DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Corin and LOC3290022

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:XP_556335.4 Gene:LOC3290022 / 3290022 VectorBaseID:AGAMI1_011283 Length:300 Species:Anopheles gambiae


Alignment Length:262 Identity:79/262 - (30%)
Similarity:117/262 - (44%) Gaps:41/262 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1100 PSRRIIGGTQASPGNWPFLAAIL------GGPEKIFYCAGVLISDQWVLTASHCV---------G 1149
            ||.||..|.:|:||.:||..|::      .|     .|.|.:::..::|||:|||         |
Mosquito    52 PSHRITNGQEATPGQFPFQIALISEFASGNG-----LCGGSVLTRNFILTAAHCVVSGASTLASG 111

  Fly  1150 NYSVIDLEDWTIQLGVTRRNSFTYSGQKVKVKAVIPHPQYNMAIAHDNDIALFQLATRVAFHEHL 1214
            ..:::...:..:|....:|..|..||       :..||.|:.:... ||||..:|.:.:.|...:
Mosquito   112 GVAIMGAHNRNVQESTQQRIRFATSG-------IRRHPSYSSSTLR-NDIATVRLNSPMTFTTRI 168

  Fly  1215 LPVCLPPPSVRNLHPGTLCTVIGWGKREDKDPKSTYEYIVNEVQVPIITRNQC-DEWLDNLTVSE 1278
            .|:.||..|......|...||.|:|:  ..|..|....:|.....|::|...| ..|  ..||..
Mosquito   169 QPIRLPGRSDTRQFGGFTGTVSGFGR--TSDASSATSAVVRFTTNPVMTNTDCIARW--GSTVVN 229

  Fly  1279 GMVCAGFDDGGKDACQGDSGGPLLCPYPGEKNRWFVGGIVSWGIM--CAHPRLPGVYANVVQYVP 1341
            ..||.. ..||:.:|.|||||||.....|....    |:||:|.:  || ..:|.|||.|..::.
Mosquito   230 QHVCLS-GAGGRSSCNGDSGGPLTVQSGGTMQI----GVVSFGSVNGCA-IGMPSVYARVTFFLD 288

  Fly  1342 WI 1343
            ||
Mosquito   289 WI 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113 76/258 (29%)
LOC3290022XP_556335.4 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.