DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and LOC3290448

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:XP_321900.4 Gene:LOC3290448 / 3290448 VectorBaseID:AGAMI1_012340 Length:271 Species:Anopheles gambiae


Alignment Length:272 Identity:72/272 - (26%)
Similarity:113/272 - (41%) Gaps:55/272 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1100 PSR---RIIGGTQASPGNWPFLAAILGGPEKIFY--CAGVLISDQWVLTASHCVGNYSVIDLEDW 1159
            |:|   ||:||.:...|.:|:..::    |...|  |....::.:..|||.||....:..||   
Mosquito    28 PARATGRIVGGWEVYIGQFPYQLSL----EYDGYHICGASAVAPRLALTAGHCCIGTNETDL--- 85

  Fly  1160 TIQLGVTRRNSFTYSGQKVKVKAVIPHPQY---NMAIAHDNDIAL------FQLATRVAFHEHLL 1215
            |::.|   .::....|....||.::.||.|   |:    |.|:.:      ||....:..     
Mosquito    86 TVRGG---SSTLEEGGIVFPVKKLVIHPDYDDSNL----DFDVCVLRIGGTFQNKPNIGI----- 138

  Fly  1216 PVCLPPPSVRNLHPGTLCTVIGWGKREDKDPKSTYEYIVNEVQVPI---ITRNQCDEWLDNLTVS 1277
               :.|.|...:..|.|..|.|||..|     |...::.|...:.:   .|:|..|:..:.:|.|
Mosquito   139 ---IQPTSSGTIPSGELAIVTGWGATE-----SNGNFVPNLRSLAVKVWSTKNCTDQAANYMTSS 195

  Fly  1278 EGMVCAGFDDGGKDACQGDSGGPLLCPYPGEKNRWFVGGIVSWGIMCAHPRLPGVYANVV--QYV 1340
            ..|:|||  ..|:..|.|||||||:  |...:.     ||||:.|.......|.:|..:.  ...
Mosquito   196 GSMMCAG--SVGRSFCVGDSGGPLV--YDQRQI-----GIVSFLINECGGTAPAIYTRLSHRSVR 251

  Fly  1341 PWIQEQIAKHSR 1352
            .:|::||....|
Mosquito   252 DFIRQQINNDQR 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113 66/257 (26%)
LOC3290448XP_321900.4 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.