DRSC/TRiP Functional Genomics Resources

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Protein Alignment Corin and Tmprss11c

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_001399454.1 Gene:Tmprss11c / 408213 RGDID:1302967 Length:431 Species:Rattus norvegicus


Alignment Length:302 Identity:104/302 - (34%)
Similarity:156/302 - (51%) Gaps:38/302 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly  1057 MYAKRKS--TLMQEFANCKKTE-DYPMA-DL--TCSNYECGR--VKRGRHKPSRRIIGGTQASPG 1113
            :|.|.||  .|:.:.::.|.:: ..|:| ||  ||    |||  :..|.||    :.||..|..|
  Rat   153 LYQKLKSQTRLLIDSSSFKFSDIAMPIAEDLLNTC----CGRRTITPGGHK----VAGGQDAEEG 209

  Fly  1114 NWPFLAAILGGPEKIFYCAGVLISDQWVLTASHCVGNYSVIDLEDWTIQLGVTRRNSFTYSGQKV 1178
            .||:.|::  ....:..|...|||:.|::||:||....:  :.:||.:..|      |..|..:.
  Rat   210 EWPWQASL--QQNNVHRCGATLISNSWLITAAHCFVRSA--NPKDWKVSFG------FLLSKPQA 264

  Fly  1179 K--VKAVIPHPQYNMAIAHDNDIALFQLATRVAFHEHLLPVCLPPPSVRNLHPGTLCTVIGWGK- 1240
            :  ||:::.|..|:.. ||:||||:.:|::.|.:..::...|| |.:.:...|.:...|.|||. 
  Rat   265 QRAVKSIVIHENYSYP-AHNNDIAVVRLSSPVLYENNIRRACL-PEATQKFPPNSDVVVTGWGTL 327

  Fly  1241 REDKDPKSTYEYIVNEVQVPIITRNQCDEW-LDNLTVSEGMVCAGFDDGGKDACQGDSGGPLLCP 1304
            :.|.|..:    |:.:.:|.||....|:.. .....::.||:||||.:|..|||||||||||:. 
  Rat   328 KSDGDSPN----ILQKGRVKIIDNKTCNSGKAYGGVITPGMLCAGFLEGRVDACQGDSGGPLVS- 387

  Fly  1305 YPGEKNRWFVGGIVSWGIMCAHPRLPGVYANVVQYVPWIQEQ 1346
             ...|..||:.||||||..||.|..||||..|..|..||..:
  Rat   388 -EDSKGIWFLAGIVSWGDECALPNKPGVYTRVTHYRDWISSK 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113 86/245 (35%)
Tmprss11cNP_001399454.1 SEA 62..161 CDD:460188 4/7 (57%)
Tryp_SPc 200..428 CDD:238113 86/245 (35%)
Blue background indicates that the domain is not in the aligned region.

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