DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and LOC3290023

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:XP_556332.4 Gene:LOC3290023 / 3290023 VectorBaseID:AGAMI1_005833 Length:297 Species:Anopheles gambiae


Alignment Length:253 Identity:77/253 - (30%)
Similarity:119/253 - (47%) Gaps:20/253 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly  1103 RIIGGTQASPGNWPF-LAAILGGPEKIFYCAGVLISDQWVLTASHCVGNYSVIDLEDWTIQLGVT 1166
            |::.|.:|.||.:|: :|.:|..|:....|.|.:::..::|||:|||...|...:......:|..
Mosquito    56 RVVNGQEALPGQFPYQVALLLNFPDGTALCGGSVLTRNFILTAAHCVSATSTTLVSGGIAIMGAH 120

  Fly  1167 RRNSFTYSGQKVKVKA--VIPHPQYNMAIAHDNDIALFQLATRVAFHEHLLPVCLPPPSVRNLHP 1229
            .|.:...|.|:::..:  :..||:|:..... ||:||..|.:.:.|...:.|:.||..:......
Mosquito   121 NRTAMELSQQRIRFTSTGIRRHPEYDDTSLR-NDVALILLNSPMTFTSRVKPISLPARTDTRQFE 184

  Fly  1230 GTLCTVIGWGKREDKD--PKSTYEYIVNEVQVPIITRNQC-DEWLDNLTVSEGMVCAGFDDGGKD 1291
            |...||.|:|:..|..  |.|...:..|    ||:::.:| ..|...|..|:. ||.. ..||:.
Mosquito   185 GFTGTVSGFGRSSDASPYPSSILRFTSN----PIMSKAECIVSWGFALAQSQN-VCLK-PTGGRS 243

  Fly  1292 ACQGDSGGPLLCPYPGEKNRWFVGGIVSWGIM--CAHPRLPGVYANVVQYVPWIQEQI 1347
            :|.|||||||.....|....    |.||:|..  || ...|.|||.|...:.||.|.|
Mosquito   244 SCNGDSGGPLTVNSGGVLQI----GTVSFGSSYGCA-SGWPSVYARVSYVLSWINENI 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113 74/249 (30%)
LOC3290023XP_556332.4 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.