
            |.|:..|:|..:...|.:....:|          :.||          |.||.:..|:  .||||
  Fly     5 ILFILPTLIQGVQRYDQSPLDASPYYRSGGGLMASSGTELDGLPHHNRCEPITISICK--NIPYN 67

  Fly   796 YTVFPNYIGHFGQLETQTDLDSYEALVDVRCYELVSLFLCTLFVPKCGQSGATVPPCKTLCTETM 860
            .|:.||.|||..|.|...::..:..||.:.|.:.:.||||:|:||.|......:|||::|| |:.
  Fly    68 MTIMPNLIGHTKQEEAGLEVHQFAPLVKIGCSDDLQLFLCSLYVPVCTILERPIPPCRSLC-ESA 131

  Fly   861 RRCGFFFDVFGLSLPEYLNCKLFKDFPSSEDCV----------GLDEVREVMRAATHPKCDGFQC 915
            |.|......:..:.||.|.|..|......:.||          .....|.|.:..|.....|.:.
  Fly   132 RVCEKLMKTYNFNWPENLECSKFPVHGGEDLCVAENTTSSASTAATPTRSVAKVTTRKHQTGVES 196

  Fly   916 DQNRCLPQEYVCDGHLDC-MDQADEAKCERCGPDEIYCGDSQCIGTKHICDGIIDCP---YGQDE 976
            .....   .:||...|.. :....|.|                :|.|.:.|....|.   :.:.|
  Fly   197 PHRNI---GFVCPVQLKTPLGMGYELK----------------VGGKDLHDCGAPCHAMFFPERE 242

  Fly   977 RNCLRLSERNGDVGTGVLEVYRIGQRQWMPACVKNW-----------------DRAVSPSAVCSI 1024
            |..||               |.:|  .|...||.:.                 :||:...|||  
  Fly   243 RTVLR---------------YWVG--SWAAVCVASCLFTVLTFLIDSSRFRYPERAIVFLAVC-- 288

  Fly  1025 LGYSAVNATSVLTQLTHRPLLATVNVSTDIWKMYAKRKSTLMQEFANCKKTEDYPMADLTCSNYE 1089
              |..|....|          |.:.....:                :|:  |.:|..        
  Fly   289 --YLVVGCAYV----------AGLGAGDSV----------------SCR--EPFPPP-------- 315

  Fly  1090 CGRVKRGRHKPSRRII-GGTQASPGNWPFLAAILGGPEKIFYCAGV------LISDQWVLTAS-- 1145
               ||.||.:....|. |..|.:.....|:|        :::|...      .::..|.|.|.  
  Fly   316 ---VKLGRLQMMSTITQGHRQTTSCTVLFMA--------LYFCCMAAFAWWSCLAFAWFLAAGLK 369

  Fly  1146 ---HCVGNYS-VIDLEDWTIQLGVTRRNSFTYSGQKVKVKAVIPHPQYNMAIAH-DNDIA----- 1200
               ..:.|.| :..|..|.:.           :.|.:.|          :|:|. :.||.     
  Fly   370 WGHEAIENKSHLFHLVAWAVP-----------ALQTISV----------LALAKVEGDILSGVCF 413

  Fly  1201 LFQLATRVAFHEHLLPVCLPPPSVRNLHPGTLCTVIGW-------------GKREDKDPKSTYEY 1252
            :.||.|.......:||:|:      .|..|.|..:.|:             |||.||     .|.
  Fly   414 VGQLDTHSLGAFLILPLCI------YLSIGALFLLAGFISLFRIRTVMKTDGKRTDK-----LER 467

  Fly  1253 IVNEVQ-------VPIITRNQC--------DEWLDNLTVSEGMVCAGFDDGGKDACQGDSGGPLL 1302
            ::..:.       :|.:....|        |||:              ....:|.|:..|   :.
  Fly   468 LMLRIGFFSGLFILPAVGLLGCLFYEYYNFDEWM--------------IQWHRDICKPFS---IP 515

  Fly  1303 CP---YPGEKNRWFVGGIVSWGIMCAHPRLPGVYANVVQY-----VPW---IQEQIAKHSRPIKE 1356
            ||   .||......:..|.....:|:  .|.||.::|..|     |.|   ::....|..|...:
  Fly   516 CPAARAPGSPEARPIFQIFMVKYLCS--MLVGVTSSVWLYSSKTMVSWRNFVERLQGKEPRTRAQ 578

  Fly  1357 DRVNKYDLHPGGPDILSKIATDPMREGAPHHYTHSRT 1393
            ..| .|:..|.|....:.:..||  |.|...|....|
  Fly   579 AYV-XYETGPAGGAKSTPLTPDP--EAANESYLEFST 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 43/135 (32%)
LDLa 911..942 CDD:238060 5/31 (16%)
LDLa 945..979 CDD:238060 6/36 (17%)
SR 980..>1034 CDD:214555 14/70 (20%)
SRCR 992..1086 CDD:278931 17/110 (15%)
Tryp_SPc 1103..1343 CDD:214473 56/297 (19%)
Tryp_SPc 1104..1346 CDD:238113 56/299 (19%)
fzNP_001261836.1 CRD_FZ1_like 51..167 CDD:143567 42/118 (36%)
Frizzled 237..564 CDD:279827 81/445 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.