DRSC/TRiP Functional Genomics Resources

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Protein Alignment Corin and Sfrp2

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_001094170.1 Gene:Sfrp2 / 310552 RGDID:735163 Length:295 Species:Rattus norvegicus


Alignment Length:169 Identity:44/169 - (26%)
Similarity:62/169 - (36%) Gaps:39/169 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   780 LPIIVRFCQGPQIPYNYTVFPNYIGHFGQLETQTDLDSYEALVDVRCYELVSLFLCTLFVPKC-G 843
            :|..::.|.|  |.|.....||.:||....|......::..||..:|:.....|||:||.|.| .
  Rat    43 IPANLQLCHG--IEYQNMRLPNLLGHETMKEVLEQAGAWIPLVMKQCHPDTKKFLCSLFAPVCLD 105

  Fly   844 QSGATVPPCKTLCTETMRRCGFFFDVFGLSLPEYLNCKLFKDFPSSEDCVGLDEVREVMRAATHP 908
            ....|:.||.:||.:...||......||...|:.|                              
  Rat   106 DLDETIQPCHSLCVQVKDRCAPVMSAFGFPWPDML------------------------------ 140

  Fly   909 KCDGFQCDQNRCLPQEYVCDGHLDCMDQADEAK--CERC 945
            :||.|..|.:.|:|  .....||  :...:||.  ||.|
  Rat   141 ECDRFPQDNDLCIP--LASSDHL--LPPTEEAPKVCEAC 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 31/114 (27%)
LDLa 911..942 CDD:238060 9/32 (28%)
LDLa 945..979 CDD:238060 1/1 (100%)
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113
Sfrp2NP_001094170.1 CRD_SFRP2 36..163 CDD:143555 39/155 (25%)
NTR_Sfrp1_like 169..295 CDD:239635 3/7 (43%)
Blue background indicates that the domain is not in the aligned region.

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