DRSC/TRiP Functional Genomics Resources

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Protein Alignment Corin and Tmprss4

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:XP_038937788.1 Gene:Tmprss4 / 367074 RGDID:1305033 Length:478 Species:Rattus norvegicus


Alignment Length:411 Identity:130/411 - (31%)
Similarity:192/411 - (46%) Gaps:54/411 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   948 DEIY--CGDS-QCIGTKHICDGIIDCPYGQDERNCLR-LSERNG-------DVGTGVLEVYRIGQ 1001
            |:.|  ||:. ..|....:|||.:||..|:||.:|:: ..|:.|       |..|  |:|....:
  Rat    99 DKYYFICGNPLTFIPRGQMCDGHLDCASGEDEEHCVKNFPEKPGVTVRLSKDRST--LQVLDAAR 161

  Fly  1002 RQWMPACVKNWDRAVSPSAVCSILGYSAVNATSVLTQLTHRPLLAT-VNVSTDIWKMYAKRKSTL 1065
            ..|...|..|:..|::.:| |..:||::..|...:....::.||.| |..::...:|....:|.|
  Rat   162 GTWASVCFDNFTEALAKTA-CRQMGYNSQPAFGPVEMGPNQTLLVTPVTGNSQELQMQNGSRSCL 225

  Fly  1066 MQEFANCKKTEDYPMADLTCSNYECGRVKRGRHKPSRRIIGGTQASPGNWPFLAAILGGPEKIFY 1130
            ...           :..|.|  .:||:..:     :.|::||.:||..:||:..:|....:.:  
  Rat   226 SGS-----------LVSLRC--LDCGKSLK-----TTRVVGGVEASADSWPWQVSIQYNKQHV-- 270

  Fly  1131 CAGVLISDQWVLTASHCVGNYSVIDLEDWTIQLGVTRRNSFTYSGQKVKVKAVIPHPQYNMAIAH 1195
            |.|.::...|:|||:||...|  :|:..|.::.|   .|....|......|..|..|  |.....
  Rat   271 CGGSILDHHWILTAAHCFRKY--LDVSSWKVRAG---SNKLGNSPSLPVAKIFIAEP--NPLQPK 328

  Fly  1196 DNDIALFQLATRVAFHEHLLPVCLPPPSVRNLHPGTLCTVIGWGKREDKDPKSTYEYIVNEVQVP 1260
            :.||||.:|...:.|...:.|:|| |.|...|.|.....|||||..|:...|.:...:...||| 
  Rat   329 EKDIALVKLKMPLTFSGSVRPICL-PFSDEELIPTMPVWVIGWGFTEENGGKMSDTLLQASVQV- 391

  Fly  1261 IITRNQC---DEWLDNLTVSEGMVCAGFDDGGKDACQGDSGGPLLCPYPGEKNRWFVGGIVSWGI 1322
             |...:|   |.:...:|.  ||:|||...||||.|||||||||:..|    ::|.|.||||||.
  Rat   392 -IDSARCNAEDAYQGEVTA--GMLCAGTPQGGKDTCQGDSGGPLMYHY----DKWQVVGIVSWGY 449

  Fly  1323 MCAHPRLPGVYANVVQYVPWI 1343
            .|..|..||||..|..|:.||
  Rat   450 GCGSPSTPGVYTKVTAYLDWI 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060 13/33 (39%)
SR 980..>1034 CDD:214555 15/61 (25%)
Tryp_SPc 1104..1346 CDD:238113 89/243 (37%)
Tmprss4XP_038937788.1 LDLa 99..133 CDD:238060 13/33 (39%)
SRCR_2 149..238 CDD:470597 22/104 (21%)
Tryp_SPc 245..470 CDD:214473 88/242 (36%)
Blue background indicates that the domain is not in the aligned region.

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