DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and CG5246

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster


Alignment Length:270 Identity:82/270 - (30%)
Similarity:124/270 - (45%) Gaps:43/270 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1087 NYECGRVKRGRHKPSRRIIGGTQASPGNWPFLAAILG--GPEKIFYCAGVLISDQWVLTASHCVG 1149
            |:..|.|     ||..|:|||..:..|..|:..:|:.  |..   .|.|.:|:.||:|||:||: 
  Fly    30 NHHLGHV-----KPETRVIGGVDSPTGFAPYQVSIMNTFGEH---VCGGSIIAPQWILTAAHCM- 85

  Fly  1150 NYSVIDLEDWTIQL--GVTRRNSFTYSGQKVKVKAVIPHPQYNMAIAHDNDIALFQLATRVAFHE 1212
                    :|.||.  .||....:|..|.:..|.....|..::.. |:.|||||...|..:.:.:
  Fly    86 --------EWPIQYLKIVTGTVDYTRPGAEYLVDGSKIHCSHDKP-AYHNDIALIHTAKPIVYDD 141

  Fly  1213 HLLPVCLPP----PSVRNLHPGTLCTVIGWGKREDKDPKSTYEYIVNEVQVPIITRNQCDEWLDN 1273
            ...|:.|..    |.|     |...|:.|||..:.....||.   :.::.:..|..:.|...:.|
  Fly   142 LTQPIKLASKGSLPKV-----GDKLTLTGWGSTKTWGRYSTQ---LQKIDLNYIDHDNCQSRVRN 198

  Fly  1274 LT-VSEGMVCAGFDDGGKDACQGDSGGPLLCPYPGEKNRWFVGGIVSWGIMCAHPRLPGVYANVV 1337
            .. :|||.||. |...|:.:|.|||||||:     :.|:..| |:|:||..|| ...|.|:.:|.
  Fly   199 ANWLSEGHVCT-FTQEGEGSCHGDSGGPLV-----DANQTLV-GVVNWGEACA-IGYPDVFGSVA 255

  Fly  1338 QYVPWIQEQI 1347
            .|..||::.:
  Fly   256 YYHDWIEQMM 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113 76/250 (30%)
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 76/249 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.