DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and CG11841

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_651661.1 Gene:CG11841 / 43430 FlyBaseID:FBgn0039628 Length:319 Species:Drosophila melanogaster


Alignment Length:312 Identity:86/312 - (27%)
Similarity:134/312 - (42%) Gaps:58/312 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1079 PMADLTCSNYE--------------------------CGRVKRGRHKPSRRIIGGTQASPGNWPF 1117
            |.|.|.|:.::                          |       |.....|:.||.|.|..:||
  Fly    28 PFAQLACTKFKQIVFEERVAISFFFTDAPITYETVDSC-------HGSRPLIVDGTPAEPKEFPF 85

  Fly  1118 LAAILG----GPEKIFYCAGVLISDQWVLTASHCV----GNYSVIDLEDWTIQLGVTRRNSFTYS 1174
             ||.||    ..|..::|.|.|||::.||||:||.    |..:|       ::||....::.|..
  Fly    86 -AARLGHRKTNNEIKWFCGGTLISNRLVLTAAHCFFSEHGEVNV-------VRLGELEFDTDTDD 142

  Fly  1175 G--QKVKVKAVIPHPQYNMAIAHDNDIALFQLATRVAFHEHLLPVCLPPPSVRNLHPGTLCTVIG 1237
            .  :...|.|:..||.:.....: |||.:.||...|.|:.:..|.|||...... |...:  .||
  Fly   143 AEPEDFGVLALKAHPGFENPQLY-NDIGIVQLDREVKFNRYKHPACLPFDDGEQ-HESFI--AIG 203

  Fly  1238 WGKRE--DKDPKSTYEYIVNEVQVPIITRNQCDEWLDNLTVSEGMVCAGFDDGGKDACQGDSGGP 1300
            ||:::  .|:.|...:..:...:...::....::.|.|....:..:|.|..| .||.|.||||||
  Fly   204 WGQKKFAQKESKKLLKVQLQGYKDRCVSSVDANDELPNGYEPKSQLCIGSRD-NKDTCNGDSGGP 267

  Fly  1301 LLCPYPGEKNRWFVGGIVSWGIMCAHPRLPGVYANVVQYVPWIQEQIAKHSR 1352
            :|..:......:.|.||.|.||.|:.|.:|..|..|..::.||:.::||.::
  Fly   268 VLAYHKDLACMYHVMGITSAGITCSTPDIPSAYTRVHYFLNWIKGELAKQTQ 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113 78/253 (31%)
CG11841NP_651661.1 Tryp_SPc 72..311 CDD:238113 77/251 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.