DRSC/TRiP Functional Genomics Resources

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Protein Alignment Corin and Cela3b

DIOPT Version :10

Sequence 1:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_001100162.1 Gene:Cela3b / 298567 RGDID:1307819 Length:269 Species:Rattus norvegicus


Alignment Length:276 Identity:85/276 - (30%)
Similarity:130/276 - (47%) Gaps:38/276 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly  1090 CGRVKRGRHKPSRRIIGGTQASPGNWPFLAAILGGPEKIFY--CAGVLISDQWVLTASHCVG--- 1149
            ||:..   :.||.|::.|..|.|.:||:..::....:..|:  |.|.||:..||:||.||:.   
  Rat    17 CGQPS---YNPSSRVVNGEDAVPYSWPWQVSLQYEKDGSFHHTCGGTLIAPDWVMTAGHCISTSR 78

  Fly  1150 NYSVIDLEDWTIQLGVTRRNSFTYSGQKVKVKA--VIPHPQYNM-AIAHDNDIALFQLATRVAFH 1211
            .|.|:        ||...|.......|.:.|.|  :..||::|. .::..|||||.:|:......
  Rat    79 TYQVV--------LGEFERGVEEGPEQVIPVNAGDLFVHPKWNSNCVSCGNDIALVKLSRSAQLG 135

  Fly  1212 EHLLPVCLPPPSVRNLHPGTLCTVIGWGKREDKDPKSTYEYIVNEVQ---VPIITRNQCDEWLD- 1272
            :.:...||||.. ..|..|..|.:.|||:.....|      :.:::|   :|::....|.:| | 
  Rat   136 DTVQLACLPPAG-EILPNGAPCYISGWGRLSTNGP------LPDKLQQALLPVVDYAHCSKW-DW 192

  Fly  1273 -NLTVSEGMVCAGFDDGGKDACQGDSGGPLLCPYPGEKNRWFVGGIVSW--GIMCAHPRLPGVYA 1334
             ..:|.:.|||||.|.  :..|.|||||||.|  |.|...|.|.|:.|:  .:.|...:.|.|:.
  Rat   193 WGFSVKKTMVCAGGDI--QSGCNGDSGGPLNC--PAENGTWQVHGVTSFVSSLGCNTLKKPTVFT 253

  Fly  1335 NVVQYVPWIQEQIAKH 1350
            .|..:..||:|.||.:
  Rat   254 RVSAFNEWIEETIANN 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113 77/256 (30%)
Cela3bNP_001100162.1 Tryp_SPc 28..265 CDD:238113 77/256 (30%)
Blue background indicates that the domain is not in the aligned region.

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