DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and CG5255

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster


Alignment Length:269 Identity:74/269 - (27%)
Similarity:120/269 - (44%) Gaps:32/269 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly  1103 RIIGGTQASPGNWPFLAAILGGPEKIFYCAGVLISDQWVLTASHCVGNYSVIDLEDWTIQLGVTR 1167
            ||:||.:|:.|..|:..::.|.......|.|.:|.::|::||:||............|....:.:
  Fly    29 RIVGGEEAAAGLAPYQISLQGIGSGAHSCGGAIIDERWIITAAHCTRGRQATAFRVLTGTQDLHQ 93

  Fly  1168 RNSFTYSGQKVKVKAVIPHPQYNMAIAHDNDIALFQLATRVAFHEHLLPVCLPPPSVRNLHPGTL 1232
            ..|..|...:     ::.|..| ....:.|||||..|...:.|.....||.|...:   |.||:.
  Fly    94 NGSKYYYPDR-----IVEHSNY-APRKYRNDIALLHLNESIVFDNATQPVELDHEA---LVPGSR 149

  Fly  1233 CTVIGWGKRE---DKDPKSTYEYIVNEVQVPIITRNQCDEWLDNLT-VSEGMVCAGFDDGGKDAC 1293
            ..:.|||...   |...:      :..::|..:...||....||.| |..|.||. |:|.|:.||
  Fly   150 LLLTGWGTLSLGGDVPAR------LQSLEVNYVPFEQCRAAHDNSTRVDIGHVCT-FNDKGRGAC 207

  Fly  1294 QGDSGGPLLCPYPGEKNRWFVGGIVSWGIMCAHPRLPGVYANVVQYVPWIQEQIA----KHSRPI 1354
            .|||||||:  :.|:     :..:|:||:.|| ...|..:|::..|..:|:..::    ..|..|
  Fly   208 HGDSGGPLV--HNGK-----LVALVNWGLPCA-KGYPDAHASISYYHDFIRTHLSLSKTDSSEDI 264

  Fly  1355 KEDRVNKYD 1363
            :|:.:...|
  Fly   265 EEEMIALQD 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113 69/245 (28%)
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 69/243 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.