DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and snk

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster


Alignment Length:404 Identity:122/404 - (30%)
Similarity:186/404 - (46%) Gaps:66/404 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   974 QDERNCLRLSERNGDVGTGVLEVYRIGQRQWMPACVKNWDRAVSPSAVCSILGYSA--------V 1030
            :||.:.|:..: :.:|.|.|.|....|     ..|.:::|   ..|..| ||.|..        |
  Fly    65 EDEESYLKFGD-DAEVRTSVSEGLHEG-----AFCRRSFD---GRSGYC-ILAYQCLHVIREYRV 119

  Fly  1031 NATSVLTQLTHR---PLLATVNVSTDIWKMYAKRKSTLMQEFANCKKTEDYPMADLTCSNYECGR 1092
            :.|.: ...|||   |::......          |..|.|.. :..|.::|..|.......:.||
  Fly   120 HGTRI-DICTHRNNVPVICCPLAD----------KHVLAQRI-SATKCQEYNAAARRLHLTDTGR 172

  Fly  1093 VKRGRH-KPS-RRIIGGTQASPGNWPFLAAI---LGGPEK----IFYCAGVLISDQWVLTASHCV 1148
            ...|:. .|| ..|:|||....|.:|.:||:   .|...|    .:.|.|.|:|:.:||||:||.
  Fly   173 TFSGKQCVPSVPLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCA 237

  Fly  1149 GNYS-VIDLEDWTIQLGVTRRNSFTYSGQKVKVKAVIPHPQYNMAIAHDNDIALFQLATRVAFHE 1212
            .:.| ..|:    ::||..:.|..:.:.|.:|:..::.||:|..: |:.:||||.:|..||.|.|
  Fly   238 TSGSKPPDM----VRLGARQLNETSATQQDIKILIIVLHPKYRSS-AYYHDIALLKLTRRVKFSE 297

  Fly  1213 HLLPVCL-PPPSVRNLHPGTLCTVI--GWGKREDKDPKSTYEYIVNEVQVPIITRNQCDEWLDN- 1273
            .:.|.|| ..|.::      :.||:  |||:.|....||.   .:.:|.:.::.:..|.:.... 
  Fly   298 QVRPACLWQLPELQ------IPTVVAAGWGRTEFLGAKSN---ALRQVDLDVVPQMTCKQIYRKE 353

  Fly  1274 ----LTVSEGMVCAGFDDGGKDACQGDSGGPLLCPYPGEKNRWFVGGIVSWGIMCAHPRLPGVYA 1334
                ..:.||..|||:..||:|.||||||||:....|......||.||.|:|..||.|..||||.
  Fly   354 RRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYT 418

  Fly  1335 NVVQYVPWIQEQIA 1348
            .:..|:.|| |:||
  Fly   419 RLYSYLDWI-EKIA 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060 2/4 (50%)
SR 980..>1034 CDD:214555 14/61 (23%)
Tryp_SPc 1104..1346 CDD:238113 87/257 (34%)
snkNP_524338.2 CLIP 93..139 CDD:197829 13/50 (26%)
Tryp_SPc 186..430 CDD:238113 88/258 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.