DRSC/TRiP Functional Genomics Resources

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Protein Alignment Corin and Tmprss3

DIOPT Version :9

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:XP_038954650.1 Gene:Tmprss3 / 309665 RGDID:1310135 Length:454 Species:Rattus norvegicus


Alignment Length:430 Identity:131/430 - (30%)
Similarity:200/430 - (46%) Gaps:59/430 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   930 HLDCMDQADEAKCERCGPDEIYCGDSQCIGTKHICDGIIDCPYGQDERNCLRLSERNGDVGTGVL 994
            |.||   :.:.:|.         ...:||.....|||:.:|..|:||..|:|:|.:.     ..|
  Rat    70 HFDC---SGKYRCH---------SSFKCIELTARCDGVPNCKDGEDEYRCVRVSGQR-----AAL 117

  Fly   995 EVYRIGQRQWMPACVKNWDRAVSPSAVCSILGY-SAVNATSVLTQLTHRPL---LATVNVSTDIW 1055
            :|:...  .|...|..:|....:..| |:.||: |.|::..:.........   ..::|......
  Rat   118 QVFTAA--AWRTMCSDDWKSHYAKIA-CAQLGFPSYVSSDHLRVDALEEQFQGDFVSINHLLPDD 179

  Fly  1056 KMYAKRKSTLMQEFANCKKTEDYPMADLTCSNYECGRVKRGRHKPSRRIIGGTQASPGNWPFLAA 1120
            |:.|...|..|:|  .|....   :..|.||  .||  .|..:.|  ||:||..:|...||:..:
  Rat   180 KVTALHHSVYMRE--GCTSGH---VVTLKCS--ACG--MRTGYSP--RIVGGNVSSLTQWPWQVS 233

  Fly  1121 ILGGPEKIFYCAGVLISDQWVLTASHCVGNYSVIDLEDWTIQLG-VTRRNSFTYSGQKVKVKAVI 1184
            :..  :....|.|.:|:..|::||:|||  |.:...:.||:|:| |:..:|...|.   .|:.:|
  Rat   234 LQF--QGYHLCGGSVITPLWIVTAAHCV--YDLYHPKSWTVQVGLVSLMDSPVPSH---LVEKII 291

  Fly  1185 PHPQYNMAIAHDNDIALFQLATRVAFHEHLLPVCLPPPSVRNLHPGTLCTVIGWGKRE----DKD 1245
            .|.:|... ...|||||.:|:..:.|.|.:.|:|| |.|..|...|.||...|||..|    |..
  Rat   292 YHSKYKPK-RLGNDIALMKLSEPLTFDETIQPICL-PNSEENFPDGKLCWTSGWGATEDGAGDAS 354

  Fly  1246 PKSTYEYIVNEVQVPIITRNQCDEW-LDNLTVSEGMVCAGFDDGGKDACQGDSGGPLLCPYPGEK 1309
            |      ::|...||:|:...|:.. :....:|..|:|||:..||.|:|||||||||:|.   |:
  Rat   355 P------VLNHAAVPLISNKICNHRDVYGGIISPSMLCAGYLKGGVDSCQGDSGGPLVCQ---ER 410

  Fly  1310 NRWFVGGIVSWGIMCAHPRLPGVYANVVQYVPWIQEQIAK 1349
            ..|.:.|..|:||.||....||||..:..::.||.||:.:
  Rat   411 RLWKLVGATSFGIGCAEVNKPGVYTRITSFLDWIHEQLER 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060 3/11 (27%)
LDLa 945..979 CDD:238060 9/33 (27%)
SR 980..>1034 CDD:214555 13/54 (24%)
SRCR 992..1086 CDD:278931 19/97 (20%)
Tryp_SPc 1103..1343 CDD:214473 86/245 (35%)
Tryp_SPc 1104..1346 CDD:238113 87/247 (35%)
Tmprss3XP_038954650.1 LDLa 74..107 CDD:238060 10/41 (24%)
SRCR_2 112..211 CDD:406055 23/115 (20%)
Tryp_SPc 216..444 CDD:214473 86/245 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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